RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 AHDC1Q5TGY3 1603 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-229ENST00000641891 CYP21A2P08686 494 aa20.24■□□□□ 0.83
PHGDH-229ENST00000641891 NLRP10Q86W26 655 aa20.24■□□□□ 0.83
PHGDH-229ENST00000641891 RBSNQ9H1K0 784 aa20.24■□□□□ 0.83
PHGDH-229ENST00000641891 MTMR6Q9Y217 621 aa20.24■□□□□ 0.83
PHGDH-229ENST00000641891 U3KPZ7 1027 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-229ENST00000641891 PLA2G12BQ9BX93 195 aa20.24■□□□□ 0.83
PHGDH-229ENST00000641891 DOT1LQ8TEK3 1739 aa20.23■□□□□ 0.83
PHGDH-229ENST00000641891 CSF1RP07333 972 aa20.23■□□□□ 0.83
PHGDH-229ENST00000641891 STK3Q13188 491 aa20.23■□□□□ 0.83
PHGDH-229ENST00000641891 TAF7LQ5H9L4 462 aa20.23■□□□□ 0.83
PHGDH-229ENST00000641891 TPRNQ4KMQ1 711 aa20.22■□□□□ 0.83
PHGDH-229ENST00000641891 ADAMTS2O95450 1211 aa20.22■□□□□ 0.83
PHGDH-229ENST00000641891 IFIT5Q13325 482 aaKnown RBP20.22■□□□□ 0.83
PHGDH-229ENST00000641891 ANKRD1Q15327 319 aa20.22■□□□□ 0.83
PHGDH-229ENST00000641891 ZMYM1Q5SVZ6 1142 aa20.22■□□□□ 0.83
PHGDH-229ENST00000641891 XAGE2Q96GT9 111 aa20.22■□□□□ 0.83
PHGDH-229ENST00000641891 NEK1Q96PY6 1258 aa20.22■□□□□ 0.83
PHGDH-229ENST00000641891 ALDH8A1Q9H2A2 487 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-229ENST00000641891 A0A0G2JLW4 131 aa20.21■□□□□ 0.83
PHGDH-229ENST00000641891 VPS37CA5D8V6 355 aaPredicted RBP20.21■□□□□ 0.83
PHGDH-229ENST00000641891 FKBP4Q02790 459 aaKnown RBP eCLIP20.21■□□□□ 0.83
PHGDH-229ENST00000641891 KRT32Q14532 448 aa20.21■□□□□ 0.83
PHGDH-229ENST00000641891 STOX1Q6ZVD7 989 aa20.21■□□□□ 0.83
PHGDH-229ENST00000641891 GREM2Q9H772 168 aa20.21■□□□□ 0.83
PHGDH-229ENST00000641891 HELLSQ9NRZ9 838 aa20.21■□□□□ 0.83
PHGDH-229ENST00000641891 RIC1Q4ADV7 1423 aa20.21■□□□□ 0.83
PHGDH-229ENST00000641891 ANKRD36CQ5JPF3 1778 aa20.21■□□□□ 0.83
PHGDH-229ENST00000641891 A0A0G2JS52 829 aa20.21■□□□□ 0.83
PHGDH-229ENST00000641891 TMEM87AQ8NBN3 555 aa20.21■□□□□ 0.83
PHGDH-229ENST00000641891 TBC1D2BQ9UPU7 963 aa20.21■□□□□ 0.83
PHGDH-229ENST00000641891 MAST3O60307 1309 aa20.21■□□□□ 0.83
PHGDH-229ENST00000641891 SCARF1Q14162 830 aa20.2■□□□□ 0.82
PHGDH-229ENST00000641891 TTC39AQ5SRH9 613 aa20.2■□□□□ 0.82
PHGDH-229ENST00000641891 LRSAM1Q6UWE0 723 aa20.2■□□□□ 0.82
PHGDH-229ENST00000641891 CDHR2Q9BYE9 1310 aa20.2■□□□□ 0.82
PHGDH-229ENST00000641891 M0R2C6 588 aa20.19■□□□□ 0.82
PHGDH-229ENST00000641891 RNF113AO15541 343 aaKnown RBP20.19■□□□□ 0.82
PHGDH-229ENST00000641891 FIBPO43427 364 aa20.19■□□□□ 0.82
PHGDH-229ENST00000641891 GORABQ5T7V8 394 aa20.19■□□□□ 0.82
PHGDH-229ENST00000641891 TTLL11Q8NHH1 800 aa20.19■□□□□ 0.82
PHGDH-229ENST00000641891 LRRC2Q9BYS8 371 aa20.19■□□□□ 0.82
PHGDH-229ENST00000641891 ITGA6P23229 1130 aa20.19■□□□□ 0.82
PHGDH-229ENST00000641891 DNM1Q05193 864 aaKnown RBP20.19■□□□□ 0.82
PHGDH-229ENST00000641891 Q6ZUG5 572 aa20.19■□□□□ 0.82
PHGDH-229ENST00000641891 AKAP2Q9Y2D5 859 aa20.19■□□□□ 0.82
PHGDH-229ENST00000641891 CTSWP56202 376 aa20.18■□□□□ 0.82
PHGDH-229ENST00000641891 CCDC158Q5M9N0 1113 aa20.18■□□□□ 0.82
PHGDH-229ENST00000641891 FBXO3Q9UK99 471 aa20.18■□□□□ 0.82
PHGDH-229ENST00000641891 NUP98P52948 1817 aa20.18■□□□□ 0.82
PHGDH-229ENST00000641891 SPEF2Q9C093 1822 aa20.18■□□□□ 0.82
PHGDH-229ENST00000641891 LAMA4Q16363 1823 aa20.18■□□□□ 0.82
PHGDH-229ENST00000641891 UBN2Q6ZU65 1347 aa20.18■□□□□ 0.82
PHGDH-229ENST00000641891 IRS4O14654 1257 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-229ENST00000641891 LARP1BQ659C4 914 aaKnown RBP20.18■□□□□ 0.82
PHGDH-229ENST00000641891 PI16Q6UXB8 463 aa20.18■□□□□ 0.82
PHGDH-229ENST00000641891 CDC37L1Q7L3B6 337 aa20.18■□□□□ 0.82
PHGDH-229ENST00000641891 DZIP3Q86Y13 1208 aaKnown RBP20.18■□□□□ 0.82
PHGDH-229ENST00000641891 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.18■□□□□ 0.82
PHGDH-229ENST00000641891 ACSBG1Q96GR2 724 aa20.18■□□□□ 0.82
PHGDH-229ENST00000641891 TRMT112Q9UI30 125 aaKnown RBP20.18■□□□□ 0.82
PHGDH-229ENST00000641891 HSPD1P10809 573 aaKnown RBP20.17■□□□□ 0.82
PHGDH-229ENST00000641891 HSP90AB3PQ58FF7 597 aa20.17■□□□□ 0.82
PHGDH-229ENST00000641891 METTL24Q5JXM2 366 aa20.17■□□□□ 0.82
PHGDH-229ENST00000641891 DSCC1Q9BVC3 393 aa20.17■□□□□ 0.82
PHGDH-229ENST00000641891 RIPOR2Q9Y4F9 1068 aa20.17■□□□□ 0.82
PHGDH-229ENST00000641891 OSBP2Q969R2 916 aa20.17■□□□□ 0.82
PHGDH-229ENST00000641891 ATP6V1DQ9Y5K8 247 aa20.17■□□□□ 0.82
PHGDH-229ENST00000641891 SLIT2O94813 1529 aa20.16■□□□□ 0.82
PHGDH-229ENST00000641891 NRAPQ86VF7 1730 aa20.16■□□□□ 0.82
PHGDH-229ENST00000641891 ZAP70P43403 619 aa20.16■□□□□ 0.82
PHGDH-229ENST00000641891 LDHAL6AQ6ZMR3 332 aa20.16■□□□□ 0.82
PHGDH-229ENST00000641891 SPATA31A1Q5TZJ5 1347 aa20.15■□□□□ 0.82
PHGDH-229ENST00000641891 CCDC173Q0VFZ6 552 aa20.15■□□□□ 0.82
PHGDH-229ENST00000641891 ATP2B3Q16720 1220 aa20.15■□□□□ 0.82
PHGDH-229ENST00000641891 FERMT3Q86UX7 667 aa20.15■□□□□ 0.82
PHGDH-229ENST00000641891 MYH3P11055 1940 aa20.15■□□□□ 0.82
PHGDH-229ENST00000641891 JAK2O60674 1132 aa20.15■□□□□ 0.82
PHGDH-229ENST00000641891 HSP90B1P14625 803 aaKnown RBP20.15■□□□□ 0.82
PHGDH-229ENST00000641891 IL6STP40189 918 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-229ENST00000641891 BRF1Q92994 677 aa20.15■□□□□ 0.82
PHGDH-229ENST00000641891 GTF3C6Q969F1 213 aa20.15■□□□□ 0.82
PHGDH-229ENST00000641891 ANKRD18BA2A2Z9 1011 aa20.14■□□□□ 0.81
PHGDH-229ENST00000641891 DDB1Q16531 1140 aa20.14■□□□□ 0.81
PHGDH-229ENST00000641891 TTLL5Q6EMB2 1281 aa20.14■□□□□ 0.81
PHGDH-229ENST00000641891 SYAP1Q96A49 352 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-229ENST00000641891 PPP1R9BQ96SB3 815 aa20.14■□□□□ 0.81
PHGDH-229ENST00000641891 FAM173BQ6P4H8 233 aa20.14■□□□□ 0.81
PHGDH-229ENST00000641891 CNNM1Q9NRU3 951 aa20.14■□□□□ 0.81
PHGDH-229ENST00000641891 NUTM2BA6NNL0 878 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-229ENST00000641891 NUTM2EB1AL46 878 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-229ENST00000641891 ERVV-1B6SEH8 477 aa20.13■□□□□ 0.81
PHGDH-229ENST00000641891 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
PHGDH-229ENST00000641891 UBE2HP62256 183 aa20.13■□□□□ 0.81
PHGDH-229ENST00000641891 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-229ENST00000641891 TRIM44Q96DX7 344 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-229ENST00000641891 E7EWF7 191 aa20.12■□□□□ 0.81
PHGDH-229ENST00000641891 WASHC4Q2M389 1173 aa20.12■□□□□ 0.81
PHGDH-229ENST00000641891 INTS5Q6P9B9 1019 aaKnown RBP20.12■□□□□ 0.81
PHGDH-229ENST00000641891 ZNF34Q8IZ26 560 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms