RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 ZNF446Q9NWS9 450 aa7.08□□□□□ -1.28
NECAP1-222ENST00000640072 KDM2BQ8NHM5 1336 aa7.08□□□□□ -1.28
NECAP1-222ENST00000640072 B3GALNT1O75752 331 aa7.08□□□□□ -1.28
NECAP1-222ENST00000640072 RNASEH2AO75792 299 aaKnown RBP7.08□□□□□ -1.28
NECAP1-222ENST00000640072 NSUN2Q08J23 767 aaKnown RBP eCLIP7.08□□□□□ -1.28
NECAP1-222ENST00000640072 CFAP58Q5T655 872 aa7.08□□□□□ -1.28
NECAP1-222ENST00000640072 PPP4R4Q6NUP7 873 aa7.08□□□□□ -1.28
NECAP1-222ENST00000640072 FILIP1Q7Z7B0 1213 aa7.08□□□□□ -1.28
NECAP1-222ENST00000640072 ZSWIM4Q9H7M6 989 aa7.08□□□□□ -1.28
NECAP1-222ENST00000640072 LZTS1Q9Y250 596 aa7.08□□□□□ -1.28
NECAP1-222ENST00000640072 MRFAP1Q9Y605 127 aa7.08□□□□□ -1.28
NECAP1-222ENST00000640072 ZNF24P17028 368 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 RAB3GAP1Q15042 981 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.07□□□□□ -1.28
NECAP1-222ENST00000640072 ACBD5Q5T8D3 534 aaPredicted RBP7.07□□□□□ -1.28
NECAP1-222ENST00000640072 LRSAM1Q6UWE0 723 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 CCDC186Q7Z3E2 898 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 FAM114A1Q8IWE2 563 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 FBXO18Q8NFZ0 1043 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 RPAP3Q9H6T3 665 aaPredicted RBP7.07□□□□□ -1.28
NECAP1-222ENST00000640072 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.07□□□□□ -1.28
NECAP1-222ENST00000640072 SLC27A2O14975 620 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 FMNL1O95466 1100 aaPredicted RBP7.07□□□□□ -1.28
NECAP1-222ENST00000640072 C16orf45Q96MC5 204 aaPredicted RBP7.07□□□□□ -1.28
NECAP1-222ENST00000640072 PRSS47A8MTI9 375 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 H0Y3Z8 333 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 KIF2AO00139 706 aaPredicted RBP7.07□□□□□ -1.28
NECAP1-222ENST00000640072 GCKP35557 465 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 EIF2B5Q13144 721 aaKnown RBP7.07□□□□□ -1.28
NECAP1-222ENST00000640072 ANKRD45Q5TZF3 282 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 FAM117BQ6P1L5 589 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 ANKRD18AQ8IVF6 992 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 PLPP6Q8IY26 295 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 DCLK2Q8N568 766 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 GOLGA1Q92805 767 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 SCLT1Q96NL6 688 aa7.07□□□□□ -1.28
NECAP1-222ENST00000640072 PRPF40AO75400 957 aaKnown RBP7.06□□□□□ -1.28
NECAP1-222ENST00000640072 BAG4O95429 457 aaKnown RBP7.06□□□□□ -1.28
NECAP1-222ENST00000640072 CCDC159P0C7I6 412 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 MAN1A1P33908 653 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 PRPHP41219 470 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 AMPD3Q01432 767 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 NAA30Q147X3 362 aaPredicted RBP7.06□□□□□ -1.28
NECAP1-222ENST00000640072 OLFML1Q6UWY5 402 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 SEPT14Q6ZU15 432 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 ARMC2Q8NEN0 867 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 STAG1Q8WVM7 1258 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 EIF3CLB5ME19 914 aaKnown RBP7.06□□□□□ -1.28
NECAP1-222ENST00000640072 F8VZ95 297 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 CSPG5O95196 566 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 TRIM21P19474 475 aaKnown RBP7.06□□□□□ -1.28
NECAP1-222ENST00000640072 MATR3P43243 847 aaKnown RBP eCLIP7.06□□□□□ -1.286e-7■■■■□ 26.2
NECAP1-222ENST00000640072 RPS6KA3P51812 740 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 KRT72Q14CN4 511 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 RNF20Q5VTR2 975 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 NEK10Q6ZWH5 1172 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 WDR63Q8IWG1 891 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 HPS3Q969F9 1004 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 MAP3K14Q99558 947 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 EIF3CQ99613 913 aaKnown RBP7.06□□□□□ -1.28
NECAP1-222ENST00000640072 SLX1AQ9BQ83 275 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 TAOK3Q9H2K8 898 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 CLIP2Q9UDT6 1046 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 ZMAT5Q9UDW3 170 aaKnown RBP7.06□□□□□ -1.28
NECAP1-222ENST00000640072 BIVM-ERCC5R4GMW8 1640 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 GOLGA6L19H0YKK7 550 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 ENPP1P22413 925 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 TPD52L1Q16890 204 aaPredicted RBP7.06□□□□□ -1.28
NECAP1-222ENST00000640072 SPECC1Q5M775 1068 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 RBM12BQ8IXT5 1001 aaKnown RBP7.06□□□□□ -1.28
NECAP1-222ENST00000640072 EFCAB13Q8IY85 973 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 PLEKHG4BQ96PX9 1271 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 CAPS2Q9BXY5 557 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 ASAP1Q9ULH1 1129 aa7.06□□□□□ -1.28
NECAP1-222ENST00000640072 NEDD9Q14511 834 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 TMCO3Q6UWJ1 677 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 MIEF2Q96C03 454 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 SPTLC3Q9NUV7 552 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 A0A1B0GUA9 196 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 TMEM110-MUSTN1A8MSY1 372 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 SNX16P57768 344 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 POLR2FP61218 127 aaKnown RBP7.05□□□□□ -1.28
NECAP1-222ENST00000640072 WTAPQ15007 396 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 TBC1D25Q3MII6 688 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 KMT5BQ4FZB7 885 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 ODR4Q5SWX8 454 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 ZNF449Q6P9G9 518 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 NOP9Q86U38 636 aaKnown RBP7.05□□□□□ -1.28
NECAP1-222ENST00000640072 TEX11Q8IYF3 940 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 TMC2Q8TDI7 906 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 MTRQ99707 1265 aa7.05□□□□□ -1.28
NECAP1-222ENST00000640072 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.05□□□□□ -1.28
NECAP1-222ENST00000640072 ZNF330Q9Y3S2 320 aaPredicted RBP7.05□□□□□ -1.28
NECAP1-222ENST00000640072 ADCY5O95622 1261 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 GNAT2P19087 354 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 CYP11B2P19099 503 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 ALDH1B1P30837 517 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 DEUP1Q05D60 604 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 PARP10Q53GL7 1025 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 SFMBT2Q5VUG0 894 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms