RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SNX21Q969T3 373 aa10.74□□□□□ -0.69
PHGDH-219ENST00000641513 EVI5LQ96CN4 794 aa10.74□□□□□ -0.69
PHGDH-219ENST00000641513 DNAJC2Q99543 621 aaKnown RBP10.74□□□□□ -0.69
PHGDH-219ENST00000641513 FSD1Q9BTV5 496 aa10.74□□□□□ -0.69
PHGDH-219ENST00000641513 GPR108Q9NPR9 543 aa10.74□□□□□ -0.69
PHGDH-219ENST00000641513 DIAPH3Q9NSV4 1193 aa10.74□□□□□ -0.69
PHGDH-219ENST00000641513 TFCP2L1Q9NZI6 479 aa10.74□□□□□ -0.69
PHGDH-219ENST00000641513 RIC1Q4ADV7 1423 aa10.74□□□□□ -0.69
PHGDH-219ENST00000641513 LRP5O75197 1615 aa10.73□□□□□ -0.69
PHGDH-219ENST00000641513 TNRC6CQ9HCJ0 1690 aaKnown RBP10.73□□□□□ -0.69
PHGDH-219ENST00000641513 PLSCR1O15162 318 aa10.73□□□□□ -0.69
PHGDH-219ENST00000641513 ATP5JP18859 108 aa10.73□□□□□ -0.69
PHGDH-219ENST00000641513 SSFA2P28290 1259 aa10.73□□□□□ -0.69
PHGDH-219ENST00000641513 ATP2B3Q16720 1220 aa10.73□□□□□ -0.69
PHGDH-219ENST00000641513 TTC39AQ5SRH9 613 aa10.73□□□□□ -0.69
PHGDH-219ENST00000641513 CCDC24Q8N4L8 307 aa10.73□□□□□ -0.69
PHGDH-219ENST00000641513 ESYT1Q9BSJ8 1104 aa10.73□□□□□ -0.69
PHGDH-219ENST00000641513 SEC31BQ9NQW1 1179 aa10.73□□□□□ -0.69
PHGDH-219ENST00000641513 CARMIL3Q8ND23 1372 aa10.73□□□□□ -0.69
PHGDH-219ENST00000641513 CACNA1SQ13698 1873 aa10.72□□□□□ -0.69
PHGDH-219ENST00000641513 AKAP11Q9UKA4 1901 aa10.72□□□□□ -0.69
PHGDH-219ENST00000641513 CCDC158Q5M9N0 1113 aa10.72□□□□□ -0.69
PHGDH-219ENST00000641513 CWC27Q6UX04 472 aaKnown RBP10.72□□□□□ -0.69
PHGDH-219ENST00000641513 PROM2Q8N271 834 aa10.72□□□□□ -0.69
PHGDH-219ENST00000641513 HELBQ8NG08 1087 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-219ENST00000641513 RUFY2Q8WXA3 655 aa10.72□□□□□ -0.69
PHGDH-219ENST00000641513 NLRP3Q96P20 1036 aa10.72□□□□□ -0.69
PHGDH-219ENST00000641513 CDC5LQ99459 802 aaKnown RBP10.72□□□□□ -0.69
PHGDH-219ENST00000641513 RNF39Q9H2S5 420 aa10.72□□□□□ -0.69
PHGDH-219ENST00000641513 ANO2Q9NQ90 1003 aa10.72□□□□□ -0.69
PHGDH-219ENST00000641513 RIPOR2Q9Y4F9 1068 aa10.72□□□□□ -0.69
PHGDH-219ENST00000641513 MROH5Q6ZUA9 1318 aa10.72□□□□□ -0.69
PHGDH-219ENST00000641513 ABCC12Q96J65 1359 aa10.72□□□□□ -0.69
PHGDH-219ENST00000641513 HIP1O00291 1037 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 IFIT1P09914 478 aaKnown RBP10.71□□□□□ -0.69
PHGDH-219ENST00000641513 MCCP23508 829 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 ADORA1P30542 326 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 SLC4A3P48751 1232 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 GSE1Q14687 1217 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 NFIXQ14938 502 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 KIAA1211Q6ZU35 1233 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 C3orf67Q6ZVT6 689 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 ANKRD18AQ8IVF6 992 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 CNBD1Q8NA66 436 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 RTL9Q8NET4 1388 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 IL27Q8NEV9 243 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 XAGE2Q96GT9 111 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 USP26Q9BXU7 913 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 TBC1D2Q9BYX2 928 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 NDUFB9Q9Y6M9 179 aa10.71□□□□□ -0.69
PHGDH-219ENST00000641513 EP400Q96L91 3159 aa10.7□□□□□ -0.7
PHGDH-219ENST00000641513 SLC5A1P13866 664 aa10.7□□□□□ -0.7
PHGDH-219ENST00000641513 ST5P78524 1137 aa10.7□□□□□ -0.7
PHGDH-219ENST00000641513 SF3B3Q15393 1217 aaKnown RBP10.7□□□□□ -0.7
PHGDH-219ENST00000641513 SLC10A5Q5PT55 438 aa10.7□□□□□ -0.7
PHGDH-219ENST00000641513 EDC3Q96F86 508 aaKnown RBP10.7□□□□□ -0.7
PHGDH-219ENST00000641513 HAUS7Q99871 368 aa10.7□□□□□ -0.7
PHGDH-219ENST00000641513 CIZ1Q9ULV3 898 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-219ENST00000641513 COL4A1P02462 1669 aa10.69□□□□□ -0.7
PHGDH-219ENST00000641513 GOLIM4O00461 696 aa10.69□□□□□ -0.7
PHGDH-219ENST00000641513 TAF5LO75529 589 aa10.69□□□□□ -0.7
PHGDH-219ENST00000641513 PDE8BO95263 885 aa10.69□□□□□ -0.7
PHGDH-219ENST00000641513 GYS1P13807 737 aa10.69□□□□□ -0.7
PHGDH-219ENST00000641513 SF3B2Q13435 895 aaKnown RBP10.69□□□□□ -0.7
PHGDH-219ENST00000641513 PUM3Q15397 648 aaKnown RBP10.69□□□□□ -0.7
PHGDH-219ENST00000641513 ZNF827Q17R98 1081 aa10.69□□□□□ -0.7
PHGDH-219ENST00000641513 DDX46Q7L014 1031 aaKnown RBP10.69□□□□□ -0.7
PHGDH-219ENST00000641513 PAG1Q9NWQ8 432 aa10.69□□□□□ -0.7
PHGDH-219ENST00000641513 QSER1Q2KHR3 1735 aa10.69□□□□□ -0.7
PHGDH-219ENST00000641513 ANKRD31Q8N7Z5 1873 aa10.68□□□□□ -0.7
PHGDH-219ENST00000641513 SERPINB2P05120 415 aa10.68□□□□□ -0.7
PHGDH-219ENST00000641513 FKBP4Q02790 459 aaKnown RBP eCLIP10.68□□□□□ -0.7
PHGDH-219ENST00000641513 NMIQ13287 307 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-219ENST00000641513 HSCBQ8IWL3 235 aa10.68□□□□□ -0.7
PHGDH-219ENST00000641513 LPIN2Q92539 896 aa10.68□□□□□ -0.7
PHGDH-219ENST00000641513 SNRKQ9NRH2 765 aa10.68□□□□□ -0.7
PHGDH-219ENST00000641513 CHMP5Q9NZZ3 219 aa10.68□□□□□ -0.7
PHGDH-219ENST00000641513 SGSM2O43147 1006 aa10.67□□□□□ -0.7
PHGDH-219ENST00000641513 EN1Q05925 392 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-219ENST00000641513 CHRNDQ07001 517 aa10.67□□□□□ -0.7
PHGDH-219ENST00000641513 EZH2Q15910 746 aaKnown RBP10.67□□□□□ -0.7
PHGDH-219ENST00000641513 COL23A1Q86Y22 540 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-219ENST00000641513 VGLL2Q8N8G2 317 aa10.67□□□□□ -0.7
PHGDH-219ENST00000641513 FLAD1Q8NFF5 587 aa10.67□□□□□ -0.7
PHGDH-219ENST00000641513 RPGRQ92834 1020 aaKnown RBP10.67□□□□□ -0.7
PHGDH-219ENST00000641513 CELF1Q92879 486 aaKnown RBP10.67□□□□□ -0.7
PHGDH-219ENST00000641513 AKT1S1Q96B36 256 aa10.67□□□□□ -0.7
PHGDH-219ENST00000641513 FAM227BQ96M60 508 aa10.67□□□□□ -0.7
PHGDH-219ENST00000641513 CCDC88AQ3V6T2 1871 aa10.67□□□□□ -0.7
PHGDH-219ENST00000641513 DOCK2Q92608 1830 aa10.67□□□□□ -0.7
PHGDH-219ENST00000641513 UQCRFS1P1P0C7P4 283 aa10.66□□□□□ -0.7
PHGDH-219ENST00000641513 PTMSP20962 102 aa10.66□□□□□ -0.7
PHGDH-219ENST00000641513 TM4SF1P30408 202 aa10.66□□□□□ -0.7
PHGDH-219ENST00000641513 DDIT3P35638 169 aa10.66□□□□□ -0.7
PHGDH-219ENST00000641513 KCNJ4P48050 445 aa10.66□□□□□ -0.7
PHGDH-219ENST00000641513 RPS8P62241 208 aaKnown RBP10.66□□□□□ -0.7
PHGDH-219ENST00000641513 PRR5LQ6MZQ0 368 aa10.66□□□□□ -0.7
PHGDH-219ENST00000641513 KBTBD3Q8NAB2 608 aa10.66□□□□□ -0.7
PHGDH-219ENST00000641513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.66□□□□□ -0.7
PHGDH-219ENST00000641513 IL25Q9H293 177 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms