RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 LRP8Q14114 963 aa7.71□□□□□ -1.18
CCDC7-211ENST00000638889 IL22RA1Q8N6P7 574 aa7.71□□□□□ -1.18
CCDC7-211ENST00000638889 MRPL18Q9H0U6 180 aaKnown RBP7.71□□□□□ -1.18
CCDC7-211ENST00000638889 MUC3BQ9H195 1237 aa7.71□□□□□ -1.18
CCDC7-211ENST00000638889 SLC51AQ86UW1 340 aa7.7□□□□□ -1.18
CCDC7-211ENST00000638889 STK32AQ8WU08 396 aa7.7□□□□□ -1.18
CCDC7-211ENST00000638889 MEGF10Q96KG7 1140 aa7.7□□□□□ -1.18
CCDC7-211ENST00000638889 NSUN5Q96P11 429 aaKnown RBP7.7□□□□□ -1.18
CCDC7-211ENST00000638889 FNDC3AQ9Y2H6 1198 aaKnown RBP7.7□□□□□ -1.18
CCDC7-211ENST00000638889 UBAP1LF5GYI3 381 aa7.69□□□□□ -1.18
CCDC7-211ENST00000638889 TRIP4Q15650 581 aaPredicted RBP7.69□□□□□ -1.18
CCDC7-211ENST00000638889 GDF6Q6KF10 455 aaPredicted RBP7.69□□□□□ -1.18
CCDC7-211ENST00000638889 DZIP1LQ8IYY4 767 aaKnown RBP7.69□□□□□ -1.18
CCDC7-211ENST00000638889 OR13H1Q8NG92 308 aa7.69□□□□□ -1.18
CCDC7-211ENST00000638889 PSMG3-AS1Q96PY0 264 aa7.69□□□□□ -1.18
CCDC7-211ENST00000638889 AKTIPQ9H8T0 292 aa7.69□□□□□ -1.18
CCDC7-211ENST00000638889 TNFRSF10BO14763 440 aa7.68□□□□□ -1.18
CCDC7-211ENST00000638889 NBPF11Q86T75 865 aa7.68□□□□□ -1.18
CCDC7-211ENST00000638889 CLP1Q92989 425 aaKnown RBP7.68□□□□□ -1.18
CCDC7-211ENST00000638889 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.67□□□□□ -1.18
CCDC7-211ENST00000638889 SETDB1Q15047 1291 aa7.67□□□□□ -1.18
CCDC7-211ENST00000638889 FAM26DQ5JW98 314 aa7.67□□□□□ -1.18
CCDC7-211ENST00000638889 PRR23CQ6ZRP0 262 aa7.67□□□□□ -1.18
CCDC7-211ENST00000638889 SPACA7Q96KW9 195 aa7.67□□□□□ -1.18
CCDC7-211ENST00000638889 STIM2Q9P246 746 aa7.67□□□□□ -1.18
CCDC7-211ENST00000638889 F8W735 103 aaPredicted RBP7.66□□□□□ -1.18
CCDC7-211ENST00000638889 ZAP70P43403 619 aa7.66□□□□□ -1.18
CCDC7-211ENST00000638889 HYAL2Q12891 473 aa7.66□□□□□ -1.18
CCDC7-211ENST00000638889 TMEM164Q5U3C3 297 aa7.66□□□□□ -1.18
CCDC7-211ENST00000638889 ABTB2Q8N961 1025 aa7.66□□□□□ -1.18
CCDC7-211ENST00000638889 RNF112Q9ULX5 631 aa7.66□□□□□ -1.18
CCDC7-211ENST00000638889 TRIM33Q9UPN9 1127 aa7.66□□□□□ -1.18
CCDC7-211ENST00000638889 PPME1Q9Y570 386 aa7.66□□□□□ -1.18
CCDC7-211ENST00000638889 HYAL3O43820 417 aaPredicted RBP7.65□□□□□ -1.18
CCDC7-211ENST00000638889 NAA30Q147X3 362 aaPredicted RBP7.65□□□□□ -1.18
CCDC7-211ENST00000638889 TTC39BQ5VTQ0 682 aaPredicted RBP7.65□□□□□ -1.18
CCDC7-211ENST00000638889 Q6ZS46 218 aa7.65□□□□□ -1.18
CCDC7-211ENST00000638889 CAPN12Q6ZSI9 719 aa7.65□□□□□ -1.18
CCDC7-211ENST00000638889 MKNK1Q9BUB5 465 aa7.65□□□□□ -1.18
CCDC7-211ENST00000638889 KIF4AO95239 1232 aa7.64□□□□□ -1.19
CCDC7-211ENST00000638889 ABI2Q9NYB9 513 aaPredicted RBP7.64□□□□□ -1.19
CCDC7-211ENST00000638889 SMNDC1O75940 238 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCDC7-211ENST00000638889 GPR152Q8TDT2 470 aa7.63□□□□□ -1.19
CCDC7-211ENST00000638889 PBXIP1Q96AQ6 731 aa7.63□□□□□ -1.19
CCDC7-211ENST00000638889 ALX3O95076 343 aa7.62□□□□□ -1.19
CCDC7-211ENST00000638889 SCNN1AP37088 669 aa7.62□□□□□ -1.19
CCDC7-211ENST00000638889 COL13A1Q5TAT6 717 aaPredicted RBP7.62□□□□□ -1.19
CCDC7-211ENST00000638889 PDE12Q6L8Q7 609 aaKnown RBP7.62□□□□□ -1.19
CCDC7-211ENST00000638889 RPLP1P05386 114 aaKnown RBP7.61□□□□□ -1.19
CCDC7-211ENST00000638889 CDC27P30260 824 aa7.61□□□□□ -1.19
CCDC7-211ENST00000638889 CEP135Q66GS9 1140 aa7.61□□□□□ -1.19
CCDC7-211ENST00000638889 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.61□□□□□ -1.19
CCDC7-211ENST00000638889 ZMYND15Q9H091 742 aa7.61□□□□□ -1.19
CCDC7-211ENST00000638889 LINC01387J3KSC0 135 aa7.6□□□□□ -1.19
CCDC7-211ENST00000638889 ZBTB39O15060 712 aa7.6□□□□□ -1.19
CCDC7-211ENST00000638889 GLB1P16278 677 aa7.6□□□□□ -1.19
CCDC7-211ENST00000638889 FSTP19883 344 aa7.6□□□□□ -1.19
CCDC7-211ENST00000638889 ATP11AP98196 1134 aa7.6□□□□□ -1.19
CCDC7-211ENST00000638889 SERPINA10Q9UK55 444 aa7.6□□□□□ -1.19
CCDC7-211ENST00000638889 GSC2O15499 205 aa7.59□□□□□ -1.19
CCDC7-211ENST00000638889 ATP2B4P23634 1241 aa7.59□□□□□ -1.19
CCDC7-211ENST00000638889 CD68P34810 354 aaPredicted RBP7.59□□□□□ -1.19
CCDC7-211ENST00000638889 FAM117BQ6P1L5 589 aa7.59□□□□□ -1.19
CCDC7-211ENST00000638889 KLHL23Q8NBE8 558 aa7.59□□□□□ -1.19
CCDC7-211ENST00000638889 GALNT11Q8NCW6 608 aa7.59□□□□□ -1.19
CCDC7-211ENST00000638889 CCDC97Q96F63 343 aaPredicted RBP7.59□□□□□ -1.19
CCDC7-211ENST00000638889 PBX4Q9BYU1 374 aa7.59□□□□□ -1.19
CCDC7-211ENST00000638889 LACRTQ9GZZ8 138 aa7.59□□□□□ -1.19
CCDC7-211ENST00000638889 RASSF4Q9H2L5 321 aa7.59□□□□□ -1.19
CCDC7-211ENST00000638889 FAM177BA6PVY3 158 aa7.58□□□□□ -1.2
CCDC7-211ENST00000638889 XKR5Q6UX68 686 aa7.58□□□□□ -1.2
CCDC7-211ENST00000638889 AGGF1Q8N302 714 aaeCLIP7.58□□□□□ -1.2
CCDC7-211ENST00000638889 CEP120Q8N960 986 aa7.58□□□□□ -1.2
CCDC7-211ENST00000638889 CEP41Q9BYV8 373 aa7.58□□□□□ -1.2
CCDC7-211ENST00000638889 ADAM19Q9H013 955 aa7.58□□□□□ -1.2
CCDC7-211ENST00000638889 ELP3Q9H9T3 547 aa7.58□□□□□ -1.2
CCDC7-211ENST00000638889 SLAIN2Q9P270 581 aa7.58□□□□□ -1.2
CCDC7-211ENST00000638889 RAXQ9Y2V3 346 aa7.58□□□□□ -1.2
CCDC7-211ENST00000638889 TM4SF5O14894 197 aa7.57□□□□□ -1.2
CCDC7-211ENST00000638889 PTPRAP18433 802 aa7.57□□□□□ -1.2
CCDC7-211ENST00000638889 NCAPG2Q86XI2 1143 aa7.57□□□□□ -1.2
CCDC7-211ENST00000638889 WNT8BQ93098 351 aa7.57□□□□□ -1.2
CCDC7-211ENST00000638889 NUDT16Q96DE0 195 aaKnown RBP7.57□□□□□ -1.2
CCDC7-211ENST00000638889 UBL7Q96S82 380 aaPredicted RBP7.57□□□□□ -1.2
CCDC7-211ENST00000638889 KRTAP9-2Q9BYQ4 174 aa7.57□□□□□ -1.2
CCDC7-211ENST00000638889 FSCN2O14926 492 aa7.56□□□□□ -1.2
CCDC7-211ENST00000638889 DHX15O43143 795 aaKnown RBP7.56□□□□□ -1.2
CCDC7-211ENST00000638889 CYP2E1P05181 493 aaPredicted RBP7.56□□□□□ -1.2
CCDC7-211ENST00000638889 PCSK2P16519 638 aa7.56□□□□□ -1.2
CCDC7-211ENST00000638889 UVSSAQ2YD98 709 aa7.56□□□□□ -1.2
CCDC7-211ENST00000638889 ZNF438Q7Z4V0 828 aa7.56□□□□□ -1.2
CCDC7-211ENST00000638889 HELQQ8TDG4 1101 aa7.56□□□□□ -1.2
CCDC7-211ENST00000638889 SEPT3Q9UH03 358 aa7.56□□□□□ -1.2
CCDC7-211ENST00000638889 TXNDC11Q6PKC3 985 aa7.55□□□□□ -1.2
CCDC7-211ENST00000638889 ACAD11Q709F0 780 aa7.55□□□□□ -1.2
CCDC7-211ENST00000638889 POP1Q99575 1024 aaKnown RBP7.55□□□□□ -1.2
CCDC7-211ENST00000638889 SEC31BQ9NQW1 1179 aa7.55□□□□□ -1.2
CCDC7-211ENST00000638889 TMEM63CQ9P1W3 806 aa7.55□□□□□ -1.2
CCDC7-211ENST00000638889 SALL4Q9UJQ4 1053 aa7.55□□□□□ -1.2
CCDC7-211ENST00000638889 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms