RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TMEM106AQ96A25 262 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 C8orf44Q96CB5 159 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 ZNF501Q96CX3 271 aaPredicted RBP11.83□□□□□ -0.52
CTNS-201ENST00000046640 INTS14Q96SY0 518 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 EXOSC3Q9NQT5 275 aaKnown RBP11.83□□□□□ -0.52
CTNS-201ENST00000046640 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.52
CTNS-201ENST00000046640 RABL2AQ9UBK7 228 aaPredicted RBP11.83□□□□□ -0.52
CTNS-201ENST00000046640 FREM3P0C091 2139 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 hCG_1807616A0A1W2PRN6 198 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 PDCD5O14737 125 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 ITGA10O75578 1167 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 OR6A2O95222 327 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 ECDO95905 644 aaPredicted RBP11.83□□□□□ -0.52
CTNS-201ENST00000046640 TGM6O95932 706 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 WNT11O96014 354 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 BGLAPP02818 100 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 LPLP06858 475 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 GALNSP34059 522 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 EFNB2P52799 333 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 AP3S2P59780 193 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 CDC20BQ86Y33 519 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 ADGRG3Q86Y34 549 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 OR51D1Q8NGF3 324 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 ZNF417Q8TAU3 575 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 MRPL48Q96GC5 212 aaKnown RBP11.83□□□□□ -0.52
CTNS-201ENST00000046640 ZNF587Q96SQ5 575 aaPredicted RBP11.83□□□□□ -0.52
CTNS-201ENST00000046640 MED11Q9P086 117 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 A0A1B0GUH1 482 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 SPDEFO95238 335 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 PGCP20142 388 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 ALOX5APP20292 161 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 RAG2P55895 527 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 IL10RAQ13651 578 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 DCAF12L2Q5VW00 463 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 TMEM81Q6P7N7 255 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 UNQ9370/PRO34162Q6UXP9 181 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 ZNF574Q6ZN55 896 aaPredicted RBP11.82□□□□□ -0.52
CTNS-201ENST00000046640 BOLLQ8N9W6 283 aaKnown RBP11.82□□□□□ -0.52
CTNS-201ENST00000046640 OR2G2Q8NGZ5 317 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 ARL5BQ96KC2 179 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 OR6C1Q96RD1 312 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 PTDSS2Q9BVG9 487 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 CHST6Q9GZX3 395 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 ZCCHC4Q9H5U6 513 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 ELOVL3Q9HB03 270 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 AKAP7Q9P0M2 348 aaPredicted RBP11.82□□□□□ -0.52
CTNS-201ENST00000046640 FBXO9Q9UK97 447 aaPredicted RBP11.82□□□□□ -0.52
CTNS-201ENST00000046640 PI4KAP42356 2102 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 TRAV36DV7A0A075B6V5 113 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 PLSCR5A0PG75 271 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 ANKRD20A5PA0PJZ0 165 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 ALG1L2C9J202 215 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 MCRIP1C9JLW8 97 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 H3BML4 177 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 GPRIN2O60269 458 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 KDM4BO94953 1096 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 CTLA4P16410 223 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 SLC25A1P53007 311 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 EPHA4P54764 986 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 Q499Y3 187 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 OR7E24Q6IFN5 339 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 FAM122CQ6P4D5 195 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 BAIAP2L2Q6UXY1 529 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 PRSS35Q8N3Z0 413 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 STPG2Q8N412 459 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 RELL2Q8NC24 303 aaPredicted RBP11.82□□□□□ -0.52
CTNS-201ENST00000046640 OR6M1Q8NGM8 313 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 DMRTA2Q96SC8 542 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 NPTNQ9Y639 398 aa11.82□□□□□ -0.52
CTNS-201ENST00000046640 CTDSPLO15194 276 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 ABHD16AO95870 558 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 IFNGR1P15260 489 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 CCKBRP32239 447 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 NUP62P37198 522 aaPredicted RBP11.81□□□□□ -0.52
CTNS-201ENST00000046640 CAPZA2P47755 286 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 SLC6A8P48029 635 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 DHPSP49366 369 aaPredicted RBP11.81□□□□□ -0.52
CTNS-201ENST00000046640 H2BFSP57053 126 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 RNF4P78317 190 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 FMODQ06828 376 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 HLXQ14774 488 aaPredicted RBP11.81□□□□□ -0.52
CTNS-201ENST00000046640 ISXQ2M1V0 245 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 EEF1A1P5Q5VTE0 462 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 C1orf140Q5VVS0 124 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 GUSBP11Q6P575 273 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 ARSKQ6UWY0 536 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 MAMDC2Q7Z304 686 aaPredicted RBP11.81□□□□□ -0.52
CTNS-201ENST00000046640 OR2I1PQ8NGU4 316 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 LHFPL5Q8TAF8 219 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 TNFAIP8L1Q8WVP5 186 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 TSEN15Q8WW01 171 aaKnown RBP11.81□□□□□ -0.52
CTNS-201ENST00000046640 MVB12AQ96EY5 273 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 SLC41A2Q96JW4 573 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 KLHL15Q96M94 604 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 RAB33BQ9H082 229 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 SLITRK2Q9H156 845 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 TMEM185BQ9H7F4 350 aa11.81□□□□□ -0.52
CTNS-201ENST00000046640 AKIRIN1Q9H9L7 192 aaPredicted RBP11.81□□□□□ -0.52
CTNS-201ENST00000046640 ZMAT3Q9HA38 289 aaKnown RBP11.81□□□□□ -0.52
CTNS-201ENST00000046640 GPN1Q9HCN4 374 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms