RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 SURF6O75683 361 aaKnown RBP14.18□□□□□ -0.14
GFAP-228ENST00000638488 IVLP07476 585 aa14.18□□□□□ -0.14
GFAP-228ENST00000638488 TPM1P09493 284 aa14.18□□□□□ -0.14
GFAP-228ENST00000638488 TATP17735 454 aaPredicted RBP14.18□□□□□ -0.14
GFAP-228ENST00000638488 ARHGAP29Q52LW3 1261 aa14.18□□□□□ -0.14
GFAP-228ENST00000638488 CADPS2Q86UW7 1296 aa14.18□□□□□ -0.14
GFAP-228ENST00000638488 DBF4Q9UBU7 674 aaPredicted RBP14.18□□□□□ -0.14
GFAP-228ENST00000638488 KIF1AQ12756 1690 aa14.18□□□□□ -0.14
GFAP-228ENST00000638488 LMO7Q8WWI1 1683 aa14.18□□□□□ -0.14
GFAP-228ENST00000638488 PHRF1Q9P1Y6 1649 aaKnown RBP14.18□□□□□ -0.14
GFAP-228ENST00000638488 MYCNP04198 464 aaPredicted RBP14.18□□□□□ -0.14
GFAP-228ENST00000638488 ATP2B1P20020 1258 aa14.18□□□□□ -0.14
GFAP-228ENST00000638488 BEND3Q5T5X7 828 aa14.18□□□□□ -0.14
GFAP-228ENST00000638488 MAP3K2Q9Y2U5 619 aa14.18□□□□□ -0.14
GFAP-228ENST00000638488 CEP83Q9Y592 693 aa14.18□□□□□ -0.14
GFAP-228ENST00000638488 NPHP3Q7Z494 1330 aa14.18□□□□□ -0.14
GFAP-228ENST00000638488 HOXB7P09629 217 aa14.17□□□□□ -0.14
GFAP-228ENST00000638488 CCZ1BP86790 482 aa14.17□□□□□ -0.14
GFAP-228ENST00000638488 CCZ1P86791 482 aaPredicted RBP14.17□□□□□ -0.14
GFAP-228ENST00000638488 NUTM1Q86Y26 1132 aa14.17□□□□□ -0.14
GFAP-228ENST00000638488 DDX19AQ9NUU7 478 aaKnown RBP14.17□□□□□ -0.14
GFAP-228ENST00000638488 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.17□□□□□ -0.14
GFAP-228ENST00000638488 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
GFAP-228ENST00000638488 KDM3BQ7LBC6 1761 aa14.17□□□□□ -0.14
GFAP-228ENST00000638488 CCDC172P0C7W6 258 aa14.17□□□□□ -0.14
GFAP-228ENST00000638488 DNM1Q05193 864 aaKnown RBP14.17□□□□□ -0.14
GFAP-228ENST00000638488 UPF3BQ9BZI7 483 aaKnown RBP14.17□□□□□ -0.14
GFAP-228ENST00000638488 TNMDQ9H2S6 317 aa14.17□□□□□ -0.14
GFAP-228ENST00000638488 MAP4K4O95819 1239 aaPredicted RBP14.16□□□□□ -0.14
GFAP-228ENST00000638488 MYL6BP14649 208 aa14.16□□□□□ -0.14
GFAP-228ENST00000638488 OAS2P29728 719 aaKnown RBP14.16□□□□□ -0.14
GFAP-228ENST00000638488 CWF19L2Q2TBE0 894 aaKnown RBP14.16□□□□□ -0.14
GFAP-228ENST00000638488 DEF6Q9H4E7 631 aa14.16□□□□□ -0.14
GFAP-228ENST00000638488 ANO2Q9NQ90 1003 aa14.16□□□□□ -0.14
GFAP-228ENST00000638488 ORC3Q9UBD5 711 aaPredicted RBP14.16□□□□□ -0.14
GFAP-228ENST00000638488 SMC3Q9UQE7 1217 aa14.16□□□□□ -0.14
GFAP-228ENST00000638488 CACNA1FO60840 1977 aa14.16□□□□□ -0.14
GFAP-228ENST00000638488 ADCY9O60503 1353 aa14.16□□□□□ -0.14
GFAP-228ENST00000638488 SNW1Q13573 536 aaKnown RBP14.16□□□□□ -0.14
GFAP-228ENST00000638488 SUGP1Q8IWZ8 645 aaKnown RBP14.16□□□□□ -0.14
GFAP-228ENST00000638488 C9orf78Q9NZ63 289 aaPredicted RBP14.16□□□□□ -0.14
GFAP-228ENST00000638488 ACTN2P35609 894 aa14.15□□□□□ -0.14
GFAP-228ENST00000638488 PIP4K2AP48426 406 aaPredicted RBP14.15□□□□□ -0.14
GFAP-228ENST00000638488 ZNF165P49910 485 aa14.15□□□□□ -0.14
GFAP-228ENST00000638488 TPRNQ4KMQ1 711 aa14.15□□□□□ -0.14
GFAP-228ENST00000638488 SWT1Q5T5J6 900 aaKnown RBP14.15□□□□□ -0.14
GFAP-228ENST00000638488 SRRTQ9BXP5 876 aaKnown RBP14.15□□□□□ -0.14
GFAP-228ENST00000638488 PXDNLA1KZ92 1463 aa14.15□□□□□ -0.14
GFAP-228ENST00000638488 CCDC69A6NI79 296 aa14.15□□□□□ -0.14
GFAP-228ENST00000638488 CASTP20810 708 aaKnown RBP14.15□□□□□ -0.14
GFAP-228ENST00000638488 KCNJ6P48051 423 aa14.15□□□□□ -0.14
GFAP-228ENST00000638488 OS9Q13438 667 aaPredicted RBP14.15□□□□□ -0.14
GFAP-228ENST00000638488 TSGA10IPQ3SY00 556 aa14.15□□□□□ -0.14
GFAP-228ENST00000638488 CCDC91Q7Z6B0 441 aa14.15□□□□□ -0.14
GFAP-228ENST00000638488 MTMR6Q9Y217 621 aa14.15□□□□□ -0.14
GFAP-228ENST00000638488 NCAPD2Q15021 1401 aa14.15□□□□□ -0.14
GFAP-228ENST00000638488 ALS2Q96Q42 1657 aa14.15□□□□□ -0.14
GFAP-228ENST00000638488 NPHP1O15259 732 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 HSPA4P34932 840 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 GSDMDP57764 484 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 REXO1L1PQ8IX06 675 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 UBXN4Q92575 508 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 SPG7Q9UQ90 795 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 RPS6KA5O75582 802 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 PHKG2P15735 406 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 CHMLP26374 656 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 SMC1AQ14683 1233 aaKnown RBP14.14□□□□□ -0.15
GFAP-228ENST00000638488 CT47A1Q5JQC4 288 aaPredicted RBP14.14□□□□□ -0.15
GFAP-228ENST00000638488 CCDC158Q5M9N0 1113 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 ZNF790Q6PG37 636 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 BANK1Q8NDB2 785 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 SSH3Q8TE77 659 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 TTC14Q96N46 770 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 CLSTN2Q9H4D0 955 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 LIMCH1Q9UPQ0 1083 aa14.14□□□□□ -0.15
GFAP-228ENST00000638488 PSDA5PKW4 1024 aaPredicted RBP14.13□□□□□ -0.15
GFAP-228ENST00000638488 KRT85P78386 507 aa14.13□□□□□ -0.15
GFAP-228ENST00000638488 PACS2Q86VP3 889 aa14.13□□□□□ -0.15
GFAP-228ENST00000638488 PPM1EQ8WY54 764 aa14.13□□□□□ -0.15
GFAP-228ENST00000638488 MEGF6O75095 1541 aa14.13□□□□□ -0.15
GFAP-228ENST00000638488 KIF1CO43896 1103 aaKnown RBP14.13□□□□□ -0.15
GFAP-228ENST00000638488 UNC5CLQ8IV45 518 aa14.13□□□□□ -0.15
GFAP-228ENST00000638488 SLC52A2Q9HAB3 445 aa14.13□□□□□ -0.15
GFAP-228ENST00000638488 DONSONQ9NYP3 566 aa14.13□□□□□ -0.15
GFAP-228ENST00000638488 TBC1D8O95759 1140 aa14.12□□□□□ -0.15
GFAP-228ENST00000638488 LIG1P18858 919 aa14.12□□□□□ -0.15
GFAP-228ENST00000638488 GSCP56915 257 aaPredicted RBP14.12□□□□□ -0.15
GFAP-228ENST00000638488 LEKR1Q6ZMV7 388 aa14.12□□□□□ -0.15
GFAP-228ENST00000638488 RHPN1Q8TCX5 695 aa14.12□□□□□ -0.15
GFAP-228ENST00000638488 TRMT1Q9NXH9 659 aaKnown RBP14.12□□□□□ -0.15
GFAP-228ENST00000638488 SALL3Q9BXA9 1300 aa14.12□□□□□ -0.15
GFAP-228ENST00000638488 TNS3Q68CZ2 1445 aa14.12□□□□□ -0.15
GFAP-228ENST00000638488 DHX8Q14562 1220 aaKnown RBP14.12□□□□□ -0.15
GFAP-228ENST00000638488 KSR2Q6VAB6 950 aa14.12□□□□□ -0.15
GFAP-228ENST00000638488 IFNL2Q8IZJ0 200 aa14.12□□□□□ -0.15
GFAP-228ENST00000638488 DRC1Q96MC2 740 aa14.12□□□□□ -0.15
GFAP-228ENST00000638488 SPATA31A3Q5VYP0 1347 aa14.12□□□□□ -0.15
GFAP-228ENST00000638488 PHLPP2Q6ZVD8 1323 aa14.12□□□□□ -0.15
GFAP-228ENST00000638488 GOLGA6L19H0YKK7 550 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 CPP00450 1065 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms