RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	FLAD1	Q8NFF5	587 aa		12.77	□□□□□ -0.37
NECAP1-223	ENST00000640091	AKAP2	Q9Y2D5	859 aa		12.77	□□□□□ -0.37
NECAP1-223	ENST00000640091	MYH3	P11055	1940 aa		12.76	□□□□□ -0.37
NECAP1-223	ENST00000640091	ANKRD18A	Q8IVF6	992 aa		12.76	□□□□□ -0.37
NECAP1-223	ENST00000640091	EDC3	Q96F86	508 aa	Known RBP	12.76	□□□□□ -0.37
NECAP1-223	ENST00000640091	XAGE2	Q96GT9	111 aa		12.76	□□□□□ -0.37
NECAP1-223	ENST00000640091	CDC5L	Q99459	802 aa	Known RBP	12.76	□□□□□ -0.37
NECAP1-223	ENST00000640091	CNTROB	Q8N137	903 aa		12.76	□□□□□ -0.37
NECAP1-223	ENST00000640091	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.76	□□□□□ -0.37
NECAP1-223	ENST00000640091	UPF2	Q9HAU5	1272 aa	Known RBP	12.76	□□□□□ -0.37
NECAP1-223	ENST00000640091	STK32B	Q9NY57	414 aa		12.76	□□□□□ -0.37
NECAP1-223	ENST00000640091	RTL9	Q8NET4	1388 aa		12.75	□□□□□ -0.37
NECAP1-223	ENST00000640091	COL4A1	P02462	1669 aa		12.75	□□□□□ -0.37
NECAP1-223	ENST00000640091	ATP5J	P18859	108 aa		12.75	□□□□□ -0.37
NECAP1-223	ENST00000640091	CHML	P26374	656 aa		12.75	□□□□□ -0.37
NECAP1-223	ENST00000640091	ATP2B3	Q16720	1220 aa		12.75	□□□□□ -0.37
NECAP1-223	ENST00000640091	RIC1	Q4ADV7	1423 aa		12.75	□□□□□ -0.37
NECAP1-223	ENST00000640091	GORAB	Q5T7V8	394 aa		12.75	□□□□□ -0.37
NECAP1-223	ENST00000640091	CASC1	Q6TDU7	716 aa		12.75	□□□□□ -0.37
NECAP1-223	ENST00000640091	MROH5	Q6ZUA9	1318 aa		12.75	□□□□□ -0.37
NECAP1-223	ENST00000640091	WTIP	A6NIX2	430 aa	Predicted RBP	12.74	□□□□□ -0.37
NECAP1-223	ENST00000640091	RPS8	P62241	208 aa	Known RBP	12.74	□□□□□ -0.37
NECAP1-223	ENST00000640091	ST5	P78524	1137 aa		12.74	□□□□□ -0.37
NECAP1-223	ENST00000640091	CHRND	Q07001	517 aa		12.74	□□□□□ -0.37
NECAP1-223	ENST00000640091	DDX46	Q7L014	1031 aa	Known RBP	12.74	□□□□□ -0.37
NECAP1-223	ENST00000640091	DNAJC2	Q99543	621 aa	Known RBP	12.74	□□□□□ -0.37
NECAP1-223	ENST00000640091	ZNF609	O15014	1411 aa		12.74	□□□□□ -0.37
NECAP1-223	ENST00000640091	MMP10	P09238	476 aa		12.74	□□□□□ -0.37
NECAP1-223	ENST00000640091	COL24A1	Q17RW2	1714 aa		12.73	□□□□□ -0.37
NECAP1-223	ENST00000640091	ANP32A	P39687	249 aa	Known RBP	12.73	□□□□□ -0.37
NECAP1-223	ENST00000640091	CCDC158	Q5M9N0	1113 aa		12.73	□□□□□ -0.37
NECAP1-223	ENST00000640091	EVI5L	Q96CN4	794 aa		12.73	□□□□□ -0.37
NECAP1-223	ENST00000640091	C22orf23	Q9BZE7	217 aa		12.73	□□□□□ -0.37
NECAP1-223	ENST00000640091	BSDC1	Q9NW68	430 aa	Predicted RBP	12.73	□□□□□ -0.37
NECAP1-223	ENST00000640091	SLC51A	Q86UW1	340 aa		12.73	□□□□□ -0.37
NECAP1-223	ENST00000640091	IL25	Q9H293	177 aa		12.73	□□□□□ -0.37
NECAP1-223	ENST00000640091	MINPP1	Q9UNW1	487 aa		12.73	□□□□□ -0.37
NECAP1-223	ENST00000640091	TAF1	P21675	1872 aa		12.73	□□□□□ -0.37
NECAP1-223	ENST00000640091	IFIT1	P09914	478 aa	Known RBP	12.72	□□□□□ -0.37
NECAP1-223	ENST00000640091	FGFR2	P21802	821 aa		12.72	□□□□□ -0.37
NECAP1-223	ENST00000640091	PUM3	Q15397	648 aa	Known RBP	12.72	□□□□□ -0.37
NECAP1-223	ENST00000640091	TTC39A	Q5SRH9	613 aa		12.72	□□□□□ -0.37
NECAP1-223	ENST00000640091	CWC27	Q6UX04	472 aa	Known RBP	12.72	□□□□□ -0.37
NECAP1-223	ENST00000640091	LPIN2	Q92539	896 aa		12.72	□□□□□ -0.37
NECAP1-223	ENST00000640091	TBC1D32	Q96NH3	1257 aa		12.72	□□□□□ -0.37
NECAP1-223	ENST00000640091	SNRK	Q9NRH2	765 aa		12.72	□□□□□ -0.37
NECAP1-223	ENST00000640091	GOLGB1	Q14789	3259 aa	Known RBP	12.72	□□□□□ -0.37
NECAP1-223	ENST00000640091	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.71	□□□□□ -0.37
NECAP1-223	ENST00000640091	SCARF1	Q14162	830 aa		12.71	□□□□□ -0.37
NECAP1-223	ENST00000640091	HAUS7	Q99871	368 aa		12.71	□□□□□ -0.37
NECAP1-223	ENST00000640091	ESYT1	Q9BSJ8	1104 aa		12.71	□□□□□ -0.37
NECAP1-223	ENST00000640091	PARP3	Q9Y6F1	533 aa		12.71	□□□□□ -0.37
NECAP1-223	ENST00000640091	GOLIM4	O00461	696 aa		12.71	□□□□□ -0.38
NECAP1-223	ENST00000640091	CHGB	P05060	677 aa		12.71	□□□□□ -0.38
NECAP1-223	ENST00000640091	PI16	Q6UXB8	463 aa		12.71	□□□□□ -0.38
NECAP1-223	ENST00000640091	RPGR	Q92834	1020 aa	Known RBP	12.71	□□□□□ -0.38
NECAP1-223	ENST00000640091	FSD1	Q9BTV5	496 aa		12.71	□□□□□ -0.38
NECAP1-223	ENST00000640091	LAMB2	P55268	1798 aa		12.71	□□□□□ -0.38
NECAP1-223	ENST00000640091	TUBGCP6	Q96RT7	1819 aa		12.71	□□□□□ -0.38
NECAP1-223	ENST00000640091	CCDC102B	Q68D86	513 aa		12.7	□□□□□ -0.38
NECAP1-223	ENST00000640091	ANTXR1	Q9H6X2	564 aa		12.7	□□□□□ -0.38
NECAP1-223	ENST00000640091	RGPD3	A6NKT7	1758 aa	Predicted RBP	12.7	□□□□□ -0.38
NECAP1-223	ENST00000640091	RGPD4	Q7Z3J3	1758 aa		12.7	□□□□□ -0.38
NECAP1-223	ENST00000640091	PHKA1	P46020	1223 aa		12.7	□□□□□ -0.38
NECAP1-223	ENST00000640091	GRAP	Q13588	217 aa		12.7	□□□□□ -0.38
NECAP1-223	ENST00000640091	CRY2	Q49AN0	593 aa		12.7	□□□□□ -0.38
NECAP1-223	ENST00000640091	GRAPL	Q8TC17	118 aa	Predicted RBP	12.7	□□□□□ -0.38
NECAP1-223	ENST00000640091	USP26	Q9BXU7	913 aa		12.7	□□□□□ -0.38
NECAP1-223	ENST00000640091	DIAPH3	Q9NSV4	1193 aa		12.7	□□□□□ -0.38
NECAP1-223	ENST00000640091	PAG1	Q9NWQ8	432 aa		12.7	□□□□□ -0.38
NECAP1-223	ENST00000640091	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.69	□□□□□ -0.38
NECAP1-223	ENST00000640091	SLC5A1	P13866	664 aa		12.69	□□□□□ -0.38
NECAP1-223	ENST00000640091	BCAM	P50895	628 aa		12.69	□□□□□ -0.38
NECAP1-223	ENST00000640091	CCDC125	Q86Z20	511 aa		12.69	□□□□□ -0.38
NECAP1-223	ENST00000640091	MCAM	P43121	646 aa		12.68	□□□□□ -0.38
NECAP1-223	ENST00000640091	ZAP70	P43403	619 aa		12.68	□□□□□ -0.38
NECAP1-223	ENST00000640091	SLFNL1	Q499Z3	407 aa		12.68	□□□□□ -0.38
NECAP1-223	ENST00000640091	FAM227B	Q96M60	508 aa		12.68	□□□□□ -0.38
NECAP1-223	ENST00000640091	BRIP1	Q9BX63	1249 aa		12.68	□□□□□ -0.38
NECAP1-223	ENST00000640091	ANO2	Q9NQ90	1003 aa		12.68	□□□□□ -0.38
NECAP1-223	ENST00000640091	LRP5	O75197	1615 aa		12.68	□□□□□ -0.38
NECAP1-223	ENST00000640091	REC8	O95072	547 aa		12.68	□□□□□ -0.38
NECAP1-223	ENST00000640091	RBM17	Q96I25	401 aa	Known RBP	12.68	□□□□□ -0.38
NECAP1-223	ENST00000640091	KLRG2	A4D1S0	409 aa	Predicted RBP	12.67	□□□□□ -0.38
NECAP1-223	ENST00000640091	GYG1	P46976	350 aa		12.67	□□□□□ -0.38
NECAP1-223	ENST00000640091	NMI	Q13287	307 aa	Predicted RBP	12.67	□□□□□ -0.38
NECAP1-223	ENST00000640091	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.67	□□□□□ -0.38
NECAP1-223	ENST00000640091	SPEF2	Q9C093	1822 aa		12.67	□□□□□ -0.38
NECAP1-223	ENST00000640091	SGSM2	O43147	1006 aa		12.67	□□□□□ -0.38
NECAP1-223	ENST00000640091	KLRK1	P26718	216 aa		12.67	□□□□□ -0.38
NECAP1-223	ENST00000640091	RBM25	P49756	843 aa	Known RBP	12.67	□□□□□ -0.38
NECAP1-223	ENST00000640091	KBTBD3	Q8NAB2	608 aa		12.67	□□□□□ -0.38
NECAP1-223	ENST00000640091	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
NECAP1-223	ENST00000640091	ANKIB1	Q9P2G1	1089 aa		12.67	□□□□□ -0.38
NECAP1-223	ENST00000640091		A0A0D9SFI3	127 aa		12.66	□□□□□ -0.38
NECAP1-223	ENST00000640091	KCNJ4	P48050	445 aa		12.66	□□□□□ -0.38
NECAP1-223	ENST00000640091	UBE4A	Q14139	1066 aa		12.66	□□□□□ -0.38
NECAP1-223	ENST00000640091	IPO9	Q96P70	1041 aa	Known RBP	12.66	□□□□□ -0.38
NECAP1-223	ENST00000640091	CASZ1	Q86V15	1759 aa		12.66	□□□□□ -0.38
NECAP1-223	ENST00000640091	SRGN	P10124	158 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms