RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 HSP90AB3PQ58FF7 597 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 SYAP1Q96A49 352 aaPredicted RBP10.25□□□□□ -0.77
NECAP1-218ENST00000639595 NEK1Q96PY6 1258 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 RBSNQ9H1K0 784 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 RRAGDQ9NQL2 400 aaPredicted RBP10.25□□□□□ -0.77
NECAP1-218ENST00000639595 EXOC5O00471 708 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 GADD45BO75293 160 aaPredicted RBP10.25□□□□□ -0.77
NECAP1-218ENST00000639595 CYP21A2P08686 494 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 PDCP20941 246 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 NLRP10Q86W26 655 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 NECAB1Q8N987 351 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 FAM89AQ96GI7 184 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 LRP6O75581 1613 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 ERVV-1B6SEH8 477 aa10.24□□□□□ -0.77
NECAP1-218ENST00000639595 IFIT1P09914 478 aaKnown RBP10.24□□□□□ -0.77
NECAP1-218ENST00000639595 CCDC129Q6ZRS4 1044 aa10.24□□□□□ -0.77
NECAP1-218ENST00000639595 COL14A1Q05707 1796 aaKnown RBP10.24□□□□□ -0.77
NECAP1-218ENST00000639595 RNF113AO15541 343 aaKnown RBP10.24□□□□□ -0.77
NECAP1-218ENST00000639595 HMGB1P09429 215 aaKnown RBP10.24□□□□□ -0.77
NECAP1-218ENST00000639595 UBE2HP62256 183 aa10.24□□□□□ -0.77
NECAP1-218ENST00000639595 IFIT5Q13325 482 aaKnown RBP10.24□□□□□ -0.77
NECAP1-218ENST00000639595 HLFQ16534 295 aa10.24□□□□□ -0.77
NECAP1-218ENST00000639595 GDPD2Q9HCC8 539 aa10.24□□□□□ -0.77
NECAP1-218ENST00000639595 SYCE3A1L190 88 aa10.23□□□□□ -0.77
NECAP1-218ENST00000639595 TTLL11Q8NHH1 800 aa10.23□□□□□ -0.77
NECAP1-218ENST00000639595 CDCA7Q9BWT1 371 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-218ENST00000639595 CNPY2Q9Y2B0 182 aa10.23□□□□□ -0.77
NECAP1-218ENST00000639595 RIPOR2Q9Y4F9 1068 aa10.23□□□□□ -0.77
NECAP1-218ENST00000639595 ABCC12Q96J65 1359 aa10.23□□□□□ -0.77
NECAP1-218ENST00000639595 PHF14O94880 888 aa10.23□□□□□ -0.77
NECAP1-218ENST00000639595 IL6STP40189 918 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-218ENST00000639595 CSPP1Q1MSJ5 1256 aa10.23□□□□□ -0.77
NECAP1-218ENST00000639595 LRRFIP1Q32MZ4 808 aaKnown RBP10.23□□□□□ -0.77
NECAP1-218ENST00000639595 CCDC158Q5M9N0 1113 aa10.23□□□□□ -0.77
NECAP1-218ENST00000639595 LARP1BQ659C4 914 aaKnown RBP10.23□□□□□ -0.77
NECAP1-218ENST00000639595 ANP32BQ92688 251 aaKnown RBP10.23□□□□□ -0.77
NECAP1-218ENST00000639595 XAGE2Q96GT9 111 aa10.23□□□□□ -0.77
NECAP1-218ENST00000639595 HSPD1P10809 573 aaKnown RBP10.22□□□□□ -0.77
NECAP1-218ENST00000639595 FOXD4L6Q3SYB3 417 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-218ENST00000639595 FOXD4L3Q6VB84 417 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-218ENST00000639595 PDLIM2Q96JY6 352 aa10.22□□□□□ -0.77
NECAP1-218ENST00000639595 TCEANC2Q96MN5 208 aa10.22□□□□□ -0.77
NECAP1-218ENST00000639595 AGXT2Q9BYV1 514 aa10.22□□□□□ -0.77
NECAP1-218ENST00000639595 ZNF330Q9Y3S2 320 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-218ENST00000639595 AHDC1Q5TGY3 1603 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-218ENST00000639595 ZFYP08048 801 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-218ENST00000639595 CLCN1P35523 988 aa10.22□□□□□ -0.77
NECAP1-218ENST00000639595 EXOSC10Q01780 885 aaKnown RBP10.22□□□□□ -0.77
NECAP1-218ENST00000639595 DHX32Q7L7V1 743 aaKnown RBP10.22□□□□□ -0.77
NECAP1-218ENST00000639595 GTF3C6Q969F1 213 aa10.22□□□□□ -0.77
NECAP1-218ENST00000639595 ZNF512BQ96KM6 892 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-218ENST00000639595 MAST3O60307 1309 aa10.22□□□□□ -0.77
NECAP1-218ENST00000639595 SPEF2Q9C093 1822 aa10.22□□□□□ -0.77
NECAP1-218ENST00000639595 LETM1O95202 739 aaPredicted RBP10.21□□□□□ -0.77
NECAP1-218ENST00000639595 STOX1Q6ZVD7 989 aa10.21□□□□□ -0.77
NECAP1-218ENST00000639595 FBXL16Q8N461 479 aa10.21□□□□□ -0.77
NECAP1-218ENST00000639595 ZBTB1Q9Y2K1 713 aa10.21□□□□□ -0.77
NECAP1-218ENST00000639595 THRAP3Q9Y2W1 955 aaKnown RBP10.21□□□□□ -0.77
NECAP1-218ENST00000639595 CCDC9Q9Y3X0 531 aaKnown RBP10.21□□□□□ -0.77
NECAP1-218ENST00000639595 COL22A1Q8NFW1 1626 aaPredicted RBP10.21□□□□□ -0.77
NECAP1-218ENST00000639595 ESPNB1AK53 854 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 ADORA1P30542 326 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 CTSWP56202 376 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 DNM1Q05193 864 aaKnown RBP10.21□□□□□ -0.78
NECAP1-218ENST00000639595 HS1BP3Q53T59 392 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 Q6ZUG5 572 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 ZNF34Q8IZ26 560 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 SYNE4Q8N205 404 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 TRIM44Q96DX7 344 aaPredicted RBP10.21□□□□□ -0.78
NECAP1-218ENST00000639595 AK7Q96M32 723 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 ITGA6P23229 1130 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 SLFNL1Q499Z3 407 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 TAF7LQ5H9L4 462 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 TTC39AQ5SRH9 613 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 CCDC183Q5T5S1 534 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 VGLL2Q8N8G2 317 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 OSBP2Q969R2 916 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 LLPHQ9BRT6 129 aaKnown RBP10.21□□□□□ -0.78
NECAP1-218ENST00000639595 GREM2Q9H772 168 aa10.21□□□□□ -0.78
NECAP1-218ENST00000639595 ELP1O95163 1332 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 IRS4O14654 1257 aaPredicted RBP10.2□□□□□ -0.78
NECAP1-218ENST00000639595 PFKFB2O60825 505 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 GPTP24298 496 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 GORABQ5T7V8 394 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 LDHAL6AQ6ZMR3 332 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 TSPY26PQ9H489 355 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 PLCH1Q4KWH8 1693 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 ANKRD18BA2A2Z9 1011 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 VPS37CA5D8V6 355 aaPredicted RBP10.2□□□□□ -0.78
NECAP1-218ENST00000639595 PDE8AO60658 829 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 EIF5P55010 431 aaKnown RBP10.2□□□□□ -0.78
NECAP1-218ENST00000639595 FKBP4Q02790 459 aaKnown RBP eCLIP10.2□□□□□ -0.78
NECAP1-218ENST00000639595 ATP2B3Q16720 1220 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 CDC37L1Q7L3B6 337 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 SMARCC2Q8TAQ2 1214 aa10.2□□□□□ -0.78
NECAP1-218ENST00000639595 TRMT112Q9UI30 125 aaKnown RBP10.2□□□□□ -0.78
NECAP1-218ENST00000639595 ITGB4P16144 1822 aa10.19□□□□□ -0.78
NECAP1-218ENST00000639595 COL16A1Q07092 1604 aaPredicted RBP10.19□□□□□ -0.78
NECAP1-218ENST00000639595 RIC1Q4ADV7 1423 aa10.19□□□□□ -0.78
NECAP1-218ENST00000639595 SPATA31A1Q5TZJ5 1347 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms