RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ZNF665Q9H7R5 613 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 CCNB1IP1Q9NPC3 277 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 GID8Q9NWU2 228 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 CGGBP1Q9UFW8 167 aaPredicted RBP13.51□□□□□ -0.25
ERCC1-201ENST00000013807 SHOX2O60902 331 aaPredicted RBP13.5□□□□□ -0.25
ERCC1-201ENST00000013807 PNPP00491 289 aa13.5□□□□□ -0.25
ERCC1-201ENST00000013807 CST2P09228 141 aa13.5□□□□□ -0.25
ERCC1-201ENST00000013807 FMODQ06828 376 aa13.5□□□□□ -0.25
ERCC1-201ENST00000013807 ALKBH6Q3KRA9 238 aa13.5□□□□□ -0.25
ERCC1-201ENST00000013807 TMEM255AQ5JRV8 349 aa13.5□□□□□ -0.25
ERCC1-201ENST00000013807 C1orf229Q6ZS94 237 aaPredicted RBP13.5□□□□□ -0.25
ERCC1-201ENST00000013807 ALDH16A1Q8IZ83 802 aa13.5□□□□□ -0.25
ERCC1-201ENST00000013807 RNF113BQ8IZP6 322 aaKnown RBP13.5□□□□□ -0.25
ERCC1-201ENST00000013807 RBP7Q96R05 134 aa13.5□□□□□ -0.25
ERCC1-201ENST00000013807 NARFLQ9H6Q4 476 aa13.5□□□□□ -0.25
ERCC1-201ENST00000013807 METTL17Q9H7H0 456 aaPredicted RBP13.5□□□□□ -0.25
ERCC1-201ENST00000013807 CYSLTR2Q9NS75 346 aa13.5□□□□□ -0.25
ERCC1-201ENST00000013807 EIF3KQ9UBQ5 218 aaKnown RBP13.5□□□□□ -0.25
ERCC1-201ENST00000013807 AP3M1Q9Y2T2 418 aa13.5□□□□□ -0.25
ERCC1-201ENST00000013807 TIMM10BQ9Y5J6 103 aa13.5□□□□□ -0.25
ERCC1-201ENST00000013807 ELOVL7A1L3X0 281 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 SLC22A2O15244 555 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 CDC14BO60729 498 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 VENTXO95231 258 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 TROVE2P10155 538 aaKnown RBP eCLIP13.49□□□□□ -0.25
ERCC1-201ENST00000013807 DRD4P21917 467 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 TUBG1P23258 451 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 IFNA8P32881 189 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 ZNF81P51508 661 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 ARFIP2P53365 341 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 PCBD1P61457 104 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 PRKCDQ05655 676 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 HFEQ30201 348 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 USP51Q70EK9 711 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 MICU2Q8IYU8 434 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 OFCC1Q8IZS5 231 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 OR2T12Q8NG77 320 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 KLF14Q8TD94 323 aaPredicted RBP13.49□□□□□ -0.25
ERCC1-201ENST00000013807 RAB39BQ96DA2 213 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 ELMOD3Q96FG2 381 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 OR2H1Q9GZK4 316 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 WNT5BQ9H1J7 359 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 OR51B6Q9H340 312 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 SAP30LQ9HAJ7 183 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 TUBG2Q9NRH3 451 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 MAN2C1Q9NTJ4 1040 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 DECR2Q9NUI1 292 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 ARGLU1Q9NWB6 273 aaPredicted RBP13.49□□□□□ -0.25
ERCC1-201ENST00000013807 WIPI2Q9Y4P8 454 aa13.49□□□□□ -0.25
ERCC1-201ENST00000013807 C5orf49A4QMS7 147 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 A6NIZ1 184 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 CLDN25C9JDP6 229 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 J3QLI3 93 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 AHCYL1O43865 530 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 SASH3O75995 380 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 UBOX5O94941 541 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 AVPP01185 164 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 IGHV1-46P01743 117 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 IGHV2-5P01817 119 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 CD55P08174 381 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 COX5BP10606 129 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 IFI30P13284 250 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 MAKP20794 623 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 FUT4P22083 530 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 GATA3P23771 443 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 LAP3P28838 519 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 GCH1P30793 250 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 SLC9A3P48764 834 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 COMPP49747 757 aaPredicted RBP13.48□□□□□ -0.25
ERCC1-201ENST00000013807 GDI2P50395 445 aaKnown RBP13.48□□□□□ -0.25
ERCC1-201ENST00000013807 CTXN1P60606 82 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 RAP1BP61224 184 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 RAP1AP62834 184 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 CD47Q08722 323 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 SGCAQ16586 387 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 CGB2Q6NT52 195 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 LZICQ8WZA0 190 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 DIRC2Q96SL1 478 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 LPAR2Q9HBW0 351 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 ZDHHC8Q9ULC8 765 aa13.48□□□□□ -0.25
ERCC1-201ENST00000013807 PPIAL4EA0A075B759 164 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 PPIAL4CA0A0B4J2A2 164 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 LOC100653049A0A140TA62 436 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 PPIAL4DF5H284 164 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 FFAR1O14842 300 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 PLPP2O43688 288 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 PIP5K1CO60331 668 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 KRT34O76011 436 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 PRSS23O95084 383 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 MPZL1O95297 269 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 PPIAL4FP0DN26 164 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 CCNOP22674 350 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 MPV17P39210 176 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 HILS1P60008 231 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 ERVK-25P63136 954 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 MVKQ03426 396 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 ENDOGQ14249 297 aaKnown RBP13.47□□□□□ -0.25
ERCC1-201ENST00000013807 TRAM2Q15035 370 aa13.47□□□□□ -0.25
ERCC1-201ENST00000013807 LRRC23Q53EV4 343 aaPredicted RBP13.47□□□□□ -0.25
ERCC1-201ENST00000013807 FAHD2BQ6P2I3 314 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms