RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 KLHL26Q53HC5 615 aa13.61□□□□□ -0.23
EFNB1-201ENST00000204961 UNQ6126/PRO20091Q6UXV3 157 aa13.61□□□□□ -0.23
EFNB1-201ENST00000204961 SLC16A9Q7RTY1 509 aa13.61□□□□□ -0.23
EFNB1-201ENST00000204961 SYS1Q8N2H4 156 aa13.61□□□□□ -0.23
EFNB1-201ENST00000204961 SLC2A12Q8TD20 617 aa13.61□□□□□ -0.23
EFNB1-201ENST00000204961 DMRTA2Q96SC8 542 aa13.61□□□□□ -0.23
EFNB1-201ENST00000204961 SOX7Q9BT81 388 aa13.61□□□□□ -0.23
EFNB1-201ENST00000204961 POFUT1Q9H488 388 aa13.61□□□□□ -0.23
EFNB1-201ENST00000204961 OR4C45A6NMZ5 311 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 MASP2O00187 686 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 ZNF205O95201 554 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 POU3F1Q03052 451 aaPredicted RBP13.6□□□□□ -0.23
EFNB1-201ENST00000204961 SEZ6L2Q6UXD5 910 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 KLHL15Q96M94 604 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 AIFM2Q9BRQ8 373 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 ELL3Q9HB65 397 aaPredicted RBP13.6□□□□□ -0.23
EFNB1-201ENST00000204961 SUSD5O60279 629 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 GDF9O60383 454 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 HOXD4P09016 255 aaPredicted RBP13.6□□□□□ -0.23
EFNB1-201ENST00000204961 NAGAP17050 411 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 AVPR2P30518 371 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 SFTPDP35247 375 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 RABIFP47224 123 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 EFNA3P52797 238 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 AP3S2P59780 193 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 CLLU1Q5K131 121 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 OR13C3Q8NGS6 347 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 GPBAR1Q8TDU6 330 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 HAVCR1Q96D42 359 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 ZNF426Q9BUY5 554 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 GPN1Q9HCN4 374 aaPredicted RBP13.6□□□□□ -0.23
EFNB1-201ENST00000204961 PIPOXQ9P0Z9 390 aa13.6□□□□□ -0.23
EFNB1-201ENST00000204961 RPH3AQ9Y2J0 694 aaPredicted RBP13.6□□□□□ -0.23
EFNB1-201ENST00000204961 GLI4P10075 376 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 CALCBP10092 127 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 CDAP32320 146 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 CDCP2Q5VXM1 449 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 DCXRQ7Z4W1 244 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 ATG4DQ86TL0 474 aaPredicted RBP13.59□□□□□ -0.23
EFNB1-201ENST00000204961 HAVCR2Q8TDQ0 301 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 MFFQ9GZY8 342 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 CUTCQ9NTM9 273 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 HAO2Q9NYQ3 351 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 PRODH2Q9UF12 536 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 MSRAQ9UJ68 235 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 CLDN16Q9Y5I7 305 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 ESPL1Q14674 2120 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 CPED1A4D0V7 1026 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 RAB3DO95716 219 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 GP1BBP13224 206 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 ALOX5APP20292 161 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 PTBP1P26599 531 aaKnown RBP eCLIP13.59□□□□□ -0.23
EFNB1-201ENST00000204961 RAB11BQ15907 218 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 GLDNQ6ZMI3 551 aaPredicted RBP13.59□□□□□ -0.23
EFNB1-201ENST00000204961 RTL10Q7L3V2 364 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 WDFY1Q8IWB7 410 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 SCARF2Q96GP6 870 aaPredicted RBP13.59□□□□□ -0.23
EFNB1-201ENST00000204961 FOXQ1Q9C009 403 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 WBP1LQ9NX94 342 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 ICAM5Q9UMF0 924 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 hCG_1807616A0A1W2PRN6 198 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 RPL35P42766 123 aaKnown RBP13.59□□□□□ -0.23
EFNB1-201ENST00000204961 C3orf33Q6P1S2 294 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 ZNF615Q8N8J6 731 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 TSTD1Q8NFU3 115 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 OR1J2Q8NGS2 313 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 OR13C9Q8NGT0 318 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 MIB2Q96AX9 1013 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 FGGYQ96C11 551 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 ZNF75AQ96N20 296 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 ACTR6Q9GZN1 396 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 COPZ2Q9P299 210 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 PCOLCE2Q9UKZ9 415 aa13.59□□□□□ -0.23
EFNB1-201ENST00000204961 MRPS18BQ9Y676 258 aaKnown RBP13.59□□□□□ -0.23
EFNB1-201ENST00000204961 CNOT1A5YKK6 2376 aaKnown RBP13.58□□□□□ -0.23
EFNB1-201ENST00000204961 EP300Q09472 2414 aaPredicted RBP13.58□□□□□ -0.24
EFNB1-201ENST00000204961 IGKV1D-43A0A0B4J1Z2 117 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 GGT3PA6NGU5 568 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 EFCAB7A8K855 629 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 C2CD4DB7Z1M9 353 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 CTAG2O75638 210 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 RLN2P04090 185 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 IFNGR1P15260 489 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 SPINK2P20155 84 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 RBM34P42696 430 aaKnown RBP13.58□□□□□ -0.24
EFNB1-201ENST00000204961 BAMBIQ13145 260 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 SKP2Q13309 424 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 ZCCHC12Q6PEW1 402 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 COX15Q7KZN9 410 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 MRPL48Q96GC5 212 aaKnown RBP13.58□□□□□ -0.24
EFNB1-201ENST00000204961 ABHD6Q9BV23 337 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 ZNF471Q9BX82 626 aaPredicted RBP13.58□□□□□ -0.24
EFNB1-201ENST00000204961 BANF2Q9H503 90 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 SESN1Q9Y6P5 492 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 KIR2DS5A0A0G2JLQ3 304 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 A0A0G2JNG1 304 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 A0A1W2PNR3 127 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 KIR2DS3K7RE56 304 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 FOLR1P15328 257 aa13.58□□□□□ -0.24
EFNB1-201ENST00000204961 ZNF823P16415 610 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms