RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
PHGDH-209ENST00000641074 EDC3Q96F86 508 aaKnown RBP22.15■■□□□ 1.14
PHGDH-209ENST00000641074 IGHMBP2P38935 993 aaKnown RBP22.15■■□□□ 1.14
PHGDH-209ENST00000641074 AKT1S1Q96B36 256 aa22.15■■□□□ 1.14
PHGDH-209ENST00000641074 KIF2CQ99661 725 aa22.15■■□□□ 1.14
PHGDH-209ENST00000641074 NDUFB9Q9Y6M9 179 aa22.15■■□□□ 1.14
PHGDH-209ENST00000641074 CASZ1Q86V15 1759 aa22.14■■□□□ 1.13
PHGDH-209ENST00000641074 COL4A1P02462 1669 aa22.14■■□□□ 1.13
PHGDH-209ENST00000641074 CWC27Q6UX04 472 aaKnown RBP22.14■■□□□ 1.13
PHGDH-209ENST00000641074 NLRP3Q96P20 1036 aa22.14■■□□□ 1.13
PHGDH-209ENST00000641074 CDC5LQ99459 802 aaKnown RBP22.14■■□□□ 1.13
PHGDH-209ENST00000641074 DIAPH3Q9NSV4 1193 aa22.14■■□□□ 1.13
PHGDH-209ENST00000641074 TFCP2L1Q9NZI6 479 aa22.14■■□□□ 1.13
PHGDH-209ENST00000641074 SGSM2O43147 1006 aa22.13■■□□□ 1.13
PHGDH-209ENST00000641074 HELBQ8NG08 1087 aaPredicted RBP22.13■■□□□ 1.13
PHGDH-209ENST00000641074 DNAJC2Q99543 621 aaKnown RBP22.13■■□□□ 1.13
PHGDH-209ENST00000641074 FSD1Q9BTV5 496 aa22.13■■□□□ 1.13
PHGDH-209ENST00000641074 SLC4A3P48751 1232 aa22.12■■□□□ 1.13
PHGDH-209ENST00000641074 GORABQ5T7V8 394 aa22.12■■□□□ 1.13
PHGDH-209ENST00000641074 ANO2Q9NQ90 1003 aa22.12■■□□□ 1.13
PHGDH-209ENST00000641074 SPEF2Q9C093 1822 aa22.12■■□□□ 1.13
PHGDH-209ENST00000641074 CCDC158Q5M9N0 1113 aa22.12■■□□□ 1.13
PHGDH-209ENST00000641074 NPHP1O15259 732 aa22.11■■□□□ 1.13
PHGDH-209ENST00000641074 TM4SF1P30408 202 aa22.11■■□□□ 1.13
PHGDH-209ENST00000641074 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.11■■□□□ 1.13
PHGDH-209ENST00000641074 HIP1O00291 1037 aa22.1■■□□□ 1.13
PHGDH-209ENST00000641074 IFIT1P09914 478 aaKnown RBP22.1■■□□□ 1.13
PHGDH-209ENST00000641074 FGFR2P21802 821 aa22.1■■□□□ 1.13
PHGDH-209ENST00000641074 PUM3Q15397 648 aaKnown RBP22.1■■□□□ 1.13
PHGDH-209ENST00000641074 TTC39AQ5SRH9 613 aa22.1■■□□□ 1.13
PHGDH-209ENST00000641074 ANKRD18AQ8IVF6 992 aa22.1■■□□□ 1.13
PHGDH-209ENST00000641074 CNBD1Q8NA66 436 aa22.1■■□□□ 1.13
PHGDH-209ENST00000641074 RUFY2Q8WXA3 655 aa22.1■■□□□ 1.13
PHGDH-209ENST00000641074 TAF5LO75529 589 aa22.1■■□□□ 1.13
PHGDH-209ENST00000641074 DAXXQ9UER7 740 aaPredicted RBP22.1■■□□□ 1.13
PHGDH-209ENST00000641074 RGPD3A6NKT7 1758 aaPredicted RBP22.09■■□□□ 1.13
PHGDH-209ENST00000641074 RGPD4Q7Z3J3 1758 aa22.09■■□□□ 1.13
PHGDH-209ENST00000641074 DDX46Q7L014 1031 aaKnown RBP22.09■■□□□ 1.13
PHGDH-209ENST00000641074 COL23A1Q86Y22 540 aaPredicted RBP22.09■■□□□ 1.13
PHGDH-209ENST00000641074 LPIN2Q92539 896 aa22.09■■□□□ 1.13
PHGDH-209ENST00000641074 TAF1P21675 1872 aa22.09■■□□□ 1.13
PHGDH-209ENST00000641074 GOLIM4O00461 696 aa22.08■■□□□ 1.13
PHGDH-209ENST00000641074 CHRNDQ07001 517 aa22.08■■□□□ 1.13
PHGDH-209ENST00000641074 NMIQ13287 307 aaPredicted RBP22.08■■□□□ 1.13
PHGDH-209ENST00000641074 BECN1Q14457 450 aa22.08■■□□□ 1.13
PHGDH-209ENST00000641074 PRR5LQ6MZQ0 368 aa22.08■■□□□ 1.13
PHGDH-209ENST00000641074 CELF1Q92879 486 aaKnown RBP22.08■■□□□ 1.13
PHGDH-209ENST00000641074 FAM227BQ96M60 508 aa22.08■■□□□ 1.13
PHGDH-209ENST00000641074 PAG1Q9NWQ8 432 aa22.08■■□□□ 1.13
PHGDH-209ENST00000641074 TNRC6CQ9HCJ0 1690 aaKnown RBP22.08■■□□□ 1.12
PHGDH-209ENST00000641074 SERPINB2P05120 415 aa22.07■■□□□ 1.12
PHGDH-209ENST00000641074 TBC1D2Q9BYX2 928 aa22.07■■□□□ 1.12
PHGDH-209ENST00000641074 BSDC1Q9NW68 430 aaPredicted RBP22.07■■□□□ 1.12
PHGDH-209ENST00000641074 SNAP23O00161 211 aa22.07■■□□□ 1.12
PHGDH-209ENST00000641074 EPB41L2O43491 1005 aaKnown RBP22.07■■□□□ 1.12
PHGDH-209ENST00000641074 KBTBD3Q8NAB2 608 aa22.07■■□□□ 1.12
PHGDH-209ENST00000641074 RFX7Q2KHR2 1363 aa22.06■■□□□ 1.12
PHGDH-209ENST00000641074 DDR1Q08345 913 aa22.06■■□□□ 1.12
PHGDH-209ENST00000641074 SCARF1Q14162 830 aa22.06■■□□□ 1.12
PHGDH-209ENST00000641074 LSG1Q9H089 658 aaKnown RBP22.06■■□□□ 1.12
PHGDH-209ENST00000641074 A0A0D9SFI3 127 aa22.05■■□□□ 1.12
PHGDH-209ENST00000641074 SLC5A1P13866 664 aa22.05■■□□□ 1.12
PHGDH-209ENST00000641074 RPS8P62241 208 aaKnown RBP22.05■■□□□ 1.12
PHGDH-209ENST00000641074 SNRKQ9NRH2 765 aa22.05■■□□□ 1.12
PHGDH-209ENST00000641074 POLRMTO00411 1230 aaKnown RBP22.04■■□□□ 1.12
PHGDH-209ENST00000641074 FKBP4Q02790 459 aaKnown RBP eCLIP22.04■■□□□ 1.12
PHGDH-209ENST00000641074 EN1Q05925 392 aaPredicted RBP22.04■■□□□ 1.12
PHGDH-209ENST00000641074 EZH2Q15910 746 aaKnown RBP22.04■■□□□ 1.12
PHGDH-209ENST00000641074 KIAA1211Q6ZU35 1233 aa22.04■■□□□ 1.12
PHGDH-209ENST00000641074 FLAD1Q8NFF5 587 aa22.04■■□□□ 1.12
PHGDH-209ENST00000641074 ZNF512BQ96KM6 892 aaPredicted RBP22.04■■□□□ 1.12
PHGDH-209ENST00000641074 CAMKK2Q96RR4 588 aa22.04■■□□□ 1.12
PHGDH-209ENST00000641074 ARAP2Q8WZ64 1704 aa22.04■■□□□ 1.12
PHGDH-209ENST00000641074 CCDC102BQ68D86 513 aa22.04■■□□□ 1.12
PHGDH-209ENST00000641074 ANTXR1Q9H6X2 564 aa22.04■■□□□ 1.12
PHGDH-209ENST00000641074 MINPP1Q9UNW1 487 aa22.04■■□□□ 1.12
PHGDH-209ENST00000641074 RAD50Q92878 1312 aa22.04■■□□□ 1.12
PHGDH-209ENST00000641074 CHGBP05060 677 aa22.03■■□□□ 1.12
PHGDH-209ENST00000641074 MCCP23508 829 aa22.03■■□□□ 1.12
PHGDH-209ENST00000641074 PHKA1P46020 1223 aa22.03■■□□□ 1.12
PHGDH-209ENST00000641074 PNPLA7Q6ZV29 1317 aa22.03■■□□□ 1.12
PHGDH-209ENST00000641074 MCAMP43121 646 aa22.02■■□□□ 1.12
PHGDH-209ENST00000641074 ZAP70P43403 619 aa22.02■■□□□ 1.12
PHGDH-209ENST00000641074 ST5P78524 1137 aa22.02■■□□□ 1.12
PHGDH-209ENST00000641074 RABEP1Q15276 862 aa22.02■■□□□ 1.12
PHGDH-209ENST00000641074 NLGN1Q8N2Q7 840 aa22.02■■□□□ 1.12
PHGDH-209ENST00000641074 PI16Q6UXB8 463 aa22.02■■□□□ 1.11
PHGDH-209ENST00000641074 TICAM2Q86XR7 235 aa22.02■■□□□ 1.11
PHGDH-209ENST00000641074 SNX21Q969T3 373 aa22.02■■□□□ 1.11
PHGDH-209ENST00000641074 PALD1Q9ULE6 856 aa22.02■■□□□ 1.11
PHGDH-209ENST00000641074 ARID4AP29374 1257 aaPredicted RBP22.01■■□□□ 1.11
PHGDH-209ENST00000641074 HSPA4P34932 840 aa22.01■■□□□ 1.11
PHGDH-209ENST00000641074 PTH1RQ03431 593 aa22.01■■□□□ 1.11
PHGDH-209ENST00000641074 MED23Q9ULK4 1368 aa22.01■■□□□ 1.11
PHGDH-209ENST00000641074 A0A1B0GUL6 1792 aa22.01■■□□□ 1.11
PHGDH-209ENST00000641074 AKAP11Q9UKA4 1901 aa22■■□□□ 1.11
PHGDH-209ENST00000641074 UQCRFS1P1P0C7P4 283 aa22■■□□□ 1.11
PHGDH-209ENST00000641074 ANAPC15P60006 121 aa21.99■■□□□ 1.11
PHGDH-209ENST00000641074 ZNF589Q86UQ0 364 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-209ENST00000641074 ANO8Q9HCE9 1232 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms