RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	CUL4A	Q13619	759 aa		13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	LRRC24	Q50LG9	513 aa		13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	TRAPPC3L	Q5T215	181 aa		13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	RASEF	Q8IZ41	740 aa		13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	LINC00116	Q8NCU8	138 aa		13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	TMX3	Q96JJ7	454 aa		13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	FAM227B	Q96M60	508 aa		13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	FSD1	Q9BTV5	496 aa		13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	PUS3	Q9BZE2	481 aa	Known RBP	13.58	□□□□□ -0.24
GFAP-238	ENST00000640859	ZNF609	O15014	1411 aa		13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	PHF14	O94880	888 aa		13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	RFC4	P35249	363 aa		13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	GSE1	Q14687	1217 aa		13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	CLEC17A	Q6ZS10	378 aa		13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	DZIP3	Q86Y13	1208 aa	Known RBP	13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	ZNF34	Q8IZ26	560 aa		13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	AKT1S1	Q96B36	256 aa		13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	FAM89A	Q96GI7	184 aa		13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	ARX	Q96QS3	562 aa		13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	CCDC171	Q6TFL3	1326 aa		13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	MED23	Q9ULK4	1368 aa		13.57	□□□□□ -0.24
GFAP-238	ENST00000640859	MYH3	P11055	1940 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859		A0A0D9SFI3	127 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	PSD	A5PKW4	1024 aa	Predicted RBP	13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	ZPR1	O75312	459 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	RPS6KA4	O75676	772 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	CYP2E1	P05181	493 aa	Predicted RBP	13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	GPT	P24298	496 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	NECTIN1	Q15223	517 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	CCDC57	Q2TAC2	916 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	TICAM2	Q86XR7	235 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	SYNE4	Q8N205	404 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	SLC16A10	Q8TF71	515 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	MAP4K1	Q92918	833 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	EDC3	Q96F86	508 aa	Known RBP	13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	TTC14	Q96N46	770 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	MYH14	Q7Z406	1995 aa	Known RBP	13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	LY75	O60449	1722 aa		13.56	□□□□□ -0.24
GFAP-238	ENST00000640859	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	DDX11L8	A8MPP1	907 aa		13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	TIMM10	P62072	90 aa		13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	NUCB2	P80303	420 aa		13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	ZNF827	Q17R98	1081 aa		13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	ZGPAT	Q8N5A5	531 aa	Known RBP	13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	UPF3B	Q9BZI7	483 aa	Known RBP	13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	TM6SF1	Q9BZW5	370 aa		13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	CEP126	Q9P2H0	1117 aa		13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	TBC1D2B	Q9UPU7	963 aa		13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	ZNF831	Q5JPB2	1677 aa		13.55	□□□□□ -0.24
GFAP-238	ENST00000640859	POLD1	P28340	1107 aa		13.54	□□□□□ -0.24
GFAP-238	ENST00000640859	PRPF40B	Q6NWY9	871 aa	Known RBP	13.54	□□□□□ -0.24
GFAP-238	ENST00000640859	TTLL11	Q8NHH1	800 aa		13.54	□□□□□ -0.24
GFAP-238	ENST00000640859	INTS4	Q96HW7	963 aa	Known RBP	13.54	□□□□□ -0.24
GFAP-238	ENST00000640859	NEUROD6	Q96NK8	337 aa		13.54	□□□□□ -0.24
GFAP-238	ENST00000640859	GBP4	Q96PP9	640 aa		13.54	□□□□□ -0.24
GFAP-238	ENST00000640859	RBM8A	Q9Y5S9	174 aa	Known RBP	13.54	□□□□□ -0.24
GFAP-238	ENST00000640859	SPEF2	Q9C093	1822 aa		13.53	□□□□□ -0.24
GFAP-238	ENST00000640859		A0A1B0GUL7	405 aa		13.53	□□□□□ -0.24
GFAP-238	ENST00000640859	IRS4	O14654	1257 aa	Predicted RBP	13.53	□□□□□ -0.24
GFAP-238	ENST00000640859	CTSW	P56202	376 aa		13.53	□□□□□ -0.24
GFAP-238	ENST00000640859	IFIT5	Q13325	482 aa	Known RBP	13.53	□□□□□ -0.24
GFAP-238	ENST00000640859	CREB3L3	Q68CJ9	461 aa		13.53	□□□□□ -0.24
GFAP-238	ENST00000640859	KBTBD3	Q8NAB2	608 aa		13.53	□□□□□ -0.24
GFAP-238	ENST00000640859	TRMT112	Q9UI30	125 aa	Known RBP	13.53	□□□□□ -0.24
GFAP-238	ENST00000640859	RIPOR2	Q9Y4F9	1068 aa		13.53	□□□□□ -0.24
GFAP-238	ENST00000640859	UBN2	Q6ZU65	1347 aa		13.53	□□□□□ -0.24
GFAP-238	ENST00000640859	COL5A3	P25940	1745 aa	Predicted RBP	13.53	□□□□□ -0.24
GFAP-238	ENST00000640859	PDE8A	O60658	829 aa		13.52	□□□□□ -0.25
GFAP-238	ENST00000640859	TAF5L	O75529	589 aa		13.52	□□□□□ -0.25
GFAP-238	ENST00000640859	CAMTA2	O94983	1202 aa		13.52	□□□□□ -0.25
GFAP-238	ENST00000640859	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.52	□□□□□ -0.25
GFAP-238	ENST00000640859	DNAJC2	Q99543	621 aa	Known RBP	13.52	□□□□□ -0.25
GFAP-238	ENST00000640859	MTFR1L	Q9H019	292 aa		13.52	□□□□□ -0.25
GFAP-238	ENST00000640859	SPON1	Q9HCB6	807 aa		13.52	□□□□□ -0.25
GFAP-238	ENST00000640859	ZSWIM6	Q9HCJ5	1215 aa		13.52	□□□□□ -0.25
GFAP-238	ENST00000640859	AKAP2	Q9Y2D5	859 aa		13.52	□□□□□ -0.25
GFAP-238	ENST00000640859	C4B	P0C0L5	1744 aa		13.52	□□□□□ -0.25
GFAP-238	ENST00000640859	RIC1	Q4ADV7	1423 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	PNPLA7	Q6ZV29	1317 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	ANKRD18B	A2A2Z9	1011 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	SLC27A2	O14975	620 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	TRAK2	O60296	914 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	PTMS	P20962	102 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	ITGA6	P23229	1130 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	TAF7L	Q5H9L4	462 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	USPL1	Q5W0Q7	1092 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	NLGN1	Q8N2Q7	840 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	GREM2	Q9H772	168 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	PAG1	Q9NWQ8	432 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	ZNF652	Q9Y2D9	606 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	ZDHHC9	Q9Y397	364 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	NDUFB9	Q9Y6M9	179 aa		13.51	□□□□□ -0.25
GFAP-238	ENST00000640859	SH3TC1	Q8TE82	1336 aa		13.5	□□□□□ -0.25
GFAP-238	ENST00000640859	BAG4	O95429	457 aa	Known RBP	13.5	□□□□□ -0.25
GFAP-238	ENST00000640859	IFIT1	P09914	478 aa	Known RBP	13.5	□□□□□ -0.25
GFAP-238	ENST00000640859	AK2	P54819	239 aa		13.5	□□□□□ -0.25

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