RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 DCXRQ7Z4W1 244 aa15.52■□□□□ 0.08
VRK1-201ENST00000216639 ZNF554Q86TJ5 538 aa15.52■□□□□ 0.08
VRK1-201ENST00000216639 PRSS35Q8N3Z0 413 aa15.52■□□□□ 0.08
VRK1-201ENST00000216639 IL22RA1Q8N6P7 574 aa15.52■□□□□ 0.08
VRK1-201ENST00000216639 ADAMTS17Q8TE56 1095 aa15.52■□□□□ 0.08
VRK1-201ENST00000216639 PPP1R3EQ9H7J1 279 aa15.52■□□□□ 0.08
VRK1-201ENST00000216639 LRFN1Q9P244 771 aa15.52■□□□□ 0.08
VRK1-201ENST00000216639 BOKQ9UMX3 212 aaPredicted RBP15.52■□□□□ 0.08
VRK1-201ENST00000216639 MRPS18CQ9Y3D5 142 aaKnown RBP15.52■□□□□ 0.08
VRK1-201ENST00000216639 LRP12Q9Y561 859 aa15.52■□□□□ 0.08
VRK1-201ENST00000216639 MRPS18BQ9Y676 258 aaKnown RBP15.52■□□□□ 0.08
VRK1-201ENST00000216639 IGKV1D-43A0A0B4J1Z2 117 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 A0A1W2PQ09 198 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 TRABD2BA6NFA1 517 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 ZNF814B7Z6K7 855 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 CSF3P09919 207 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 SLC2A2P11168 524 aaPredicted RBP15.51■□□□□ 0.07
VRK1-201ENST00000216639 CD82P27701 267 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 AIMP2Q13155 320 aaKnown RBP15.51■□□□□ 0.07
VRK1-201ENST00000216639 OR7E24Q6IFN5 339 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.51■□□□□ 0.07
VRK1-201ENST00000216639 WDFY1Q8IWB7 410 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 Q8N402 240 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 SNRNP27Q8WVK2 155 aaKnown RBP15.51■□□□□ 0.07
VRK1-201ENST00000216639 C11orf40Q8WZ69 217 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 FER1L6-AS2Q96M78 137 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 MRI1Q9BV20 369 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 B3GAT2Q9NPZ5 323 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 ETAA1Q9NY74 926 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 MALT1Q9UDY8 824 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 TBC1D24Q9ULP9 559 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 GTF2A1LQ9UNN4 478 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 A0A0G2JMM0 328 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 A0A1B0GTH9 108 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 A0A1W2PPB8 328 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 A0A1W2PPL8 197 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 A0A1W2PRS3 328 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 KIR3DP1A8MWS1 328 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 NPIPA2E9PIF3 369 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 NPIPA3F8WFD2 350 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 ATF1P18846 271 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 ITGA3P26006 1051 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 SOX2P48431 317 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 POU4F3Q15319 338 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 CARD17Q5XLA6 110 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 C19orf18Q8NEA5 215 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 DEFB124Q8NES8 71 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 ZNF671Q8TAW3 534 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 ST7LQ8TDW4 575 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 TSEN15Q8WW01 171 aaKnown RBP15.51■□□□□ 0.07
VRK1-201ENST00000216639 CMTM3Q96MX0 182 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 UTP23Q9BRU9 249 aaKnown RBP15.51■□□□□ 0.07
VRK1-201ENST00000216639 ZFP64Q9NPA5 681 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 BRD7Q9NPI1 651 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 R4GMQ9 66 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 V9GY05 133 aa15.51■□□□□ 0.07
VRK1-201ENST00000216639 KIR3DL2P43630 455 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 CLDN17P56750 224 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 ASAH1Q13510 395 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 GDPD3Q7L5L3 318 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 SYT9Q86SS6 491 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 YRDCQ86U90 279 aaKnown RBP15.5■□□□□ 0.07
VRK1-201ENST00000216639 ZNF227Q86WZ6 799 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 LINC00346Q8IVM7 164 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 ZNF433Q8N7K0 673 aaPredicted RBP15.5■□□□□ 0.07
VRK1-201ENST00000216639 CLEC1AQ8NC01 280 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 NKD1Q969G9 470 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 SLC25A18Q9H1K4 315 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 C1orf198Q9H425 327 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 SPATA2Q9UM82 520 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 GPR179Q6PRD1 2367 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 PCSK5Q92824 1860 aa15.5■□□□□ 0.07
VRK1-201ENST00000216639 TRBV5-7A0A0A0MS05 114 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 LRRC3CA6NJW4 275 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 AIPO00170 330 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 TNFSF11O14788 317 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 RAMP1O60894 148 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 TRAPPC6AO75865 159 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 EIF4EP06730 217 aaKnown RBP15.49■□□□□ 0.07
VRK1-201ENST00000216639 HNRNPCP07910 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
VRK1-201ENST00000216639 H2BFMP0C1H6 154 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 FTH1P19P0C7X4 201 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 CD96P40200 585 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 PITPNBP48739 271 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 INPP1P49441 399 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 B3GALT5-AS1P59052 145 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 GABREP78334 506 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 HIST3H3Q16695 136 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 ODF4Q2M2E3 257 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 SLC25A47Q6Q0C1 308 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 CCBE1Q6UXH8 406 aaPredicted RBP15.49■□□□□ 0.07
VRK1-201ENST00000216639 STAC2Q6ZMT1 411 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 CATSPERDQ86XM0 798 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 MCHR2Q969V1 340 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 TMEM106AQ96A25 262 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 SFXN2Q96NB2 322 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 FAM173AQ9BQD7 235 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 SLC22A4Q9H015 551 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 SEC61A2Q9H9S3 476 aa15.49■□□□□ 0.07
VRK1-201ENST00000216639 POLR1DQ9Y2S0 133 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms