RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CDC37L1Q7L3B6 337 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 WDR63Q8IWG1 891 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 MIEF2Q96C03 454 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 RUNDC1Q96C34 613 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 PEG3Q9GZU2 1588 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 PRPF40AO75400 957 aaKnown RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 RRM1P23921 792 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 SLC7A5Q01650 507 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 TANGO6Q9C0B7 1094 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 CCDC68Q9H2F9 335 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 ABCC9O60706 1549 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 AKNAQ7Z591 1439 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 RGL1Q9NZL6 768 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 PECAM1P16284 738 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 KIF11P52732 1056 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 BLVRAP53004 296 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 NMIQ13287 307 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 ANKRD45Q5TZF3 282 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 MYSM1Q5VVJ2 828 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 PAWRQ96IZ0 340 aaKnown RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 ALDH8A1Q9H2A2 487 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 VCX3BQ9H321 246 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 PRR12Q9ULL5 1215 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 H0YC42 278 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 DIAPH2O60879 1101 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 VIL1P09327 827 aaKnown RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 TPD52P55327 224 aaPredicted RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 EVA1CP58658 441 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 GNPTABQ3T906 1256 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 ISM2Q6H9L7 571 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 NLRP13Q86W25 1043 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 RNPC3Q96LT9 517 aaKnown RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 TNMDQ9H2S6 317 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 BARX2Q9UMQ3 279 aaPredicted RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 GIGYF1O75420 1035 aaPredicted RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 HNRNPCP07910 306 aaKnown RBP eCLIP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 IL4RP24394 825 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 IQCB1Q15051 598 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 SF3B3Q15393 1217 aaKnown RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 GPCPD1Q9NPB8 672 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 CFDP1Q9UEE9 299 aaPredicted RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 KIF3BO15066 747 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 TRAPPC10P48553 1259 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 TUBA3CQ13748 450 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 B4GALNT2Q8NHY0 566 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 XPO4Q9C0E2 1151 aaKnown RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 PRIM1P49642 420 aaKnown RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 PARP9Q8IXQ6 854 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 DDX27Q96GQ7 796 aaKnown RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 DHRS1Q96LJ7 313 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 QPCTLQ9NXS2 382 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 DMRT2Q9Y5R5 561 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 FGFR1OPO95684 399 aaKnown RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 TROVE2P10155 538 aaKnown RBP eCLIP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 COX10Q12887 443 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 PREPLQ4J6C6 727 aaPredicted RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 CCDC122Q5T0U0 273 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 ITPRIPQ8IWB1 547 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 SPACA7Q96KW9 195 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 RBSNQ9H1K0 784 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 SLKQ9H2G2 1235 aaPredicted RBP4.93□□□□□ -1.62
SCN3A-209ENST00000639244 MAPK8IP3Q9UPT6 1336 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 FYB1O15117 783 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 ATXN8OSP0DMR3 200 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 ARPC4P59998 168 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 RCSD1Q6JBY9 416 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 NEK10Q6ZWH5 1172 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 SLC26A4O43511 780 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 GNAT2P19087 354 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 POSTNQ15063 836 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 CNGA3Q16281 694 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 RSPH3Q86UC2 560 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 AS3MTQ9HBK9 375 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 TMEM165Q9HC07 324 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 ZNF304Q9HCX3 659 aa4.93□□□□□ -1.62
SCN3A-209ENST00000639244 VAMP4O75379 141 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 KRT18P05783 430 aaKnown RBP4.92□□□□□ -1.62
SCN3A-209ENST00000639244 IDEP14735 1019 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 CYP2C19P33261 490 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 RAPGEF1Q13905 1077 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 CCDC93Q567U6 631 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 SPC24Q8NBT2 197 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 ZFPM2Q8WW38 1151 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 TATDN2Q93075 761 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 MKRN1Q9UHC7 482 aaKnown RBP4.92□□□□□ -1.62
SCN3A-209ENST00000639244 POLG2Q9UHN1 485 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 DDX41Q9UJV9 622 aaKnown RBP4.92□□□□□ -1.62
SCN3A-209ENST00000639244 SATB2Q9UPW6 733 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 USTQ9Y2C2 406 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 EZRP15311 586 aaKnown RBP4.92□□□□□ -1.62
SCN3A-209ENST00000639244 MAP7Q14244 749 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 AGAP9Q5VTM2 703 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 EFCAB2Q5VUJ9 269 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 SYT10Q6XYQ8 523 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 CCDC150Q8NCX0 1101 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 SAAL1Q96ER3 474 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 YIPF2Q9BWQ6 316 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 OSBPL10Q9BXB5 764 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 CGNL1Q0VF96 1302 aa4.92□□□□□ -1.62
SCN3A-209ENST00000639244 B3GALNT1O75752 331 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms