RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
MACF1-235ENST00000641104 PCDHB15Q9Y5E8 787 aa13.7□□□□□ -0.22
MACF1-235ENST00000641104 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.7□□□□□ -0.22
MACF1-235ENST00000641104 GNAT2P19087 354 aa13.69□□□□□ -0.22
MACF1-235ENST00000641104 Q6ZUG5 572 aa13.69□□□□□ -0.22
MACF1-235ENST00000641104 BICD1Q96G01 975 aa13.69□□□□□ -0.22
MACF1-235ENST00000641104 LRRC2Q9BYS8 371 aa13.69□□□□□ -0.22
MACF1-235ENST00000641104 TMX1Q9H3N1 280 aa13.69□□□□□ -0.22
MACF1-235ENST00000641104 PAG1Q9NWQ8 432 aa13.69□□□□□ -0.22
MACF1-235ENST00000641104 POLR3AO14802 1390 aaPredicted RBP13.69□□□□□ -0.22
MACF1-235ENST00000641104 IL2RBP14784 551 aa13.69□□□□□ -0.22
MACF1-235ENST00000641104 SPAG1Q07617 926 aa13.69□□□□□ -0.22
MACF1-235ENST00000641104 IQSEC3Q9UPP2 1182 aaPredicted RBP13.69□□□□□ -0.22
MACF1-235ENST00000641104 PRPF4BQ13523 1007 aaKnown RBP13.69□□□□□ -0.22
MACF1-235ENST00000641104 MTHFSDQ2M296 383 aaKnown RBP13.69□□□□□ -0.22
MACF1-235ENST00000641104 OGFOD1Q8N543 542 aa13.69□□□□□ -0.22
MACF1-235ENST00000641104 MRPS27Q92552 414 aaKnown RBP13.69□□□□□ -0.22
MACF1-235ENST00000641104 HEATR3Q7Z4Q2 680 aa13.69□□□□□ -0.22
MACF1-235ENST00000641104 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
MACF1-235ENST00000641104 AKR1B10O60218 316 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 CALM1P0DP23 149 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 CALM2P0DP24 149 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 CALM3P0DP25 149 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 GOLGA6L10A0A0M3HER8 536 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 ZSCAN23Q3MJ62 389 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 DZIP3Q86Y13 1208 aaKnown RBP13.68□□□□□ -0.22
MACF1-235ENST00000641104 TMEM87AQ8NBN3 555 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 PUF60Q9UHX1 559 aaKnown RBP13.68□□□□□ -0.22
MACF1-235ENST00000641104 MAGEB6P1A0A0J9YX57 407 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 GIMAP6Q6P9H5 292 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 LRSAM1Q6UWE0 723 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 FERMT1Q9BQL6 677 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 BCCIPQ9P287 314 aaKnown RBP eCLIP13.68□□□□□ -0.22
MACF1-235ENST00000641104 UBASH3AP57075 661 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 TBC1D5Q92609 795 aa13.68□□□□□ -0.22
MACF1-235ENST00000641104 AFMP43652 599 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 TCEANC2Q96MN5 208 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 HCLS1P14317 486 aaPredicted RBP13.67□□□□□ -0.22
MACF1-235ENST00000641104 NMIQ13287 307 aaPredicted RBP13.67□□□□□ -0.22
MACF1-235ENST00000641104 TPTE2Q6XPS3 522 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 SPAG5Q96R06 1193 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 JADE2Q9NQC1 790 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 NAPAP54920 295 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 SIRT1Q96EB6 747 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 STAMBPO95630 424 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 RAPGEF6Q8TEU7 1601 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 RTL9Q8NET4 1388 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 F8W031 263 aaPredicted RBP13.67□□□□□ -0.22
MACF1-235ENST00000641104 RNF113AO15541 343 aaKnown RBP13.67□□□□□ -0.22
MACF1-235ENST00000641104 PLCG2P16885 1265 aa13.67□□□□□ -0.22
MACF1-235ENST00000641104 PRAG1Q86YV5 1406 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 GNG11P61952 73 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 C6orf50Q9HD87 102 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 ACTN2P35609 894 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 CYLC1P35663 651 aaPredicted RBP13.66□□□□□ -0.22
MACF1-235ENST00000641104 PICALMQ13492 652 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 NFATC2IPQ8NCF5 419 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 PLVAPQ9BX97 442 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 PA2G4Q9UQ80 394 aaKnown RBP13.66□□□□□ -0.22
MACF1-235ENST00000641104 MAP3K5Q99683 1374 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 ASXL2Q76L83 1435 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 PSMA7O14818 248 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 KRT13P13646 458 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 CALML3P27482 149 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 MICALCLQ6ZW33 695 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 DRC1Q96MC2 740 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 DHX37Q8IY37 1157 aaKnown RBP13.66□□□□□ -0.22
MACF1-235ENST00000641104 SMARCC2Q8TAQ2 1214 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 LRRC59Q96AG4 307 aaKnown RBP13.66□□□□□ -0.22
MACF1-235ENST00000641104 DCAF5Q96JK2 942 aa13.66□□□□□ -0.22
MACF1-235ENST00000641104 F13A1P00488 732 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 ATP10BO94823 1461 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 NPATQ14207 1427 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 SNX21Q969T3 373 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 PAXBP1Q9Y5B6 917 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 SOS1Q07889 1333 aaPredicted RBP13.65□□□□□ -0.22
MACF1-235ENST00000641104 CCDC171Q6TFL3 1326 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 FSD2A1L4K1 749 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 TRIM75PA6NK02 468 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 CEP135Q66GS9 1140 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 PARD3Q8TEW0 1356 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 UBAP1LF5GYI3 381 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 IRS4O14654 1257 aaPredicted RBP13.65□□□□□ -0.22
MACF1-235ENST00000641104 USP48Q86UV5 1035 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 FAM200AQ8TCP9 573 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 DCTPP1Q9H773 170 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 MMRN2Q9H8L6 949 aa13.65□□□□□ -0.22
MACF1-235ENST00000641104 ANO6Q4KMQ2 910 aa13.64□□□□□ -0.23
MACF1-235ENST00000641104 C19orf44Q9H6X5 657 aa13.64□□□□□ -0.23
MACF1-235ENST00000641104 ZFYVE9O95405 1425 aa13.64□□□□□ -0.23
MACF1-235ENST00000641104 ITSN2Q9NZM3 1697 aa13.64□□□□□ -0.23
MACF1-235ENST00000641104 CCDC175P0C221 793 aa13.64□□□□□ -0.23
MACF1-235ENST00000641104 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
MACF1-235ENST00000641104 ZC3H12CQ9C0D7 883 aaKnown RBP13.64□□□□□ -0.23
MACF1-235ENST00000641104 VAMP4O75379 141 aa13.64□□□□□ -0.23
MACF1-235ENST00000641104 ASIC1P78348 528 aa13.64□□□□□ -0.23
MACF1-235ENST00000641104 CKAP4Q07065 602 aaKnown RBP13.64□□□□□ -0.23
MACF1-235ENST00000641104 UBE4AQ14139 1066 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms