RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Slc6a7Q6PGE7 637 aa23.24■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Cpeb3Q7TN99 716 aa23.24■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Rxfp3Q8BGE9 472 aa23.24■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Slc22a29Q8BWG6 551 aa23.24■■□□□ 1.31
Tpm1-216ENSMUST00000113707 FevQ8QZW2 237 aa23.24■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Olfr444Q8VFS6 310 aa23.24■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Nt5dc2Q91X76 390 aaKnown RBP23.24■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Sectm1aQ921W8 192 aa23.24■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Znf346Q9R0B7 294 aa23.24■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Deaf1Q9Z1T5 566 aa23.24■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Gm21854A0A087WNM4 232 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Ggta1l1A2AUQ7 319 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Gpr155A2AWR3 868 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Prdx6O08709 224 aaKnown RBP23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Hoxd4P10628 250 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Zfp157Q6PCM4 567 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Olfr1115Q7TR53 326 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Olfr776Q7TRI3 312 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Slc30a6Q8BJM5 460 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Olfr633Q8VF02 312 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Slc35b3Q922Q5 369 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Gdpd1Q9CRY7 314 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 SigirrQ9JLZ8 409 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Plekhb1Q9QYE9 243 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 CcniQ9Z2V9 377 aa23.23■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Mfsd4b4J3QNS5 503 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Alx3O70137 343 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Plpp5Q3UMZ3 260 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Pgap1Q3UUQ7 922 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Acvr1bQ61271 505 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Sqstm1Q64337 442 aaKnown RBP23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Hsh2dQ6VYH9 334 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Fbxw13Q8BI57 466 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Arhgap22Q8BL80 702 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Chpt1Q8C025 398 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Cacng6Q8VHW3 260 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Q91V76 315 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Gm11361A0A1Y7VKY1 152 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Gm42957D6RFQ2 366 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Gm19345G3UYD9 124 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Rps18P62270 152 aaKnown RBP23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Cass4Q08EC4 804 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Clec7aQ6QLQ4 244 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Vgll4Q80V24 287 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Rab39aQ8BHD0 217 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Olfr1497Q8VG11 314 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Basp1Q91XV3 226 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Arl5bQ9D4P0 179 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Sh3bgrlQ9JJU8 114 aaKnown RBP23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Lpar2Q9JL06 348 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Tbl2Q9R099 442 aaKnown RBP23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Avpr1bQ9WU02 421 aa23.22■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Vmn2r28L7N203 852 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Rasd1O35626 280 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 CaskO70589 926 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 C1qbP14106 253 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 PrkcaP20444 672 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Ccr1l1P51676 356 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Cd59bP58019 129 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Otx2P80206 289 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 C1rlQ3UZ09 482 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Rspo4Q8BJ73 228 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Peli1Q8C669 418 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Flywch1Q8CI03 673 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Vmn1r23Q8R2D0 302 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Dtwd2Q9D0U1 298 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Rnf128Q9D304 428 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Gabra4Q9D6F4 552 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Chrm3Q9ERZ3 589 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Trim39Q9ESN2 488 aa23.21■■□□□ 1.31
Tpm1-216ENSMUST00000113707 Plxnb1Q8CJH3 2119 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Vmn1r152E9Q9N3 307 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Vmn1r104L7N293 307 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Igh-1aP01865 398 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 VtnP29788 478 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Rad52P43352 420 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Doc2bP70169 412 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Malt1Q2TBA3 832 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Lrrn1Q61809 716 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Gpr139Q80UC8 345 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Vmn1r43Q8VIC9 329 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Slc38a3Q9DCP2 505 aa23.2■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Olfr1315-ps1A0A140LI66 314 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 DytnA2CI98 653 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Scgb2b3D2XZ38 112 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Trim15G3UY57 292 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Atxn2O70305 1285 aaKnown RBP23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Arl6O88848 186 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Elfn1Q8C8T7 828 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Swi5Q8K3D3 89 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Ccm2lQ8VCC6 481 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Ccdc92Q8VDN4 314 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Olfr536Q8VFE9 307 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Olfr1316Q8VG12 314 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 NwcQ9CQI4 244 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Lyzl6Q9DA11 148 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Cln8Q9QUK3 288 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Pdcd1lg2Q9WUL5 247 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 4930522L14RikE9QAG4 666 aa23.19■■□□□ 1.3
Tpm1-216ENSMUST00000113707 Vmn2r36K7N741 852 aa23.19■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms