RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 LSRQ86X29 649 aaPredicted RBP9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 CHERPQ8IWX8 916 aaKnown RBP9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 ASB17Q8WXJ9 295 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 PGAM5Q96HS1 289 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 MNTQ99583 582 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 MOV10Q9HCE1 1003 aaKnown RBP9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 EPG5Q9HCE0 2579 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 TUBAL3A6NHL2 446 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 KLF4O43474 513 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 UBL3O95164 117 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 CXCR4P61073 352 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF91Q05481 1191 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 OCLNQ16625 522 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 C4orf17Q53FE4 359 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 C20orf196Q8IYI0 205 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 RACGAP1Q9H0H5 632 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 PLEKHA1Q9HB21 404 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 KCNG2Q9UJ96 466 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 PKD1L2Q7Z442 2459 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 PNMA8CA0A1B0GUJ8 204 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF716A6NP11 495 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 M0R1B8 84 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 DOK2O60496 412 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 ATE1O95260 518 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 HTR1AP08908 422 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 CLUP10909 449 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 RAB1AP62820 205 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 H3F3AP84243 136 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 GSG1Q2KHT4 349 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 TBC1D28Q2M2D7 210 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF829Q3KNS6 432 aaPredicted RBP9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 ANKRD16Q6P6B7 361 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF322Q6U7Q0 402 aaPredicted RBP9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF676Q8N7Q3 588 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 C11orf40Q8WZ69 217 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 SNX18Q96RF0 628 aa9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 NR1H4Q96RI1 486 aaPredicted RBP9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 FOXD3Q9UJU5 478 aaPredicted RBP9.84□□□□□ -0.83
TNFAIP3-201ENST00000237289 TNRC6AQ8NDV7 1962 aaKnown RBP9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 A0A1W2PR80 420 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 DENRO43583 198 aaKnown RBP9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 TXNDC12O95881 172 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 CRYAAP02489 173 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 CCDC159P0C7I6 412 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 ASCL1P50553 236 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 TDGF1P3P51864 188 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 SLC16A9Q7RTY1 509 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 DCXRQ7Z4W1 244 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR6V1Q8N148 313 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 PIAS4Q8N2W9 510 aaPredicted RBP9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 NPEPL1Q8NDH3 523 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR4F15Q8NGB8 312 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZG16O60844 167 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 CLPTM1O96005 669 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 PGA4P0DJD7 388 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 PGA3P0DJD8 388 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 EDNRAP25101 427 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 Q6ZT83 130 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 CXorf67Q86X51 503 aaPredicted RBP9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 BBS1Q8NFJ9 593 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR51B6Q9H340 312 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 IGKV3D-15A0A087WSY6 115 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 SLC1A7O00341 560 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 SELENOFO60613 162 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 IL18BPO95998 194 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR2T7P0C7T2 308 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 CD79BP40259 229 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 FOXF2Q12947 444 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 ETFDHQ16134 617 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 MEP1BQ16820 701 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 TIGD6Q17RP2 521 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR2T27Q8NH04 317 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 TRIM36Q9NQ86 728 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 ELOVL5Q9NYP7 299 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 B3GAT1Q9P2W7 334 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 FBXL3Q9UKT7 428 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 AMDHD2Q9Y303 409 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 B4DXG7 233 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 PSMD9O00233 223 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 LCKP06239 509 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 ECH1Q13011 328 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 SMN1Q16637 294 aaKnown RBP9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 CORO6Q6QEF8 472 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR5L1Q8NGL2 311 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 KCNK17Q96T54 332 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 MND1Q9BWT6 205 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 LRRC42Q9Y546 428 aa9.83□□□□□ -0.84
TNFAIP3-201ENST00000237289 ABHD16AO95870 558 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 HLA-HP01893 362 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 GCH1P30793 250 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 TUBA1BP68363 451 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 TUBA4AP68366 448 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 RUNX1T1Q06455 604 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 AQP6Q13520 282 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF324BQ6AW86 544 aaPredicted RBP9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 TUBA1AQ71U36 451 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 SLC22A24Q8N4F4 322 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 TSEN15Q8WW01 171 aaKnown RBP9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 LINC00470Q9BZP3 86 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 ACTR6Q9GZN1 396 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms