RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Nop16Q9CPT5 178 aaKnown RBP19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Zmynd19Q9CQG3 227 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Olfr937Q9EQB4 311 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Phf1Q9Z1B8 559 aa19.02■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Celsr1O35161 3034 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Igkv4-63A0A0G2JFU6 117 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Ppp1r3dA2AJW4 279 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm45062E0CZ38 131 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Vmn2r28L7N203 852 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Znf271P15620 580 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gdf1P20863 357 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Tbx5P70326 518 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Nfatc3P97305 1075 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Slc25a33Q3TZX3 320 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Fbxw20Q5U467 468 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Olfr145Q60882 310 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Usf1Q61069 310 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Acvr1bQ61271 505 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Meig1Q61845 88 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Abhd17bQ7M759 288 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Zdhhc25Q810M4 279 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Prdx6bQ8BG37 224 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 A730061H03RikQ8BGD2 154 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Fam221aQ8C790 301 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Vmn1r42Q8VBS7 329 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Olfr502Q8VG09 314 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Steap1Q9CWR7 339 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Slc6a19Q9D687 634 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Fbxo6Q9QZN4 295 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Syt8Q9R0N6 395 aa19.01■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Pramef6A2A8M8 474 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Rpl3lE9PWZ3 407 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 GzmmO08643 264 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 MfngO09008 321 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 P01746 140 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Guca2aP33680 116 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Fkbp2P45878 140 aaKnown RBP19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 StsP50427 624 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Sox3P53784 375 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Lsm3P62311 102 aaKnown RBP19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Shc1P98083 579 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Cnn2Q08093 305 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Cdk10Q3UMM4 360 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Arhgef9Q3UTH8 516 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 C1rlQ3UZ09 482 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Tab3Q571K4 716 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Pck2Q8BH04 640 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Psmf1Q8BHL8 271 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Xkr8Q8C0T0 401 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Hus1bQ8K572 276 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Angptl8Q8R1L8 198 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Sav1Q8VEB2 386 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 MrgprdQ91ZB8 321 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Sgk3Q9ERE3 496 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Urb1Q571H0 2274 aaKnown RBP19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Trbv2A0A0B4J1G8 114 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Igkv9-124A0A0G2JDR3 117 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Fnd3c2A2AP83 941 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Dpy19l1A6X919 746 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm436B1AVU6 407 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Hoxb6P09023 224 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Klrb1cP27814 223 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Actc1P68033 377 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Acta1P68134 377 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Cab39Q06138 341 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Tle3Q08122 772 aaKnown RBP19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Rrm2bQ6PEE3 351 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Olfr776Q7TRI3 312 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 IfnkQ7TSL0 199 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 BspryQ80YW5 473 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 SynbQ8BI41 618 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Olfr1484Q8VEU6 315 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Olfr771Q8VFH6 317 aa19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Spcs2Q9CYN2 226 aaKnown RBP19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Sh3bgrlQ9JJU8 114 aaKnown RBP19■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm10406A6NAS4 205 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm3667K7N757 205 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Alx3O70137 343 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 P01795 144 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 RidaP52760 135 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 CdaP56389 146 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Vbp1P61759 196 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 HbegfQ06186 208 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 4930480E11RikQ0VG34 394 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 C130050O18RikQ497Y9 356 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm3558Q5FWC9 205 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Smim37Q8BT35 56 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Ntng2Q8R4F1 589 aaKnown RBP18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Olfr803Q8VFI3 308 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Fmo4Q8VHG0 560 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Krt88Q9CPR6 171 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Efcab11Q9D0E5 162 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Tysnd1Q9DBA6 568 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Sorcs2Q9EPR5 1159 aa18.99■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Phf3B2RQG2 2025 aaKnown RBP18.98■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Gm4787B2RUD9 748 aa18.98■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 Efna3O08545 230 aa18.98■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 P01661 131 aa18.98■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 P01662 111 aa18.98■□□□□ 0.63
Ccdc88a-202ENSMUST00000109477 P01663 111 aa18.98■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms