RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Il9P15247 144 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 DcnP28654 354 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Capza1P47753 286 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Tcfl5Q32NY8 489 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Cep44Q5HZK1 386 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Plpp1Q61469 283 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Zfp157Q6PCM4 567 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Mblac1Q8BWY4 260 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Neurl3Q8CJC5 254 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 DnlzQ9D113 177 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Q9D4W2 315 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gstk1Q9DCM2 226 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Thsd1Q9JM61 851 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Stub1Q9WUD1 304 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Rasal1Q9Z268 799 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Oasl2Q9Z2F2 508 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Abca7Q91V24 2159 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Pcnx3Q8VI59 2028 aa20.39■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gm42421F6X8D5 166 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Alx3O70137 343 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 PitpnaP53810 271 aaKnown RBP20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Rps5P97461 204 aaKnown RBP20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Fam187bQ0VAY3 358 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm136Q3V037 328 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm525Q3V3I5 90 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Elavl2Q60899 360 aaKnown RBP20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Npepl1Q6NSR8 524 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Trim45Q6PFY8 580 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ddhd2Q80Y98 699 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 McubQ810S1 345 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Kazald1Q8BJ66 313 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Cpne5Q8JZW4 593 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Snrnp27Q8K194 155 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tmcc3Q8R310 477 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Efcab7Q8VDY4 628 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr558Q8VGZ7 317 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Nt5dc2Q91X76 390 aaKnown RBP20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Lrch4Q921G6 680 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Itgb3bpQ9CQ82 176 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Glipr2Q9CYL5 154 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 LhppQ9D7I5 270 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Osbpl3Q9DBS9 855 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Slc38a3Q9DCP2 505 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Lpar3Q9EQ31 354 aa20.39■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ncor2Q9WU42 2472 aaKnown RBP20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr287E9PZS7 322 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 2610001J05RikF2Z3Y9 59 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Vmn1r12G5E8G1 307 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Opn1swP51491 346 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Smad5P97454 465 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 VegfdP97946 358 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Mrgprb2Q3KNA1 338 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Alg11Q3TZM9 492 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 ScocQ78YZ6 125 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 CblcQ80XL1 496 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Fbxw14Q8C2Y5 466 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm10283Q8C3L5 117 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Micu2Q8CD10 432 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Slc9a8Q8R4D1 576 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Mrgpra3Q91WW3 302 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Q99LU8 229 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ddx28Q9CWT6 540 aaKnown RBP20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ap3s1Q9DCR2 193 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Klhl1Q9JI74 751 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gm21865A0A087WRL2 222 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr1040A2ARY1 313 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tmem229aB9EJI9 371 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Vmn2r16E9Q025 850 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Prdx6O08709 224 aaKnown RBP20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Igh-1aP01865 398 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 GrnP28798 589 aaKnown RBP20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Fkbp2P45878 140 aaKnown RBP20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Clec10aP49300 304 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ccr2P51683 373 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Abcd3P55096 659 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Hrh3P58406 445 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gpr85P60894 370 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Fbxo31Q3TQF0 507 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Zfp9Q8BIS1 454 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Vmn1r212Q8R268 357 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Klhl25Q8R2P1 589 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr828Q8VFM8 312 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr488Q8VG02 314 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Olfr378Q8VGT2 314 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Ces2cQ91WG0 561 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Slc25a46Q9CQS4 418 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Shisa5Q9D7I0 235 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tmem41aQ9D8U2 264 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Arl6ip1Q9JKW0 203 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Abt1Q9QYL7 269 aaKnown RBP20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Syt8Q9R0N6 395 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Tyk2Q9R117 1184 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Wif1Q9WUA1 379 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Orc5Q9WUV0 435 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Skp2Q9Z0Z3 424 aa20.38■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Arfgef3Q3UGY8 2170 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Gpr155A2AWR3 868 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Btbd8D3YUB6 377 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 8030474K03RikE9Q4Y8 554 aa20.37■□□□□ 0.85
Scn1b-201ENSMUST00000098548 Vmn2r89O35199 507 aa20.37■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms