RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 NFKBIEO00221 500 aa13.72□□□□□ -0.21
SCARB2-222ENST00000640634 PDE3AQ14432 1141 aa13.72□□□□□ -0.21
SCARB2-222ENST00000640634 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-222ENST00000640634 RPS8P62241 208 aaKnown RBP13.71□□□□□ -0.21
SCARB2-222ENST00000640634 ARHGAP27Q6ZUM4 889 aa13.71□□□□□ -0.21
SCARB2-222ENST00000640634 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.71□□□□□ -0.21
SCARB2-222ENST00000640634 CRBNQ96SW2 442 aa13.71□□□□□ -0.21
SCARB2-222ENST00000640634 FER1L6Q2WGJ9 1857 aa13.71□□□□□ -0.22
SCARB2-222ENST00000640634 GNAI3P08754 354 aa13.7□□□□□ -0.22
SCARB2-222ENST00000640634 GPR101Q96P66 508 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-222ENST00000640634 PUS3Q9BZE2 481 aaKnown RBP13.7□□□□□ -0.22
SCARB2-222ENST00000640634 ATP6V0A2Q9Y487 856 aa13.7□□□□□ -0.22
SCARB2-222ENST00000640634 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
SCARB2-222ENST00000640634 PNMA6EA0A0J9YXQ4 647 aa13.7□□□□□ -0.22
SCARB2-222ENST00000640634 GNAI2P04899 355 aa13.7□□□□□ -0.22
SCARB2-222ENST00000640634 RFX5P48382 616 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-222ENST00000640634 IFIT5Q13325 482 aaKnown RBP13.7□□□□□ -0.22
SCARB2-222ENST00000640634 ANKRD18AQ8IVF6 992 aa13.7□□□□□ -0.22
SCARB2-222ENST00000640634 PA2G4Q9UQ80 394 aaKnown RBP13.7□□□□□ -0.22
SCARB2-222ENST00000640634 COL4A5P29400 1685 aa13.69□□□□□ -0.22
SCARB2-222ENST00000640634 A0A1B0GUL6 1792 aa13.69□□□□□ -0.22
SCARB2-222ENST00000640634 ANKRD18BA2A2Z9 1011 aa13.69□□□□□ -0.22
SCARB2-222ENST00000640634 MS4A1P11836 297 aa13.69□□□□□ -0.22
SCARB2-222ENST00000640634 GPSM2P81274 684 aa13.69□□□□□ -0.22
SCARB2-222ENST00000640634 ZBTB40Q9NUA8 1239 aa13.69□□□□□ -0.22
SCARB2-222ENST00000640634 DDX19BQ9UMR2 479 aa13.69□□□□□ -0.22
SCARB2-222ENST00000640634 SNAP23O00161 211 aa13.68□□□□□ -0.22
SCARB2-222ENST00000640634 BBOX1O75936 387 aa13.68□□□□□ -0.22
SCARB2-222ENST00000640634 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-222ENST00000640634 CCDC57Q2TAC2 916 aa13.68□□□□□ -0.22
SCARB2-222ENST00000640634 LRRC24Q50LG9 513 aa13.68□□□□□ -0.22
SCARB2-222ENST00000640634 CCDC93Q567U6 631 aa13.68□□□□□ -0.22
SCARB2-222ENST00000640634 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
SCARB2-222ENST00000640634 SRGAP3O43295 1099 aa13.67□□□□□ -0.22
SCARB2-222ENST00000640634 SP8Q8IXZ3 490 aa13.67□□□□□ -0.22
SCARB2-222ENST00000640634 HELBQ8NG08 1087 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-222ENST00000640634 SIL1Q9H173 461 aa13.67□□□□□ -0.22
SCARB2-222ENST00000640634 ZNF277Q9NRM2 450 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-222ENST00000640634 PTPN12Q05209 780 aaKnown RBP13.67□□□□□ -0.22
SCARB2-222ENST00000640634 MINPP1Q9UNW1 487 aa13.67□□□□□ -0.22
SCARB2-222ENST00000640634 NSFL1CQ9UNZ2 370 aaKnown RBP13.67□□□□□ -0.22
SCARB2-222ENST00000640634 GRIN3BO60391 1043 aa13.66□□□□□ -0.22
SCARB2-222ENST00000640634 TAF5LO75529 589 aa13.66□□□□□ -0.22
SCARB2-222ENST00000640634 IGHMBP2P38935 993 aaKnown RBP13.66□□□□□ -0.22
SCARB2-222ENST00000640634 TAF7LQ5H9L4 462 aa13.66□□□□□ -0.22
SCARB2-222ENST00000640634 CEP85Q6P2H3 762 aa13.66□□□□□ -0.22
SCARB2-222ENST00000640634 SIRT2Q8IXJ6 389 aa13.66□□□□□ -0.22
SCARB2-222ENST00000640634 TAOK3Q9H2K8 898 aa13.66□□□□□ -0.22
SCARB2-222ENST00000640634 BSDC1Q9NW68 430 aaPredicted RBP13.66□□□□□ -0.22
SCARB2-222ENST00000640634 SBF1O95248 1867 aa13.66□□□□□ -0.22
SCARB2-222ENST00000640634 KLRK1P26718 216 aa13.65□□□□□ -0.22
SCARB2-222ENST00000640634 MTX1Q13505 466 aa13.65□□□□□ -0.22
SCARB2-222ENST00000640634 DPP8Q6V1X1 898 aaPredicted RBP13.65□□□□□ -0.22
SCARB2-222ENST00000640634 LDHAL6AQ6ZMR3 332 aa13.65□□□□□ -0.22
SCARB2-222ENST00000640634 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
SCARB2-222ENST00000640634 MPHOSPH8Q99549 860 aa13.65□□□□□ -0.22
SCARB2-222ENST00000640634 POLLQ9UGP5 575 aa13.65□□□□□ -0.22
SCARB2-222ENST00000640634 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.65□□□□□ -0.22
SCARB2-222ENST00000640634 CCDC88AQ3V6T2 1871 aa13.65□□□□□ -0.22
SCARB2-222ENST00000640634 FKBP4Q02790 459 aaKnown RBP eCLIP13.64□□□□□ -0.23
SCARB2-222ENST00000640634 CHRNDQ07001 517 aa13.64□□□□□ -0.23
SCARB2-222ENST00000640634 MPNDQ8N594 471 aa13.64□□□□□ -0.23
SCARB2-222ENST00000640634 CNNM1Q9NRU3 951 aa13.64□□□□□ -0.23
SCARB2-222ENST00000640634 TIAM2Q8IVF5 1701 aa13.64□□□□□ -0.23
SCARB2-222ENST00000640634 ATG9AQ7Z3C6 839 aa13.64□□□□□ -0.23
SCARB2-222ENST00000640634 TBC1D16Q8TBP0 767 aa13.64□□□□□ -0.23
SCARB2-222ENST00000640634 ANKIB1Q9P2G1 1089 aa13.64□□□□□ -0.23
SCARB2-222ENST00000640634 DCAF8L1A6NGE4 600 aa13.63□□□□□ -0.23
SCARB2-222ENST00000640634 UFL1O94874 794 aa13.63□□□□□ -0.23
SCARB2-222ENST00000640634 AOC3Q16853 763 aa13.63□□□□□ -0.23
SCARB2-222ENST00000640634 SOGA3Q5TF21 947 aa13.63□□□□□ -0.23
SCARB2-222ENST00000640634 C9orf131Q5VYM1 1079 aa13.63□□□□□ -0.23
SCARB2-222ENST00000640634 RTKN2Q8IZC4 609 aa13.63□□□□□ -0.23
SCARB2-222ENST00000640634 RNF181Q9P0P0 153 aa13.63□□□□□ -0.23
SCARB2-222ENST00000640634 RIPOR2Q9Y4F9 1068 aa13.63□□□□□ -0.23
SCARB2-222ENST00000640634 C6orf229H3BNL8 230 aa13.62□□□□□ -0.23
SCARB2-222ENST00000640634 RIMBP2O15034 1052 aa13.62□□□□□ -0.23
SCARB2-222ENST00000640634 ATP8B2P98198 1209 aa13.62□□□□□ -0.23
SCARB2-222ENST00000640634 POLA2Q14181 598 aa13.62□□□□□ -0.23
SCARB2-222ENST00000640634 TMC4Q7Z404 712 aa13.62□□□□□ -0.23
SCARB2-222ENST00000640634 TXNRD3Q86VQ6 643 aa13.62□□□□□ -0.23
SCARB2-222ENST00000640634 SSH3Q8TE77 659 aa13.62□□□□□ -0.23
SCARB2-222ENST00000640634 PSMD1Q99460 953 aa13.62□□□□□ -0.23
SCARB2-222ENST00000640634 PCDHB15Q9Y5E8 787 aa13.62□□□□□ -0.23
SCARB2-222ENST00000640634 XDHP47989 1333 aa13.62□□□□□ -0.23
SCARB2-222ENST00000640634 LTBP3Q9NS15 1303 aa13.62□□□□□ -0.23
SCARB2-222ENST00000640634 EYA2O00167 538 aa13.61□□□□□ -0.23
SCARB2-222ENST00000640634 CC2D2BQ6DHV5 1058 aa13.61□□□□□ -0.23
SCARB2-222ENST00000640634 RTFDC1Q9BY42 306 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-222ENST00000640634 COPRSQ9NQ92 184 aa13.61□□□□□ -0.23
SCARB2-222ENST00000640634 LMNB1P20700 586 aa13.61□□□□□ -0.23
SCARB2-222ENST00000640634 IARSP41252 1262 aaKnown RBP13.61□□□□□ -0.23
SCARB2-222ENST00000640634 VGLL2Q8N8G2 317 aa13.61□□□□□ -0.23
SCARB2-222ENST00000640634 TMX4Q9H1E5 349 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-222ENST00000640634 HDAC5Q9UQL6 1122 aa13.61□□□□□ -0.23
SCARB2-222ENST00000640634 PPIP5K2O43314 1243 aa13.6□□□□□ -0.23
SCARB2-222ENST00000640634 METTL24Q5JXM2 366 aa13.6□□□□□ -0.23
SCARB2-222ENST00000640634 GGA1Q9UJY5 639 aa13.6□□□□□ -0.23
SCARB2-222ENST00000640634 EXOC6BQ9Y2D4 811 aa13.6□□□□□ -0.23
SCARB2-222ENST00000640634 CHD4Q14839 1912 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms