RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 CHMP3Q9Y3E7 222 aa13.54□□□□□ -0.24
HNRNPU-221ENST00000639824 PALLDQ8WX93 1383 aa13.53□□□□□ -0.24
HNRNPU-221ENST00000639824 RPAP1Q9BWH6 1393 aaPredicted RBP13.53□□□□□ -0.24
HNRNPU-221ENST00000639824 PKP1Q13835 747 aa13.53□□□□□ -0.24
HNRNPU-221ENST00000639824 FAM43AQ8N2R8 423 aa13.53□□□□□ -0.24
HNRNPU-221ENST00000639824 ANP32BQ92688 251 aaKnown RBP13.53□□□□□ -0.24
HNRNPU-221ENST00000639824 SYAP1Q96A49 352 aaPredicted RBP13.53□□□□□ -0.24
HNRNPU-221ENST00000639824 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
HNRNPU-221ENST00000639824 BTG4Q9NY30 223 aa13.53□□□□□ -0.24
HNRNPU-221ENST00000639824 SMC3Q9UQE7 1217 aa13.53□□□□□ -0.24
HNRNPU-221ENST00000639824 EYA2O00167 538 aa13.52□□□□□ -0.25
HNRNPU-221ENST00000639824 SLC27A2O14975 620 aa13.52□□□□□ -0.25
HNRNPU-221ENST00000639824 PRPF40AO75400 957 aaKnown RBP13.52□□□□□ -0.25
HNRNPU-221ENST00000639824 PCCAP05165 728 aaPredicted RBP13.52□□□□□ -0.25
HNRNPU-221ENST00000639824 CSPP1Q1MSJ5 1256 aa13.52□□□□□ -0.25
HNRNPU-221ENST00000639824 BLOC1S2Q6QNY1 142 aa13.52□□□□□ -0.25
HNRNPU-221ENST00000639824 NOL8Q76FK4 1167 aaKnown RBP13.52□□□□□ -0.25
HNRNPU-221ENST00000639824 FAM227BQ96M60 508 aa13.52□□□□□ -0.25
HNRNPU-221ENST00000639824 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.25
HNRNPU-221ENST00000639824 AKAP2Q9Y2D5 859 aa13.52□□□□□ -0.25
HNRNPU-221ENST00000639824 ANKRD36CQ5JPF3 1778 aa13.52□□□□□ -0.25
HNRNPU-221ENST00000639824 ROBO1Q9Y6N7 1651 aa13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 ZNF609O15014 1411 aa13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 A0A0D9SFI3 127 aa13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 IRX5P78411 483 aaPredicted RBP13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 CCDC57Q2TAC2 916 aa13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 KBTBD3Q8NAB2 608 aa13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 SH3TC1Q8TE82 1336 aa13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
HNRNPU-221ENST00000639824 BCL9O00512 1426 aa13.5□□□□□ -0.25
HNRNPU-221ENST00000639824 PDCP20941 246 aa13.5□□□□□ -0.25
HNRNPU-221ENST00000639824 MCMDC2Q4G0Z9 681 aa13.5□□□□□ -0.25
HNRNPU-221ENST00000639824 ATG9AQ7Z3C6 839 aa13.5□□□□□ -0.25
HNRNPU-221ENST00000639824 DBNDD2Q9BQY9 259 aa13.5□□□□□ -0.25
HNRNPU-221ENST00000639824 OCEL1Q9H607 264 aa13.5□□□□□ -0.25
HNRNPU-221ENST00000639824 HELLSQ9NRZ9 838 aa13.5□□□□□ -0.25
HNRNPU-221ENST00000639824 CEP126Q9P2H0 1117 aa13.5□□□□□ -0.25
HNRNPU-221ENST00000639824 CDHR2Q9BYE9 1310 aa13.5□□□□□ -0.25
HNRNPU-221ENST00000639824 EXOC5O00471 708 aa13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 STX6O43752 255 aa13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 TAF5LO75529 589 aa13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 PHF14O94880 888 aa13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 ZSCAN22P10073 491 aaPredicted RBP13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 ZBTB38Q8NAP3 1195 aaPredicted RBP13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 PIGBQ92521 554 aa13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 JARID2Q92833 1246 aaPredicted RBP13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 RNF25Q96BH1 459 aaPredicted RBP13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 CHMP4CQ96CF2 233 aa13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 TAOK2Q9UL54 1235 aa13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 MAP3K15Q6ZN16 1313 aa13.49□□□□□ -0.25
HNRNPU-221ENST00000639824 HMGB1P09429 215 aaKnown RBP13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 RPS6KB1P23443 525 aa13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 CAVIN1Q6NZI2 390 aaKnown RBP13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 GIGYF2Q6Y7W6 1299 aaKnown RBP13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 DNAJC2Q99543 621 aaKnown RBP13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 SCUBE2Q9NQ36 999 aa13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 PAG1Q9NWQ8 432 aa13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 THRAP3Q9Y2W1 955 aaKnown RBP13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 COL16A1Q07092 1604 aaPredicted RBP13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 ADCK5Q3MIX3 580 aa13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 ZSCAN23Q3MJ62 389 aa13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 DNAJC10Q8IXB1 793 aa13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 NEUROD6Q96NK8 337 aa13.48□□□□□ -0.25
HNRNPU-221ENST00000639824 MYH3P11055 1940 aa13.47□□□□□ -0.25
HNRNPU-221ENST00000639824 ERVV-1B6SEH8 477 aa13.47□□□□□ -0.25
HNRNPU-221ENST00000639824 CSF1RP07333 972 aa13.47□□□□□ -0.25
HNRNPU-221ENST00000639824 ZFYP08048 801 aaPredicted RBP13.47□□□□□ -0.25
HNRNPU-221ENST00000639824 IFIT1P09914 478 aaKnown RBP13.47□□□□□ -0.25
HNRNPU-221ENST00000639824 POTEJP0CG39 1038 aa13.47□□□□□ -0.25
HNRNPU-221ENST00000639824 TAF7LQ5H9L4 462 aa13.47□□□□□ -0.25
HNRNPU-221ENST00000639824 CCDC158Q5M9N0 1113 aa13.47□□□□□ -0.25
HNRNPU-221ENST00000639824 DSCC1Q9BVC3 393 aa13.47□□□□□ -0.25
HNRNPU-221ENST00000639824 ASAP1Q9ULH1 1129 aa13.47□□□□□ -0.25
HNRNPU-221ENST00000639824 A0A1B0GUL7 405 aa13.46□□□□□ -0.25
HNRNPU-221ENST00000639824 LETM1O95202 739 aaPredicted RBP13.46□□□□□ -0.25
HNRNPU-221ENST00000639824 F13A1P00488 732 aa13.46□□□□□ -0.25
HNRNPU-221ENST00000639824 SYT1P21579 422 aa13.46□□□□□ -0.25
HNRNPU-221ENST00000639824 NASPP49321 788 aaPredicted RBP13.46□□□□□ -0.25
HNRNPU-221ENST00000639824 CCDC173Q0VFZ6 552 aa13.46□□□□□ -0.25
HNRNPU-221ENST00000639824 IFIT5Q13325 482 aaKnown RBP13.46□□□□□ -0.25
HNRNPU-221ENST00000639824 GPT2Q8TD30 523 aa13.46□□□□□ -0.25
HNRNPU-221ENST00000639824 AK7Q96M32 723 aa13.46□□□□□ -0.25
HNRNPU-221ENST00000639824 ARXQ96QS3 562 aa13.46□□□□□ -0.25
HNRNPU-221ENST00000639824 CICQ96RK0 1608 aaPredicted RBP13.46□□□□□ -0.26
HNRNPU-221ENST00000639824 GJB2P29033 226 aa13.45□□□□□ -0.26
HNRNPU-221ENST00000639824 IL6STP40189 918 aaPredicted RBP13.45□□□□□ -0.26
HNRNPU-221ENST00000639824 GORABQ5T7V8 394 aa13.45□□□□□ -0.26
HNRNPU-221ENST00000639824 ZNF589Q86UQ0 364 aaPredicted RBP13.45□□□□□ -0.26
HNRNPU-221ENST00000639824 GAS2L3Q86XJ1 694 aa13.45□□□□□ -0.26
HNRNPU-221ENST00000639824 CCDC83Q8IWF9 413 aa13.45□□□□□ -0.26
HNRNPU-221ENST00000639824 NEK1Q96PY6 1258 aa13.45□□□□□ -0.26
HNRNPU-221ENST00000639824 DOT1LQ8TEK3 1739 aa13.44□□□□□ -0.26
HNRNPU-221ENST00000639824 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.44□□□□□ -0.26
HNRNPU-221ENST00000639824 CYP19A1P11511 503 aaPredicted RBP13.44□□□□□ -0.26
HNRNPU-221ENST00000639824 HSP90B1P14625 803 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms