RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 AMIGO3Q86WK7 504 aa18.13■□□□□ 0.49
TRIM3-215ENST00000639856 FSD1Q9BTV5 496 aa18.13■□□□□ 0.49
TRIM3-215ENST00000639856 SNRKQ9NRH2 765 aa18.13■□□□□ 0.49
TRIM3-215ENST00000639856 LMBRD1Q9NUN5 540 aa18.13■□□□□ 0.49
TRIM3-215ENST00000639856 CCDC171Q6TFL3 1326 aa18.12■□□□□ 0.49
TRIM3-215ENST00000639856 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
TRIM3-215ENST00000639856 NTSR2O95665 410 aa18.12■□□□□ 0.49
TRIM3-215ENST00000639856 KCNB2Q92953 911 aa18.12■□□□□ 0.49
TRIM3-215ENST00000639856 FAM227BQ96M60 508 aa18.12■□□□□ 0.49
TRIM3-215ENST00000639856 CEP126Q9P2H0 1117 aa18.12■□□□□ 0.49
TRIM3-215ENST00000639856 ANKRD18BA2A2Z9 1011 aa18.11■□□□□ 0.49
TRIM3-215ENST00000639856 GNPATO15228 680 aa18.11■□□□□ 0.49
TRIM3-215ENST00000639856 BRD1O95696 1058 aa18.11■□□□□ 0.49
TRIM3-215ENST00000639856 NMIQ13287 307 aaPredicted RBP18.11■□□□□ 0.49
TRIM3-215ENST00000639856 PARP10Q53GL7 1025 aa18.11■□□□□ 0.49
TRIM3-215ENST00000639856 DNAJC2Q99543 621 aaKnown RBP18.11■□□□□ 0.49
TRIM3-215ENST00000639856 NECTIN1Q15223 517 aa18.11■□□□□ 0.49
TRIM3-215ENST00000639856 FBXO3Q9UK99 471 aa18.11■□□□□ 0.49
TRIM3-215ENST00000639856 ZNF652Q9Y2D9 606 aa18.11■□□□□ 0.49
TRIM3-215ENST00000639856 AK2P54819 239 aa18.1■□□□□ 0.49
TRIM3-215ENST00000639856 LDHAL6AQ6ZMR3 332 aa18.1■□□□□ 0.49
TRIM3-215ENST00000639856 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
TRIM3-215ENST00000639856 GRPEL1Q9HAV7 217 aa18.1■□□□□ 0.49
TRIM3-215ENST00000639856 RIPOR2Q9Y4F9 1068 aa18.1■□□□□ 0.49
TRIM3-215ENST00000639856 LAMB2P55268 1798 aa18.1■□□□□ 0.49
TRIM3-215ENST00000639856 CASTP20810 708 aaKnown RBP18.1■□□□□ 0.49
TRIM3-215ENST00000639856 ADORA1P30542 326 aa18.1■□□□□ 0.49
TRIM3-215ENST00000639856 RC3H1Q5TC82 1133 aaKnown RBP18.1■□□□□ 0.49
TRIM3-215ENST00000639856 PRPF40BQ6NWY9 871 aaKnown RBP18.1■□□□□ 0.49
TRIM3-215ENST00000639856 MAP4K1Q92918 833 aa18.1■□□□□ 0.49
TRIM3-215ENST00000639856 HAUS7Q99871 368 aa18.1■□□□□ 0.49
TRIM3-215ENST00000639856 BCL2L12Q9HB09 334 aa18.1■□□□□ 0.49
TRIM3-215ENST00000639856 SRP68Q9UHB9 627 aaKnown RBP18.1■□□□□ 0.49
TRIM3-215ENST00000639856 LIMCH1Q9UPQ0 1083 aa18.1■□□□□ 0.49
TRIM3-215ENST00000639856 A0A0D9SFI3 127 aa18.09■□□□□ 0.49
TRIM3-215ENST00000639856 RPS6KA4O75676 772 aa18.09■□□□□ 0.49
TRIM3-215ENST00000639856 CHGBP05060 677 aa18.09■□□□□ 0.49
TRIM3-215ENST00000639856 CLEC4GQ6UXB4 293 aa18.09■□□□□ 0.49
TRIM3-215ENST00000639856 LRP5O75197 1615 aa18.09■□□□□ 0.49
TRIM3-215ENST00000639856 USPL1Q5W0Q7 1092 aa18.08■□□□□ 0.49
TRIM3-215ENST00000639856 BICDL1Q6ZP65 573 aa18.08■□□□□ 0.49
TRIM3-215ENST00000639856 DDX46Q7L014 1031 aaKnown RBP18.08■□□□□ 0.49
TRIM3-215ENST00000639856 RUFY3Q7L099 469 aa18.08■□□□□ 0.49
TRIM3-215ENST00000639856 CNNM1Q9NRU3 951 aa18.08■□□□□ 0.49
TRIM3-215ENST00000639856 RBM8AQ9Y5S9 174 aaKnown RBP18.08■□□□□ 0.49
TRIM3-215ENST00000639856 C4BP0C0L5 1744 aa18.08■□□□□ 0.48
TRIM3-215ENST00000639856 PRKCSHP14314 528 aaPredicted RBP18.08■□□□□ 0.48
TRIM3-215ENST00000639856 ZKSCAN1P17029 563 aaPredicted RBP18.08■□□□□ 0.48
TRIM3-215ENST00000639856 ADCK5Q3MIX3 580 aa18.08■□□□□ 0.48
TRIM3-215ENST00000639856 METTL24Q5JXM2 366 aa18.08■□□□□ 0.48
TRIM3-215ENST00000639856 GAS2L3Q86XJ1 694 aa18.08■□□□□ 0.48
TRIM3-215ENST00000639856 PANK2Q9BZ23 570 aa18.08■□□□□ 0.48
TRIM3-215ENST00000639856 BCL11BQ9C0K0 894 aaPredicted RBP18.08■□□□□ 0.48
TRIM3-215ENST00000639856 ZSWIM6Q9HCJ5 1215 aa18.08■□□□□ 0.48
TRIM3-215ENST00000639856 MED23Q9ULK4 1368 aa18.08■□□□□ 0.48
TRIM3-215ENST00000639856 SPEF2Q9C093 1822 aa18.08■□□□□ 0.48
TRIM3-215ENST00000639856 PRPF40AO75400 957 aaKnown RBP18.07■□□□□ 0.48
TRIM3-215ENST00000639856 VPS53Q5VIR6 699 aa18.07■□□□□ 0.48
TRIM3-215ENST00000639856 TBC1D9BQ66K14 1250 aa18.07■□□□□ 0.48
TRIM3-215ENST00000639856 AK7Q96M32 723 aa18.07■□□□□ 0.48
TRIM3-215ENST00000639856 JAKMIP1Q96N16 626 aaKnown RBP18.07■□□□□ 0.48
TRIM3-215ENST00000639856 SEC31BQ9NQW1 1179 aa18.07■□□□□ 0.48
TRIM3-215ENST00000639856 FOXD4L5Q5VV16 416 aaPredicted RBP18.07■□□□□ 0.48
TRIM3-215ENST00000639856 CREB3L3Q68CJ9 461 aa18.07■□□□□ 0.48
TRIM3-215ENST00000639856 FOXD4L4Q8WXT5 416 aaPredicted RBP18.07■□□□□ 0.48
TRIM3-215ENST00000639856 XAGE2Q96GT9 111 aa18.07■□□□□ 0.48
TRIM3-215ENST00000639856 LRRC4BQ9NT99 713 aa18.07■□□□□ 0.48
TRIM3-215ENST00000639856 AKAP2Q9Y2D5 859 aa18.07■□□□□ 0.48
TRIM3-215ENST00000639856 COL4A1P02462 1669 aa18.06■□□□□ 0.48
TRIM3-215ENST00000639856 CASZ1Q86V15 1759 aa18.06■□□□□ 0.48
TRIM3-215ENST00000639856 CPA1P15085 419 aa18.06■□□□□ 0.48
TRIM3-215ENST00000639856 KCNJ4P48050 445 aa18.06■□□□□ 0.48
TRIM3-215ENST00000639856 VGLL2Q8N8G2 317 aa18.06■□□□□ 0.48
TRIM3-215ENST00000639856 NARFQ9UHQ1 456 aa18.06■□□□□ 0.48
TRIM3-215ENST00000639856 RTCBQ9Y3I0 505 aaKnown RBP18.06■□□□□ 0.48
TRIM3-215ENST00000639856 CYP46A1Q9Y6A2 500 aa18.06■□□□□ 0.48
TRIM3-215ENST00000639856 C4AP0C0L4 1744 aa18.06■□□□□ 0.48
TRIM3-215ENST00000639856 GOLIM4O00461 696 aa18.05■□□□□ 0.48
TRIM3-215ENST00000639856 ERFEQ4G0M1 354 aa18.05■□□□□ 0.48
TRIM3-215ENST00000639856 KRT27Q7Z3Y8 459 aa18.05■□□□□ 0.48
TRIM3-215ENST00000639856 RTN4Q9NQC3 1192 aaKnown RBP18.05■□□□□ 0.48
TRIM3-215ENST00000639856 RFX7Q2KHR2 1363 aa18.05■□□□□ 0.48
TRIM3-215ENST00000639856 WDR33Q9C0J8 1336 aaKnown RBP18.05■□□□□ 0.48
TRIM3-215ENST00000639856 PHF14O94880 888 aa18.05■□□□□ 0.48
TRIM3-215ENST00000639856 ATP2B3Q16720 1220 aa18.05■□□□□ 0.48
TRIM3-215ENST00000639856 ZNF589Q86UQ0 364 aaPredicted RBP18.05■□□□□ 0.48
TRIM3-215ENST00000639856 PDRG1Q9NUG6 133 aa18.05■□□□□ 0.48
TRIM3-215ENST00000639856 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.05■□□□□ 0.48
TRIM3-215ENST00000639856 IFIT1P09914 478 aaKnown RBP18.04■□□□□ 0.48
TRIM3-215ENST00000639856 C3orf67Q6ZVT6 689 aa18.04■□□□□ 0.48
TRIM3-215ENST00000639856 ARHGEF1Q92888 912 aaKnown RBP18.04■□□□□ 0.48
TRIM3-215ENST00000639856 CHAMP1Q96JM3 812 aa18.04■□□□□ 0.48
TRIM3-215ENST00000639856 PAG1Q9NWQ8 432 aa18.04■□□□□ 0.48
TRIM3-215ENST00000639856 RPAP1Q9BWH6 1393 aaPredicted RBP18.04■□□□□ 0.48
TRIM3-215ENST00000639856 SLC27A2O14975 620 aa18.04■□□□□ 0.48
TRIM3-215ENST00000639856 NCLP19338 710 aaKnown RBP18.04■□□□□ 0.48
TRIM3-215ENST00000639856 GORABQ5T7V8 394 aa18.04■□□□□ 0.48
TRIM3-215ENST00000639856 RNF20Q5VTR2 975 aa18.04■□□□□ 0.48
TRIM3-215ENST00000639856 CAVIN1Q6NZI2 390 aaKnown RBP18.04■□□□□ 0.48
TRIM3-215ENST00000639856 HELBQ8NG08 1087 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms