RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ADAMTS5Q9UNA0 930 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC22A13Q9Y226 551 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 CDIPTO14735 213 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 GPX5O75715 221 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 CLDN1O95832 211 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 CDKN2BP42772 138 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 SOX2P48431 317 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 RHOAP61586 193 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 FAM162BQ5T6X4 162 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM220Q6QAJ8 160 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM107Q6UX40 140 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 BATF2Q8N1L9 274 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 SIDT2Q8NBJ9 832 aaKnown RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 DHRS4Q9BTZ2 278 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 TXNRD2Q9NNW7 524 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 SOX21Q9Y651 276 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 SHANK3Q9BYB0 1731 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 IQCF5A8MTL0 148 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 GPR25O00155 361 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF354AO60765 605 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 HPRT1P00492 218 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 HOXC4P09017 264 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC10A3P09131 477 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 LIPCP11150 499 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 CAV2P51636 162 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF140P52738 457 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 PAFAH1B2P68402 229 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 CTBSQ01459 385 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 MEF2DQ14814 521 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 HLA-BQ31612 363 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF429Q86V71 674 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 MOB3AQ96BX8 217 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 WDR89Q96FK6 387 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 RAB11FIP5Q9BXF6 653 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 C1QTNF3Q9BXJ4 246 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 TBC1D3BA6NDS4 549 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 B4DEV8 164 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 C22orf46C9J442 243 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 ECI2O75521 394 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 F12P00748 615 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 TGFAP01135 160 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 FABP2P12104 132 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 PSMB4P28070 264 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 UFM1P61960 85 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 IRF9Q00978 393 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 JOSD1Q15040 202 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 UBE2NLQ5JXB2 153 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 FAM69BQ5VUD6 431 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 TBC1D3GQ6DHY5 549 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM192Q8IY95 271 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 OR11H7Q8NGC8 314 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 OR5AP2Q8NGF4 316 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 CD99L2Q8TCZ2 262 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 HARBI1Q96MB7 349 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 LRRC3BQ96PB8 259 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 OR52D1Q9H346 318 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 IGFLR1Q9H665 355 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 AHSPQ9NZD4 102 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 LHX6Q9UPM6 363 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 A6NIN4 97 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 COL5A3P25940 1745 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 RPIAP49247 311 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 MTNR1BP49286 362 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 CAV3P56539 151 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 CACNA1SQ13698 1873 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF774Q6NX45 483 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 GLDNQ6ZMI3 551 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 LRP11Q86VZ4 500 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 C17orf78Q8N4C9 275 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 FAM89BQ8N5H3 189 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 C1orf127Q8N9H9 656 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 HJURPQ8NCD3 748 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 MRAP2Q96G30 205 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 PDLIM5Q96HC4 596 aaKnown RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 TOX2Q96NM4 488 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 FEVQ99581 238 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 OR10A5Q9H207 317 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 THSD1Q9NS62 852 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF724A8MTY0 619 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 J3QLW9 94 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 MPC2O95563 127 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 RAB40ALP0C0E4 278 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF19P17023 458 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 UQCRC2P22695 453 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 GJA4P35212 333 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 PIGAP37287 484 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 GSG1Q2KHT4 349 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 SOWAHCQ53LP3 525 aaPredicted RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 LAMTOR1Q6IAA8 161 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 CMTM4Q8IZR5 234 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 AGBL5Q8NDL9 886 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 OR5AU1Q8NGC0 362 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 CRYGNQ8WXF5 182 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 RAB40AQ8WXH6 277 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM106AQ96A25 262 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 TRMT61AQ96FX7 289 aaKnown RBP6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 SDSLQ96GA7 329 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 ACY3Q96HD9 319 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 BOCQ9BWV1 1114 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 TLNRD1Q9H1K6 362 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms