RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 MICALL2Q8IY33 904 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 PI4KAP1Q8N8J0 262 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 LINC00116Q8NCU8 138 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 CCDC87Q9NVE4 849 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 ZBTB1Q9Y2K1 713 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 N4BP2Q86UW6 1770 aaPredicted RBP10□□□□□ -0.81
SCARB2-220ENST00000640076 PXDNLA1KZ92 1463 aa10□□□□□ -0.81
SCARB2-220ENST00000640076 C2orf72A6NCS6 295 aa10□□□□□ -0.81
SCARB2-220ENST00000640076 SOWAHDA6NJG2 315 aa10□□□□□ -0.81
SCARB2-220ENST00000640076 KIF3CO14782 793 aa10□□□□□ -0.81
SCARB2-220ENST00000640076 DDX58O95786 925 aaKnown RBP10□□□□□ -0.81
SCARB2-220ENST00000640076 MARSP56192 900 aaKnown RBP10□□□□□ -0.81
SCARB2-220ENST00000640076 KSR2Q6VAB6 950 aa10□□□□□ -0.81
SCARB2-220ENST00000640076 ITPRIPQ8IWB1 547 aa10□□□□□ -0.81
SCARB2-220ENST00000640076 PXYLP1Q8TE99 480 aa10□□□□□ -0.81
SCARB2-220ENST00000640076 CNTNAP4Q9C0A0 1308 aa10□□□□□ -0.81
SCARB2-220ENST00000640076 PLSCR1O15162 318 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 IL6STP40189 918 aaPredicted RBP9.99□□□□□ -0.81
SCARB2-220ENST00000640076 EN1Q05925 392 aaPredicted RBP9.99□□□□□ -0.81
SCARB2-220ENST00000640076 CSPP1Q1MSJ5 1256 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 TMEM164Q5U3C3 297 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 SLC4A10Q6U841 1118 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 NPAS4Q8IUM7 802 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 DNAAF4Q8WXU2 420 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 CCDC136Q96JN2 1154 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 EVI5O60447 810 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 APBA3O96018 575 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 CCT4P50991 539 aaKnown RBP9.99□□□□□ -0.81
SCARB2-220ENST00000640076 RTL5Q5HYW3 569 aaPredicted RBP9.99□□□□□ -0.81
SCARB2-220ENST00000640076 SLC27A3Q5K4L6 730 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 TTLL7Q6ZT98 887 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 PRR7Q8TB68 274 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 LRRC4BQ9NT99 713 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 DDX19BQ9UMR2 479 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 MAP3K2Q9Y2U5 619 aa9.99□□□□□ -0.81
SCARB2-220ENST00000640076 ARFGEF2Q9Y6D5 1785 aa9.98□□□□□ -0.81
SCARB2-220ENST00000640076 EIF5P55010 431 aaKnown RBP9.98□□□□□ -0.81
SCARB2-220ENST00000640076 RC3H1Q5TC82 1133 aaKnown RBP9.98□□□□□ -0.81
SCARB2-220ENST00000640076 GIMAP6Q6P9H5 292 aa9.98□□□□□ -0.81
SCARB2-220ENST00000640076 ANKRD13DQ6ZTN6 518 aa9.98□□□□□ -0.81
SCARB2-220ENST00000640076 PLBD2Q8NHP8 589 aa9.98□□□□□ -0.81
SCARB2-220ENST00000640076 NUP188Q5SRE5 1749 aa9.98□□□□□ -0.81
SCARB2-220ENST00000640076 ATP10DQ9P241 1426 aa9.98□□□□□ -0.81
SCARB2-220ENST00000640076 RGPD3A6NKT7 1758 aaPredicted RBP9.97□□□□□ -0.81
SCARB2-220ENST00000640076 RGPD4Q7Z3J3 1758 aa9.97□□□□□ -0.81
SCARB2-220ENST00000640076 ZMIZ1Q9ULJ6 1067 aa9.97□□□□□ -0.81
SCARB2-220ENST00000640076 C4BP0C0L5 1744 aa9.97□□□□□ -0.81
SCARB2-220ENST00000640076 ANKRD33BA6NCL7 494 aa9.97□□□□□ -0.81
SCARB2-220ENST00000640076 ZBTB7BO15156 539 aaPredicted RBP9.97□□□□□ -0.81
SCARB2-220ENST00000640076 TXNRD1Q16881 649 aa9.97□□□□□ -0.81
SCARB2-220ENST00000640076 BEND3Q5T5X7 828 aa9.97□□□□□ -0.81
SCARB2-220ENST00000640076 KDM4AO75164 1064 aa9.96□□□□□ -0.81
SCARB2-220ENST00000640076 SOX11P35716 441 aa9.96□□□□□ -0.81
SCARB2-220ENST00000640076 AAMPQ13685 434 aa9.96□□□□□ -0.81
SCARB2-220ENST00000640076 KIF6Q6ZMV9 814 aa9.96□□□□□ -0.81
SCARB2-220ENST00000640076 METTL22Q9BUU2 404 aaPredicted RBP9.96□□□□□ -0.81
SCARB2-220ENST00000640076 SRCIN1Q9C0H9 1055 aa9.96□□□□□ -0.81
SCARB2-220ENST00000640076 ZBTB3Q9H5J0 574 aa9.96□□□□□ -0.81
SCARB2-220ENST00000640076 ZBTB40Q9NUA8 1239 aa9.96□□□□□ -0.81
SCARB2-220ENST00000640076 PPP4R2Q9NY27 417 aa9.96□□□□□ -0.81
SCARB2-220ENST00000640076 MAP3K15Q6ZN16 1313 aa9.96□□□□□ -0.82
SCARB2-220ENST00000640076 COL15A1P39059 1388 aa9.96□□□□□ -0.82
SCARB2-220ENST00000640076 RPS6KA4O75676 772 aa9.95□□□□□ -0.82
SCARB2-220ENST00000640076 RECKO95980 971 aa9.95□□□□□ -0.82
SCARB2-220ENST00000640076 SSFA2P28290 1259 aa9.95□□□□□ -0.82
SCARB2-220ENST00000640076 GJA5P36382 358 aa9.95□□□□□ -0.82
SCARB2-220ENST00000640076 TBC1D9Q6ZT07 1266 aa9.95□□□□□ -0.82
SCARB2-220ENST00000640076 LINS1Q8NG48 757 aa9.95□□□□□ -0.82
SCARB2-220ENST00000640076 STK32AQ8WU08 396 aa9.95□□□□□ -0.82
SCARB2-220ENST00000640076 A0A0U1RQG5 324 aaPredicted RBP9.95□□□□□ -0.82
SCARB2-220ENST00000640076 IGKV5-2P06315 115 aa9.95□□□□□ -0.82
SCARB2-220ENST00000640076 NEXNQ0ZGT2 675 aa9.95□□□□□ -0.82
SCARB2-220ENST00000640076 TMED8Q6PL24 325 aaPredicted RBP9.95□□□□□ -0.82
SCARB2-220ENST00000640076 DZIP3Q86Y13 1208 aaKnown RBP9.95□□□□□ -0.82
SCARB2-220ENST00000640076 TRIM34Q9BYJ4 488 aa9.95□□□□□ -0.82
SCARB2-220ENST00000640076 CHMP4BQ9H444 224 aaKnown RBP9.95□□□□□ -0.82
SCARB2-220ENST00000640076 IBTKQ9P2D0 1353 aaPredicted RBP9.94□□□□□ -0.82
SCARB2-220ENST00000640076 ERVV-1B6SEH8 477 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 MAP3K7O43318 606 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 ALDH1L1O75891 902 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 HMGB2P26583 209 aaKnown RBP9.94□□□□□ -0.82
SCARB2-220ENST00000640076 CWF19L2Q2TBE0 894 aaKnown RBP9.94□□□□□ -0.82
SCARB2-220ENST00000640076 CC2D2BQ6DHV5 1058 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 MEIS3Q99687 375 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 MYD88Q99836 296 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 ADGRG1Q9Y653 693 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 UBR3Q6ZT12 1888 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 NUP98P52948 1817 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 NEURL1BA8MQ27 555 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 AMIGO3Q86WK7 504 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 USP44Q9H0E7 712 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 RTCBQ9Y3I0 505 aaKnown RBP9.94□□□□□ -0.82
SCARB2-220ENST00000640076 PCDHB15Q9Y5E8 787 aa9.94□□□□□ -0.82
SCARB2-220ENST00000640076 AFDNP55196 1824 aaKnown RBP9.93□□□□□ -0.82
SCARB2-220ENST00000640076 A0A087WZG4 1122 aa9.93□□□□□ -0.82
SCARB2-220ENST00000640076 MOXD2PA6NHM9 499 aa9.93□□□□□ -0.82
SCARB2-220ENST00000640076 CAMTA2O94983 1202 aa9.93□□□□□ -0.82
SCARB2-220ENST00000640076 HLFQ16534 295 aa9.93□□□□□ -0.82
SCARB2-220ENST00000640076 SMIM5Q71RC9 77 aa9.93□□□□□ -0.82
SCARB2-220ENST00000640076 CAMKK2Q96RR4 588 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms