RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 DUSP5Q16690 384 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 DEFB109BQ30KR1 87 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 TMEM185AQ8NFB2 350 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 ARPC5LQ9BPX5 153 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 DEFB127Q9H1M4 99 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 SAV1Q9H4B6 383 aaPredicted RBP6.73□□□□□ -1.33
SSR1-201ENST00000244763 DLL4Q9NR61 685 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 TBX21Q9UL17 535 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 RNF150Q9ULK6 438 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 HRH3Q9Y5N1 445 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 A0A0U1RQS6 177 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 TRDV1A0A1B0GX56 115 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 SULT1C4O75897 302 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 IGLV3-27P01718 113 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 ELK1P19419 428 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 CDONQ4KMG0 1287 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 SYT9Q86SS6 491 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 UTP4Q969X6 686 aaKnown RBP6.73□□□□□ -1.33
SSR1-201ENST00000244763 S1PR5Q9H228 398 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 ERVMER34-1Q9H9K5 563 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 DOCK2Q92608 1830 aa6.73□□□□□ -1.33
SSR1-201ENST00000244763 ZNF705FA8MVS1 300 aaPredicted RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 POU2F2P09086 479 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 ZNF705DP0CH99 300 aaPredicted RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 ZNF705BP0CI00 300 aaPredicted RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 GLRA1P23415 457 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 TMEM207Q6UWW9 146 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 PLXDC2Q6UX71 529 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 YRDCQ86U90 279 aaKnown RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 ETFBKMTQ8IXQ9 262 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 RCE1Q9Y256 329 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 PCDHGA5Q9Y5G8 931 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 XKRY2A2RUG3 117 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 P2RY10O00398 339 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 ARHGAP33O14559 1287 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 KLK10O43240 276 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 MYOGP15173 224 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 PTPN6P29350 595 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 AQP6Q13520 282 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 DOC2BQ14184 412 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 KHDC1LQ5JSQ8 128 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 RTN4RL1Q86UN2 441 aaPredicted RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 ZFP82Q8N141 532 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 GON7Q9BXV9 100 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 TXNL4BQ9NX01 149 aaKnown RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 SFXN4Q6P4A7 337 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 TMEM200AQ86VY9 491 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 CDC20BQ86Y33 519 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 ADGRG3Q86Y34 549 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 RNF141Q8WVD5 230 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 CMTM3Q96MX0 182 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 FOXN4Q96NZ1 517 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 GNB4Q9HAV0 340 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 LAMA4Q16363 1823 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 FRG2CA6NGY1 282 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 TNFRSF1AP19438 455 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 DUSP1P28562 367 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 EDDM3AQ14507 147 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 Q6ZSR9 355 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 SVBPQ8N300 66 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 LINC01465Q8N7H1 131 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 HSD17B8Q92506 261 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 QRSL1Q9H0R6 528 aaKnown RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 CHST8Q9H2A9 424 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 PTGER1P34995 402 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 ZNF85Q03923 595 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 SMAD2Q15796 467 aaKnown RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 GLYATL3Q5SZD4 288 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 LFNGQ8NES3 379 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 ZDHHC16Q969W1 377 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 FAM3DQ96BQ1 224 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 SCPEP1Q9HB40 452 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 TMEM165Q9HC07 324 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 ECM29Q5VYK3 1845 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 ACOD1A6NK06 481 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 AKR7A3O95154 331 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 RNPS1Q15287 305 aaKnown RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 SLC9A3R2Q15599 337 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 VRK3Q8IV63 474 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 CRLF2Q9HC73 371 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 POM121BA6NF01 834 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 LGALS8O00214 317 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 IMPA2O14732 288 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 PRKACAP17612 351 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 CAPZBP47756 277 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 GABRA4P48169 554 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 GAB1Q13480 694 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 LINC00299Q6ZSB3 139 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 SLC16A11Q8NCK7 471 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 M1APQ8TC57 530 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 KISS1RQ969F8 398 aaPredicted RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 ISL2Q96A47 359 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.72□□□□□ -1.33
SSR1-201ENST00000244763 NPAP1Q9NZP6 1156 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 COA3Q9Y2R0 106 aaPredicted RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 FAM166BA8MTA8 275 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 HOXD12P35452 270 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 ACVR1Q04771 509 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.72□□□□□ -1.33
SSR1-201ENST00000244763 SLC36A1Q7Z2H8 476 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms