RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 A0A0C4DFX4 3053 aa10.92□□□□□ -0.66
SCARB2-226ENST00000640916 RBM26Q5T8P6 1007 aaKnown RBP10.92□□□□□ -0.66
SCARB2-226ENST00000640916 NGEFQ8N5V2 710 aa10.92□□□□□ -0.66
SCARB2-226ENST00000640916 TSPYL2Q9H2G4 693 aaPredicted RBP10.92□□□□□ -0.66
SCARB2-226ENST00000640916 TRIOBPQ9H2D6 2365 aa10.91□□□□□ -0.66
SCARB2-226ENST00000640916 BBOX1O75936 387 aa10.91□□□□□ -0.66
SCARB2-226ENST00000640916 OTUD5Q96G74 571 aa10.91□□□□□ -0.66
SCARB2-226ENST00000640916 CFHR5Q9BXR6 569 aa10.91□□□□□ -0.66
SCARB2-226ENST00000640916 GGA3Q9NZ52 723 aa10.91□□□□□ -0.66
SCARB2-226ENST00000640916 COL4A1P02462 1669 aa10.91□□□□□ -0.66
SCARB2-226ENST00000640916 EN2P19622 333 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-226ENST00000640916 DCAF8Q5TAQ9 597 aa10.9□□□□□ -0.66
SCARB2-226ENST00000640916 MCM10Q7L590 875 aa10.9□□□□□ -0.66
SCARB2-226ENST00000640916 RNF25Q96BH1 459 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-226ENST00000640916 NLRP3Q96P20 1036 aa10.9□□□□□ -0.66
SCARB2-226ENST00000640916 DBNDD1Q9H9R9 158 aa10.9□□□□□ -0.66
SCARB2-226ENST00000640916 KNSTRNQ9Y448 316 aa10.9□□□□□ -0.66
SCARB2-226ENST00000640916 KDM3BQ7LBC6 1761 aa10.9□□□□□ -0.67
SCARB2-226ENST00000640916 DDX60Q8IY21 1712 aaKnown RBP10.89□□□□□ -0.67
SCARB2-226ENST00000640916 PSME4Q14997 1843 aa10.89□□□□□ -0.67
SCARB2-226ENST00000640916 FKTNO75072 461 aa10.89□□□□□ -0.67
SCARB2-226ENST00000640916 RPS12P25398 132 aaKnown RBP10.89□□□□□ -0.67
SCARB2-226ENST00000640916 KIF4BQ2VIQ3 1234 aa10.89□□□□□ -0.67
SCARB2-226ENST00000640916 GIGYF2Q6Y7W6 1299 aaKnown RBP10.89□□□□□ -0.67
SCARB2-226ENST00000640916 SULF1Q8IWU6 871 aa10.89□□□□□ -0.67
SCARB2-226ENST00000640916 KIF12Q96FN5 646 aa10.89□□□□□ -0.67
SCARB2-226ENST00000640916 ZBTB3Q9H5J0 574 aa10.89□□□□□ -0.67
SCARB2-226ENST00000640916 RANBP2P49792 3224 aaKnown RBP10.89□□□□□ -0.67
SCARB2-226ENST00000640916 LAMB1P07942 1786 aa10.88□□□□□ -0.67
SCARB2-226ENST00000640916 UBE2Q2LH0YL09 131 aa10.88□□□□□ -0.67
SCARB2-226ENST00000640916 HAX1O00165 279 aa10.88□□□□□ -0.67
SCARB2-226ENST00000640916 FKBP1BP68106 108 aa10.88□□□□□ -0.67
SCARB2-226ENST00000640916 DCTN1Q14203 1278 aa10.88□□□□□ -0.67
SCARB2-226ENST00000640916 INTS3Q68E01 1043 aaKnown RBP10.88□□□□□ -0.67
SCARB2-226ENST00000640916 LRP10Q7Z4F1 713 aa10.88□□□□□ -0.67
SCARB2-226ENST00000640916 RSPH6AQ9H0K4 717 aa10.88□□□□□ -0.67
SCARB2-226ENST00000640916 TMX4Q9H1E5 349 aaPredicted RBP10.88□□□□□ -0.67
SCARB2-226ENST00000640916 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
SCARB2-226ENST00000640916 U2SURPO15042 1029 aaKnown RBP10.87□□□□□ -0.67
SCARB2-226ENST00000640916 PER1O15534 1290 aaPredicted RBP10.87□□□□□ -0.67
SCARB2-226ENST00000640916 VIL1P09327 827 aaKnown RBP10.87□□□□□ -0.67
SCARB2-226ENST00000640916 HSPA5P11021 654 aaKnown RBP10.87□□□□□ -0.67
SCARB2-226ENST00000640916 CAP1Q01518 475 aa10.87□□□□□ -0.67
SCARB2-226ENST00000640916 GRAPQ13588 217 aa10.87□□□□□ -0.67
SCARB2-226ENST00000640916 ANGEL2Q5VTE6 544 aaKnown RBP10.87□□□□□ -0.67
SCARB2-226ENST00000640916 OTOP1Q7RTM1 612 aa10.87□□□□□ -0.67
SCARB2-226ENST00000640916 PPP1R42Q7Z4L9 355 aa10.87□□□□□ -0.67
SCARB2-226ENST00000640916 GRAPLQ8TC17 118 aaPredicted RBP10.87□□□□□ -0.67
SCARB2-226ENST00000640916 MIS18AQ9NYP9 233 aa10.87□□□□□ -0.67
SCARB2-226ENST00000640916 POLLQ9UGP5 575 aa10.87□□□□□ -0.67
SCARB2-226ENST00000640916 SCAF8Q9UPN6 1271 aaKnown RBP10.87□□□□□ -0.67
SCARB2-226ENST00000640916 RRP7AQ9Y3A4 280 aaKnown RBP10.87□□□□□ -0.67
SCARB2-226ENST00000640916 CEP290O15078 2479 aa10.86□□□□□ -0.67
SCARB2-226ENST00000640916 ECE2O60344 883 aa10.86□□□□□ -0.67
SCARB2-226ENST00000640916 HCLS1P14317 486 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-226ENST00000640916 PRKAR2BP31323 418 aa10.86□□□□□ -0.67
SCARB2-226ENST00000640916 ZNF280AP59817 542 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-226ENST00000640916 SCARF1Q14162 830 aa10.86□□□□□ -0.67
SCARB2-226ENST00000640916 WASHC4Q2M389 1173 aa10.86□□□□□ -0.67
SCARB2-226ENST00000640916 KIF6Q6ZMV9 814 aa10.86□□□□□ -0.67
SCARB2-226ENST00000640916 SLC17A8Q8NDX2 589 aa10.86□□□□□ -0.67
SCARB2-226ENST00000640916 ARMC5Q96C12 935 aa10.86□□□□□ -0.67
SCARB2-226ENST00000640916 UTP14AQ9BVJ6 771 aaKnown RBP10.86□□□□□ -0.67
SCARB2-226ENST00000640916 ZNF609O15014 1411 aa10.85□□□□□ -0.67
SCARB2-226ENST00000640916 H0YGN5 161 aa10.85□□□□□ -0.67
SCARB2-226ENST00000640916 RIMBP2O15034 1052 aa10.85□□□□□ -0.67
SCARB2-226ENST00000640916 MYL6BP14649 208 aa10.85□□□□□ -0.67
SCARB2-226ENST00000640916 MKRN3Q13064 507 aaKnown RBP10.85□□□□□ -0.67
SCARB2-226ENST00000640916 DOK7Q18PE1 504 aa10.85□□□□□ -0.67
SCARB2-226ENST00000640916 PARP10Q53GL7 1025 aa10.85□□□□□ -0.67
SCARB2-226ENST00000640916 PRAMEF18Q5VWM3 479 aa10.85□□□□□ -0.67
SCARB2-226ENST00000640916 PHF12Q96QT6 1004 aa10.85□□□□□ -0.67
SCARB2-226ENST00000640916 TRIM17Q9Y577 477 aa10.85□□□□□ -0.67
SCARB2-226ENST00000640916 ZNF646O15015 1829 aaPredicted RBP10.85□□□□□ -0.67
SCARB2-226ENST00000640916 DLG5Q8TDM6 1919 aa10.85□□□□□ -0.67
SCARB2-226ENST00000640916 TAF7Q15545 349 aaPredicted RBP10.84□□□□□ -0.67
SCARB2-226ENST00000640916 GMLQ99445 158 aa10.84□□□□□ -0.67
SCARB2-226ENST00000640916 PTPN22Q9Y2R2 807 aa10.84□□□□□ -0.67
SCARB2-226ENST00000640916 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
SCARB2-226ENST00000640916 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
SCARB2-226ENST00000640916 PYGBP11216 843 aa10.83□□□□□ -0.68
SCARB2-226ENST00000640916 EIF4A1P60842 406 aaKnown RBP10.83□□□□□ -0.68
SCARB2-226ENST00000640916 GPSM2P81274 684 aa10.83□□□□□ -0.68
SCARB2-226ENST00000640916 PTPN12Q05209 780 aaKnown RBP10.83□□□□□ -0.68
SCARB2-226ENST00000640916 PDIA6Q15084 440 aa10.83□□□□□ -0.68
SCARB2-226ENST00000640916 DDX46Q7L014 1031 aaKnown RBP10.83□□□□□ -0.68
SCARB2-226ENST00000640916 CC2D1BQ5T0F9 858 aaKnown RBP10.82□□□□□ -0.68
SCARB2-226ENST00000640916 TMC4Q7Z404 712 aa10.82□□□□□ -0.68
SCARB2-226ENST00000640916 NLRP10Q86W26 655 aa10.82□□□□□ -0.68
SCARB2-226ENST00000640916 CELF1Q92879 486 aaKnown RBP10.82□□□□□ -0.68
SCARB2-226ENST00000640916 THUMPD2Q9BTF0 503 aaKnown RBP10.82□□□□□ -0.68
SCARB2-226ENST00000640916 PRO3102Q9H379 93 aa10.82□□□□□ -0.68
SCARB2-226ENST00000640916 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
SCARB2-226ENST00000640916 NSFL1CQ9UNZ2 370 aaKnown RBP10.82□□□□□ -0.68
SCARB2-226ENST00000640916 MAP3K13O43283 966 aa10.81□□□□□ -0.68
SCARB2-226ENST00000640916 HTATSF1O43719 755 aaKnown RBP10.81□□□□□ -0.68
SCARB2-226ENST00000640916 EIF4G2P78344 907 aaKnown RBP eCLIP10.81□□□□□ -0.68
SCARB2-226ENST00000640916 SREBF2Q12772 1141 aa10.81□□□□□ -0.68
SCARB2-226ENST00000640916 LDLRAD1Q5T700 205 aa10.81□□□□□ -0.68
SCARB2-226ENST00000640916 SPRYD7Q5W111 196 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms