RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 MS4A1P11836 297 aa11.88□□□□□ -0.51
PHGDH-228ENST00000641847 GMPSP49915 693 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-228ENST00000641847 CRY2Q49AN0 593 aa11.88□□□□□ -0.51
PHGDH-228ENST00000641847 RGMBQ6NW40 437 aa11.88□□□□□ -0.51
PHGDH-228ENST00000641847 COPS6Q7L5N1 327 aa11.88□□□□□ -0.51
PHGDH-228ENST00000641847 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-228ENST00000641847 DZIP1LQ8IYY4 767 aaKnown RBP11.88□□□□□ -0.51
PHGDH-228ENST00000641847 PANK1Q8TE04 598 aa11.88□□□□□ -0.51
PHGDH-228ENST00000641847 CLUAP1Q96AJ1 413 aa11.88□□□□□ -0.51
PHGDH-228ENST00000641847 F6X3S4 739 aa11.87□□□□□ -0.51
PHGDH-228ENST00000641847 RLBP1P12271 317 aa11.87□□□□□ -0.51
PHGDH-228ENST00000641847 HOXA10P31260 410 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-228ENST00000641847 ZNF157P51786 506 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-228ENST00000641847 PDE3AQ14432 1141 aa11.87□□□□□ -0.51
PHGDH-228ENST00000641847 KIF6Q6ZMV9 814 aa11.87□□□□□ -0.51
PHGDH-228ENST00000641847 TTLL7Q6ZT98 887 aa11.87□□□□□ -0.51
PHGDH-228ENST00000641847 MKI67P46013 3256 aaKnown RBP11.86□□□□□ -0.51
PHGDH-228ENST00000641847 PI4KAP2A4QPH2 592 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 KIF23Q02241 960 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-228ENST00000641847 CXCL9Q07325 125 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 AOC3Q16853 763 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 SLC4A10Q6U841 1118 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 KSR2Q6VAB6 950 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 TMEM57Q8N5G2 664 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 PI4KAP1Q8N8J0 262 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 DNAAF4Q8WXU2 420 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 CRAMP1Q96RY5 1269 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 CRBNQ96SW2 442 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 RNF186Q9NXI6 227 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 MAP3K2Q9Y2U5 619 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 ANKRD36CQ5JPF3 1778 aa11.86□□□□□ -0.51
PHGDH-228ENST00000641847 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
PHGDH-228ENST00000641847 USP48Q86UV5 1035 aa11.85□□□□□ -0.51
PHGDH-228ENST00000641847 ITPRIPQ8IWB1 547 aa11.85□□□□□ -0.51
PHGDH-228ENST00000641847 PLBD2Q8NHP8 589 aa11.85□□□□□ -0.51
PHGDH-228ENST00000641847 ZIC5Q96T25 663 aa11.85□□□□□ -0.51
PHGDH-228ENST00000641847 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
PHGDH-228ENST00000641847 GBA2Q9HCG7 927 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-228ENST00000641847 HDAC9Q9UKV0 1011 aa11.85□□□□□ -0.51
PHGDH-228ENST00000641847 HPS5Q9UPZ3 1129 aa11.85□□□□□ -0.51
PHGDH-228ENST00000641847 COG6Q9Y2V7 657 aa11.85□□□□□ -0.51
PHGDH-228ENST00000641847 MVPQ14764 893 aaKnown RBP11.84□□□□□ -0.51
PHGDH-228ENST00000641847 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
PHGDH-228ENST00000641847 KRT26Q7Z3Y9 468 aa11.84□□□□□ -0.51
PHGDH-228ENST00000641847 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
PHGDH-228ENST00000641847 CNOT7Q9UIV1 285 aaKnown RBP11.84□□□□□ -0.51
PHGDH-228ENST00000641847 A0A0C4DFX4 3053 aa11.84□□□□□ -0.51
PHGDH-228ENST00000641847 SNED1Q8TER0 1413 aa11.84□□□□□ -0.51
PHGDH-228ENST00000641847 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
PHGDH-228ENST00000641847 FAM155AB1AL88 458 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-228ENST00000641847 CCT4P50991 539 aaKnown RBP11.83□□□□□ -0.52
PHGDH-228ENST00000641847 INTS3Q68E01 1043 aaKnown RBP11.83□□□□□ -0.52
PHGDH-228ENST00000641847 DPP8Q6V1X1 898 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-228ENST00000641847 DCPSQ96C86 337 aaKnown RBP11.83□□□□□ -0.52
PHGDH-228ENST00000641847 MYD88Q99836 296 aa11.83□□□□□ -0.52
PHGDH-228ENST00000641847 ATP6V0A2Q9Y487 856 aa11.83□□□□□ -0.52
PHGDH-228ENST00000641847 NUP98P52948 1817 aa11.83□□□□□ -0.52
PHGDH-228ENST00000641847 ERVV-1B6SEH8 477 aa11.82□□□□□ -0.52
PHGDH-228ENST00000641847 RAD17O75943 681 aa11.82□□□□□ -0.52
PHGDH-228ENST00000641847 HLFQ16534 295 aa11.82□□□□□ -0.52
PHGDH-228ENST00000641847 HABP4Q5JVS0 413 aaKnown RBP11.82□□□□□ -0.52
PHGDH-228ENST00000641847 EXOC6Q8TAG9 804 aa11.82□□□□□ -0.52
PHGDH-228ENST00000641847 NLRP3Q96P20 1036 aa11.82□□□□□ -0.52
PHGDH-228ENST00000641847 METTL22Q9BUU2 404 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-228ENST00000641847 SRCIN1Q9C0H9 1055 aa11.82□□□□□ -0.52
PHGDH-228ENST00000641847 COL4A5P29400 1685 aa11.81□□□□□ -0.52
PHGDH-228ENST00000641847 HIRAP54198 1017 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-228ENST00000641847 NEXNQ0ZGT2 675 aa11.81□□□□□ -0.52
PHGDH-228ENST00000641847 BEND3Q5T5X7 828 aa11.81□□□□□ -0.52
PHGDH-228ENST00000641847 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
PHGDH-228ENST00000641847 LINS1Q8NG48 757 aa11.81□□□□□ -0.52
PHGDH-228ENST00000641847 TRPM4Q8TD43 1214 aa11.81□□□□□ -0.52
PHGDH-228ENST00000641847 CSRNP1Q96S65 589 aa11.81□□□□□ -0.52
PHGDH-228ENST00000641847 RTFDC1Q9BY42 306 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-228ENST00000641847 DDX19BQ9UMR2 479 aa11.81□□□□□ -0.52
PHGDH-228ENST00000641847 ABCC12Q96J65 1359 aa11.8□□□□□ -0.52
PHGDH-228ENST00000641847 BBOX1O75936 387 aa11.8□□□□□ -0.52
PHGDH-228ENST00000641847 KIAA2012Q0VF49 1180 aa11.8□□□□□ -0.52
PHGDH-228ENST00000641847 HSP90AB3PQ58FF7 597 aa11.8□□□□□ -0.52
PHGDH-228ENST00000641847 PPP1R42Q7Z4L9 355 aa11.8□□□□□ -0.52
PHGDH-228ENST00000641847 SULF1Q8IWU6 871 aa11.8□□□□□ -0.52
PHGDH-228ENST00000641847 MPNDQ8N594 471 aa11.8□□□□□ -0.52
PHGDH-228ENST00000641847 DPF2Q92785 391 aa11.8□□□□□ -0.52
PHGDH-228ENST00000641847 IBTKQ9P2D0 1353 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-228ENST00000641847 NEURL1BA8MQ27 555 aa11.79□□□□□ -0.52
PHGDH-228ENST00000641847 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
PHGDH-228ENST00000641847 ALDH1L1O75891 902 aa11.79□□□□□ -0.52
PHGDH-228ENST00000641847 IGKV5-2P06315 115 aa11.79□□□□□ -0.52
PHGDH-228ENST00000641847 SLC10A3P09131 477 aa11.79□□□□□ -0.52
PHGDH-228ENST00000641847 CWF19L2Q2TBE0 894 aaKnown RBP11.79□□□□□ -0.52
PHGDH-228ENST00000641847 GIGYF2Q6Y7W6 1299 aaKnown RBP11.79□□□□□ -0.52
PHGDH-228ENST00000641847 RIC1Q4ADV7 1423 aa11.78□□□□□ -0.52
PHGDH-228ENST00000641847 GPTP24298 496 aa11.78□□□□□ -0.52
PHGDH-228ENST00000641847 TCIRG1Q13488 830 aa11.78□□□□□ -0.52
PHGDH-228ENST00000641847 FBXO46Q6PJ61 603 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-228ENST00000641847 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
PHGDH-228ENST00000641847 MEIS3Q99687 375 aa11.78□□□□□ -0.52
PHGDH-228ENST00000641847 ISCA1Q9BUE6 129 aa11.78□□□□□ -0.52
PHGDH-228ENST00000641847 CENPFP49454 3210 aa11.78□□□□□ -0.52
PHGDH-228ENST00000641847 ZBTB7BO15156 539 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms