RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 OTPQ5XKR4 325 aa20.77■□□□□ 0.92
MSX2-201ENST00000239243 MZT2BQ6NZ67 158 aa20.77■□□□□ 0.92
MSX2-201ENST00000239243 STAC2Q6ZMT1 411 aa20.77■□□□□ 0.92
MSX2-201ENST00000239243 ZNF433Q8N7K0 673 aaPredicted RBP20.77■□□□□ 0.92
MSX2-201ENST00000239243 PIGQQ9BRB3 760 aa20.77■□□□□ 0.92
MSX2-201ENST00000239243 TRBV5-7A0A0A0MS05 114 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 MASP2O00187 686 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 PGA4P0DJD7 388 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 PGA3P0DJD8 388 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 NR2C1P13056 603 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 CD97P48960 835 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 PITPNAQ00169 270 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 ACER2Q5QJU3 275 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 ZNF468Q5VIY5 522 aaPredicted RBP20.77■□□□□ 0.91
MSX2-201ENST00000239243 OR7E24Q6IFN5 339 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 DCXRQ7Z4W1 244 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 WDFY1Q8IWB7 410 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 OR5H6Q8NGV6 325 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 TMEM106AQ96A25 262 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 WACQ9BTA9 647 aa20.77■□□□□ 0.91
MSX2-201ENST00000239243 GPR179Q6PRD1 2367 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 OR2M5A3KFT3 312 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 TRABD2BA6NFA1 517 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 GJE1A6NN92 205 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 ZIC3O60481 467 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 UBE2NLQ5JXB2 153 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 MDGA2Q7Z553 956 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 RAB43Q86YS6 212 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 IGKV1D-43A0A0B4J1Z2 117 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 G3V3Y1 287 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 PLA2G10O15496 165 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 TLX3O43711 291 aaPredicted RBP20.76■□□□□ 0.91
MSX2-201ENST00000239243 LAP3P28838 519 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 DLSTP36957 453 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 MAGEB1P43366 347 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 CSNK2A1P68400 391 aaPredicted RBP20.76■□□□□ 0.91
MSX2-201ENST00000239243 HACD4Q5VWC8 232 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 CELF2-AS1Q8N7Q2 184 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 IL17RDQ8NFM7 739 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 ENKURQ8TC29 256 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 ST7LQ8TDW4 575 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 CHAC2Q8WUX2 184 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 TSEN15Q8WW01 171 aaKnown RBP20.76■□□□□ 0.91
MSX2-201ENST00000239243 ORAI1Q96D31 301 aa20.76■□□□□ 0.91
MSX2-201ENST00000239243 A0A087WV48 116 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 ZNF726A6NNF4 738 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 SLC43A1O75387 559 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 UBL3O95164 117 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 VAMP5O95183 116 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 FREM3P0C091 2139 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 RAC1P63000 192 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 JMJD6Q6NYC1 403 aaPredicted RBP20.75■□□□□ 0.91
MSX2-201ENST00000239243 SPATC1Q76KD6 591 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 CATSPERDQ86XM0 798 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 LGALS14Q8TCE9 139 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 NEDD4LQ96PU5 975 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 GFI1Q99684 422 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 NAA11Q9BSU3 229 aaPredicted RBP20.75■□□□□ 0.91
MSX2-201ENST00000239243 GTF2A1LQ9UNN4 478 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 R4GMQ9 66 aa20.75■□□□□ 0.91
MSX2-201ENST00000239243 A0A1W2PNU3 283 aaPredicted RBP20.74■□□□□ 0.91
MSX2-201ENST00000239243 SRD5A2P31213 254 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 MAP2K3P46734 347 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 H3F3AP84243 136 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 CAMK2DQ13557 499 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 B3GNTL1Q67FW5 361 aaPredicted RBP20.74■□□□□ 0.91
MSX2-201ENST00000239243 MCHR2Q969V1 340 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 RFT1Q96AA3 541 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 ZC3HAV1LQ96H79 300 aaKnown RBP20.74■□□□□ 0.91
MSX2-201ENST00000239243 NPAP1Q9NZP6 1156 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 SDK2Q58EX2 2172 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 CALCBP10092 127 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 CYB561P49447 251 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 HES3Q5TGS1 186 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 DHRS13Q6UX07 377 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 C11orf40Q8WZ69 217 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 HDHD2Q9H0R4 259 aa20.74■□□□□ 0.91
MSX2-201ENST00000239243 RBFOX1Q9NWB1 397 aaKnown RBP20.74■□□□□ 0.91
MSX2-201ENST00000239243 ANXA2P2A6NMY6 339 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 ZNF814B7Z6K7 855 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 PNPP00491 289 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 ANXA2P07355 339 aaKnown RBP20.73■□□□□ 0.91
MSX2-201ENST00000239243 HES5Q5TA89 166 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.73■□□□□ 0.91
MSX2-201ENST00000239243 RDH10Q8IZV5 341 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 PCDHGA9Q9Y5G4 932 aaKnown RBP20.73■□□□□ 0.91
MSX2-201ENST00000239243 CD2P06729 351 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 DNASE1L1P49184 302 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 ODF4Q2M2E3 257 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 ZNF57Q68EA5 555 aaPredicted RBP20.73■□□□□ 0.91
MSX2-201ENST00000239243 LRRTM1Q86UE6 522 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 LINC00346Q8IVM7 164 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 OR51A4Q8NGJ6 313 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 OR10AC1Q8NH08 325 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 RNF133Q8WVZ7 376 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 HPS1Q92902 700 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 THAP7Q9BT49 309 aaPredicted RBP20.73■□□□□ 0.91
MSX2-201ENST00000239243 ANKRD10Q9NXR5 420 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 CYB5R1Q9UHQ9 305 aa20.73■□□□□ 0.91
MSX2-201ENST00000239243 A0A0B4J203 849 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms