RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 H7C1C5 153 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 ST8SIA3O43173 380 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 SPP1P10451 314 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 RBP2P50120 134 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 RAB35Q15286 201 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 MANEAQ5SRI9 462 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 C11orf87Q6NUJ2 197 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 LCN15Q6UWW0 184 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 OR13C5Q8NGS8 318 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 SECTM1Q8WVN6 248 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 ZNF331Q9NQX6 463 aaPredicted RBP9.6□□□□□ -0.87
VCL-201ENST00000211998 KCNIP2Q9NS61 270 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 C17orf105B2RV13 164 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 CD3DP04234 171 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 RFC3P40938 356 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 KCNJ3P48549 501 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 REEP5Q00765 189 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 PHLDA2Q53GA4 152 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 MRPL2Q5T653 305 aaKnown RBP9.6□□□□□ -0.87
VCL-201ENST00000211998 LGI3Q8N145 548 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 C9orf62Q8N4C0 152 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 ACOT4Q8N9L9 421 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 LMNTD1Q8N9Z9 388 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 RPUSD4Q96CM3 377 aaKnown RBP9.6□□□□□ -0.87
VCL-201ENST00000211998 SMIM14Q96QK8 99 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 PRR14Q9BWN1 585 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 CSNK1G1Q9HCP0 422 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 SLC35D1Q9NTN3 355 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 MOKQ9UQ07 419 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 ITGB8P26012 769 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 MMP15P51511 669 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 ZNF66Q6ZN08 573 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 RBM45Q8IUH3 476 aaKnown RBP9.6□□□□□ -0.87
VCL-201ENST00000211998 CLEC1AQ8NC01 280 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 WDFY2Q96P53 400 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 MACROD1Q9BQ69 325 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 SGPP1Q9BX95 441 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 C1QTNF6Q9BXI9 259 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 FKRPQ9H9S5 495 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 A4GALTQ9NPC4 353 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 KLK11Q9UBX7 282 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 IL17BQ9UHF5 180 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 KCNG2Q9UJ96 466 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 CCDC88AQ3V6T2 1871 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 A0A1W2PPH5 198 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 LRP3O75074 770 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 ADAMTS4O75173 837 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 CLDN1O95832 211 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 SOD1P00441 154 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 CRYBA1P05813 215 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 GABRA2P47869 451 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 CNN3Q15417 329 aaKnown RBP9.6□□□□□ -0.87
VCL-201ENST00000211998 TOMM34Q15785 309 aaPredicted RBP9.6□□□□□ -0.87
VCL-201ENST00000211998 DEFB110Q30KQ9 67 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 FAHD1Q6P587 224 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 KIAA1958Q8N8K9 716 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 OR14A16Q8NHC5 309 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 ABHD5Q8WTS1 349 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 GCDHQ92947 438 aaPredicted RBP9.6□□□□□ -0.87
VCL-201ENST00000211998 TSLPQ969D9 159 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 ADIPOR1Q96A54 375 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 MARVELD1Q9BSK0 173 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 NXF2Q9GZY0 626 aaKnown RBP9.6□□□□□ -0.87
VCL-201ENST00000211998 CXorf36Q9H7Y0 433 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 SLC25A37Q9NYZ2 338 aa9.6□□□□□ -0.87
VCL-201ENST00000211998 RGPD8O14715 1765 aaPredicted RBP9.6□□□□□ -0.87
VCL-201ENST00000211998 ZNF320A2RRD8 509 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 PYCARD-AS1I3L0S3 204 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 NPBWR1P48145 328 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 AADACL3Q5VUY0 350 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 HSD11B1LQ7Z5J1 315 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 LINC00518Q8N0U6 118 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 SLC22A24Q8N4F4 322 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 SMIM4Q8WVI0 70 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 ZFPM2Q8WW38 1151 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 ASB11Q8WXH4 323 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 ZNF845Q96IR2 970 aaPredicted RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 TOX2Q96NM4 488 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 SMIM7Q9BQ49 75 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 RTP3Q9BQQ7 232 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 ZDHHC11Q9H8X9 412 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 WDR76Q9H967 626 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 UCK1Q9HA47 277 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 CGGBP1Q9UFW8 167 aaPredicted RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 RPH3ALQ9UNE2 315 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 H3BQ06 376 aaPredicted RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 SELENOFO60613 162 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 IL5P05113 134 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 MMP7P09237 267 aaPredicted RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 TEAD1P28347 426 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 MPGP29372 298 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 PRAMEF8Q5VWM4 474 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 PRAMEF7Q5VXH5 474 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 LYSMD4Q5XG99 296 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 GDF7Q7Z4P5 450 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 TEAD3Q99594 435 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 LMF2Q9BU23 707 aaKnown RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 RBM24Q9BX46 236 aaKnown RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 PCDHGA9Q9Y5G4 932 aaKnown RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 hCG_1809904A0A1W2PP81 198 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms