RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 TCHHQ07283 1943 aa14.65□□□□□ -0.06
SPIN3-236ENST00000640131 DDX46Q7L014 1031 aaKnown RBP14.65□□□□□ -0.06
SPIN3-236ENST00000640131 ZNF589Q86UQ0 364 aaPredicted RBP14.65□□□□□ -0.06
SPIN3-236ENST00000640131 SEC62Q99442 399 aaKnown RBP14.65□□□□□ -0.06
SPIN3-236ENST00000640131 TMX1Q9H3N1 280 aa14.65□□□□□ -0.06
SPIN3-236ENST00000640131 BTG4Q9NY30 223 aa14.65□□□□□ -0.06
SPIN3-236ENST00000640131 ASAP1Q9ULH1 1129 aa14.65□□□□□ -0.06
SPIN3-236ENST00000640131 ADAMTS7Q9UKP4 1686 aa14.65□□□□□ -0.06
SPIN3-236ENST00000640131 NOLC1Q14978 699 aaKnown RBP eCLIP14.64□□□□□ -0.07
SPIN3-236ENST00000640131 UTYO14607 1347 aa14.64□□□□□ -0.07
SPIN3-236ENST00000640131 NOP2P46087 812 aaKnown RBP14.64□□□□□ -0.07
SPIN3-236ENST00000640131 RUFY3Q7L099 469 aa14.64□□□□□ -0.07
SPIN3-236ENST00000640131 CCDC83Q8IWF9 413 aa14.64□□□□□ -0.07
SPIN3-236ENST00000640131 NECAB1Q8N987 351 aa14.64□□□□□ -0.07
SPIN3-236ENST00000640131 EVI5LQ96CN4 794 aa14.64□□□□□ -0.07
SPIN3-236ENST00000640131 CWC22Q9HCG8 908 aaKnown RBP14.64□□□□□ -0.07
SPIN3-236ENST00000640131 RBM8AQ9Y5S9 174 aaKnown RBP14.64□□□□□ -0.07
SPIN3-236ENST00000640131 COL5A2P05997 1499 aaPredicted RBP14.63□□□□□ -0.07
SPIN3-236ENST00000640131 ANAPC15P60006 121 aa14.63□□□□□ -0.07
SPIN3-236ENST00000640131 TIMM10P62072 90 aa14.63□□□□□ -0.07
SPIN3-236ENST00000640131 ZSCAN23Q3MJ62 389 aa14.63□□□□□ -0.07
SPIN3-236ENST00000640131 NCAPGQ9BPX3 1015 aa14.63□□□□□ -0.07
SPIN3-236ENST00000640131 PRIM1P49642 420 aaKnown RBP14.63□□□□□ -0.07
SPIN3-236ENST00000640131 SYNE4Q8N205 404 aa14.63□□□□□ -0.07
SPIN3-236ENST00000640131 GPT2Q8TD30 523 aa14.63□□□□□ -0.07
SPIN3-236ENST00000640131 ARFGEF2Q9Y6D5 1785 aa14.63□□□□□ -0.07
SPIN3-236ENST00000640131 PLBD2Q8NHP8 589 aa14.62□□□□□ -0.07
SPIN3-236ENST00000640131 CPDO75976 1380 aa14.62□□□□□ -0.07
SPIN3-236ENST00000640131 GPTP24298 496 aa14.62□□□□□ -0.07
SPIN3-236ENST00000640131 RFX5P48382 616 aaPredicted RBP14.62□□□□□ -0.07
SPIN3-236ENST00000640131 TNNI3KQ59H18 835 aa14.62□□□□□ -0.07
SPIN3-236ENST00000640131 RUFY2Q8WXA3 655 aa14.62□□□□□ -0.07
SPIN3-236ENST00000640131 PIBF1Q8WXW3 757 aa14.62□□□□□ -0.07
SPIN3-236ENST00000640131 FPGT-TNNI3KV9GXZ4 949 aa14.62□□□□□ -0.07
SPIN3-236ENST00000640131 LRRC24Q50LG9 513 aa14.62□□□□□ -0.07
SPIN3-236ENST00000640131 DNAJC10Q8IXB1 793 aa14.62□□□□□ -0.07
SPIN3-236ENST00000640131 CTNNA3Q9UI47 895 aa14.62□□□□□ -0.07
SPIN3-236ENST00000640131 CEP83Q9Y592 693 aa14.62□□□□□ -0.07
SPIN3-236ENST00000640131 SOS2Q07890 1332 aaPredicted RBP14.61□□□□□ -0.07
SPIN3-236ENST00000640131 CCDC171Q6TFL3 1326 aa14.61□□□□□ -0.07
SPIN3-236ENST00000640131 USP42Q9H9J4 1324 aaKnown RBP14.61□□□□□ -0.07
SPIN3-236ENST00000640131 STRCQ7RTU9 1775 aa14.61□□□□□ -0.07
SPIN3-236ENST00000640131 DHX16O60231 1041 aaKnown RBP14.61□□□□□ -0.07
SPIN3-236ENST00000640131 STK3Q13188 491 aa14.61□□□□□ -0.07
SPIN3-236ENST00000640131 PUS3Q9BZE2 481 aaKnown RBP14.61□□□□□ -0.07
SPIN3-236ENST00000640131 TMOD3Q9NYL9 352 aa14.61□□□□□ -0.07
SPIN3-236ENST00000640131 DDX41Q9UJV9 622 aaKnown RBP14.61□□□□□ -0.07
SPIN3-236ENST00000640131 PKD1L3Q7Z443 1732 aa14.6□□□□□ -0.07
SPIN3-236ENST00000640131 RAD51AP2Q09MP3 1159 aa14.6□□□□□ -0.07
SPIN3-236ENST00000640131 CUL4AQ13619 759 aa14.6□□□□□ -0.07
SPIN3-236ENST00000640131 PDRG1Q9NUG6 133 aa14.6□□□□□ -0.07
SPIN3-236ENST00000640131 LMTK3Q96Q04 1460 aa14.6□□□□□ -0.07
SPIN3-236ENST00000640131 RIOK3O14730 519 aaKnown RBP14.6□□□□□ -0.07
SPIN3-236ENST00000640131 PPFIA3O75145 1194 aa14.6□□□□□ -0.07
SPIN3-236ENST00000640131 CREB3L3Q68CJ9 461 aa14.6□□□□□ -0.07
SPIN3-236ENST00000640131 FAM89AQ96GI7 184 aa14.6□□□□□ -0.07
SPIN3-236ENST00000640131 CWC25Q9NXE8 425 aaPredicted RBP14.6□□□□□ -0.07
SPIN3-236ENST00000640131 MCM2P49736 904 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 TICAM2Q86XR7 235 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 TTC14Q96N46 770 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 GADD45BO75293 160 aaPredicted RBP14.59□□□□□ -0.07
SPIN3-236ENST00000640131 HNRNPH2P55795 449 aaKnown RBP14.59□□□□□ -0.07
SPIN3-236ENST00000640131 FOXO4P98177 505 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 LRRC2Q9BYS8 371 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 SNRKQ9NRH2 765 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 GOLIM4O00461 696 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 BRD1O95696 1058 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 CASP7P55210 303 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 HSP90AB3PQ58FF7 597 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 ICE2Q659A1 982 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 C17orf53Q8N3J3 647 aaPredicted RBP14.59□□□□□ -0.07
SPIN3-236ENST00000640131 GPATCH11Q8N954 259 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 PIGBQ92521 554 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 RASSF4Q9H2L5 321 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 COPRSQ9NQ92 184 aa14.59□□□□□ -0.07
SPIN3-236ENST00000640131 MORC2Q9Y6X9 1032 aaPredicted RBP14.59□□□□□ -0.07
SPIN3-236ENST00000640131 SYCE3A1L190 88 aa14.58□□□□□ -0.08
SPIN3-236ENST00000640131 ADAMTS2O95450 1211 aa14.58□□□□□ -0.08
SPIN3-236ENST00000640131 CCDC172P0C7W6 258 aa14.58□□□□□ -0.08
SPIN3-236ENST00000640131 CHAF1AQ13111 956 aaPredicted RBP14.58□□□□□ -0.08
SPIN3-236ENST00000640131 TMEM63CQ9P1W3 806 aa14.58□□□□□ -0.08
SPIN3-236ENST00000640131 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.58□□□□□ -0.08
SPIN3-236ENST00000640131 MRC1P22897 1456 aa14.58□□□□□ -0.08
SPIN3-236ENST00000640131 SLC27A2O14975 620 aa14.58□□□□□ -0.08
SPIN3-236ENST00000640131 CTR9Q6PD62 1173 aa14.58□□□□□ -0.08
SPIN3-236ENST00000640131 LIMCH1Q9UPQ0 1083 aa14.58□□□□□ -0.08
SPIN3-236ENST00000640131 CYP46A1Q9Y6A2 500 aa14.58□□□□□ -0.08
SPIN3-236ENST00000640131 CEP120Q8N960 986 aa14.57□□□□□ -0.08
SPIN3-236ENST00000640131 SMC3Q9UQE7 1217 aa14.57□□□□□ -0.08
SPIN3-236ENST00000640131 GLI3P10071 1580 aa14.57□□□□□ -0.08
SPIN3-236ENST00000640131 VPS37CA5D8V6 355 aaPredicted RBP14.57□□□□□ -0.08
SPIN3-236ENST00000640131 ZKSCAN1P17029 563 aaPredicted RBP14.57□□□□□ -0.08
SPIN3-236ENST00000640131 KRT222Q8N1A0 295 aa14.57□□□□□ -0.08
SPIN3-236ENST00000640131 MPNDQ8N594 471 aa14.57□□□□□ -0.08
SPIN3-236ENST00000640131 RNF214Q8ND24 703 aa14.57□□□□□ -0.08
SPIN3-236ENST00000640131 CNPY2Q9Y2B0 182 aa14.57□□□□□ -0.08
SPIN3-236ENST00000640131 A0A0G2JLW4 131 aa14.56□□□□□ -0.08
SPIN3-236ENST00000640131 ERVV-2B6SEH9 535 aa14.56□□□□□ -0.08
SPIN3-236ENST00000640131 CTIFO43310 598 aaKnown RBP14.56□□□□□ -0.08
SPIN3-236ENST00000640131 NECTIN1Q15223 517 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms