RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 WNK3Q9BYP7 1800 aa8.56□□□□□ -1.04
SCARB2-206ENST00000638175 COL18A1P39060 1754 aa8.56□□□□□ -1.04
SCARB2-206ENST00000638175 NFAT5O94916 1531 aa8.55□□□□□ -1.04
SCARB2-206ENST00000638175 MAN1A2O60476 641 aa8.55□□□□□ -1.04
SCARB2-206ENST00000638175 BMP2P12643 396 aa8.55□□□□□ -1.04
SCARB2-206ENST00000638175 LINC00528Q8N1L1 170 aa8.55□□□□□ -1.04
SCARB2-206ENST00000638175 SLC12A5Q9H2X9 1139 aa8.55□□□□□ -1.04
SCARB2-206ENST00000638175 USP19O94966 1318 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 TTC21BQ7Z4L5 1316 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 OVOS2A0A0J9YW53 1432 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 OVOS2Q6IE36 1432 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP31Q70CQ4 1352 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 CCDC7Q96M83 1385 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L15C9J2P7 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L10C9JJH3 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L13C9JLJ4 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L12C9JPN9 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L11C9JVI0 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L21D6R901 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L18D6R9N7 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L22D6RA61 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L17D6RBQ6 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L19D6RCP7 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L20D6RJB6 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 PDE4CQ08493 712 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 USP17L24Q0WX57 530 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 CCDC116Q8IYX3 515 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 ABTB2Q8N961 1025 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 NOD1Q9Y239 953 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 KIF7Q2M1P5 1343 aa8.54□□□□□ -1.04
SCARB2-206ENST00000638175 PDIA4P13667 645 aaKnown RBP8.53□□□□□ -1.04
SCARB2-206ENST00000638175 PTK7Q13308 1070 aa8.53□□□□□ -1.04
SCARB2-206ENST00000638175 NLRP13Q86W25 1043 aa8.53□□□□□ -1.04
SCARB2-206ENST00000638175 TRIM50Q86XT4 487 aa8.53□□□□□ -1.04
SCARB2-206ENST00000638175 ZSCAN1Q8NBB4 408 aa8.53□□□□□ -1.04
SCARB2-206ENST00000638175 CDCA7Q9BWT1 371 aaPredicted RBP8.53□□□□□ -1.04
SCARB2-206ENST00000638175 ZMIZ1Q9ULJ6 1067 aa8.53□□□□□ -1.04
SCARB2-206ENST00000638175 PCDHB11Q9Y5F2 797 aa8.53□□□□□ -1.04
SCARB2-206ENST00000638175 SLIT2O94813 1529 aa8.53□□□□□ -1.04
SCARB2-206ENST00000638175 NSD3Q9BZ95 1437 aa8.53□□□□□ -1.04
SCARB2-206ENST00000638175 CPDO75976 1380 aa8.52□□□□□ -1.05
SCARB2-206ENST00000638175 TMEM88BA6NKF7 163 aa8.52□□□□□ -1.05
SCARB2-206ENST00000638175 UPP2O95045 317 aa8.52□□□□□ -1.05
SCARB2-206ENST00000638175 CSB-PGBD3P0DP91 1061 aa8.52□□□□□ -1.05
SCARB2-206ENST00000638175 VSIG8P0DPA2 414 aa8.52□□□□□ -1.05
SCARB2-206ENST00000638175 CRTC2Q53ET0 693 aaPredicted RBP8.52□□□□□ -1.05
SCARB2-206ENST00000638175 MEX3CQ5U5Q3 659 aaKnown RBP8.52□□□□□ -1.05
SCARB2-206ENST00000638175 DNMT3LQ9UJW3 386 aa8.52□□□□□ -1.05
SCARB2-206ENST00000638175 EMILIN1Q9Y6C2 1016 aa8.52□□□□□ -1.05
SCARB2-206ENST00000638175 NSD2O96028 1365 aa8.51□□□□□ -1.05
SCARB2-206ENST00000638175 ERVH48-1M5A8F1 160 aa8.51□□□□□ -1.05
SCARB2-206ENST00000638175 DKK1O94907 266 aa8.51□□□□□ -1.05
SCARB2-206ENST00000638175 ATP1A2P50993 1020 aa8.51□□□□□ -1.05
SCARB2-206ENST00000638175 ERVK-9P63128 1117 aa8.51□□□□□ -1.05
SCARB2-206ENST00000638175 DHX9Q08211 1270 aaKnown RBP8.51□□□□□ -1.05
SCARB2-206ENST00000638175 CBLBQ13191 982 aa8.51□□□□□ -1.05
SCARB2-206ENST00000638175 OXLD1Q5BKU9 147 aa8.51□□□□□ -1.05
SCARB2-206ENST00000638175 PPP1R26Q5T8A7 1209 aaPredicted RBP8.51□□□□□ -1.05
SCARB2-206ENST00000638175 SIX5Q8N196 739 aa8.51□□□□□ -1.05
SCARB2-206ENST00000638175 KCNH5Q8NCM2 988 aa8.51□□□□□ -1.05
SCARB2-206ENST00000638175 POLR3GLQ9BT43 218 aa8.51□□□□□ -1.05
SCARB2-206ENST00000638175 WASHC2AQ641Q2 1341 aa8.51□□□□□ -1.05
SCARB2-206ENST00000638175 PPFIA3O75145 1194 aa8.5□□□□□ -1.05
SCARB2-206ENST00000638175 CLDN10P78369 228 aa8.5□□□□□ -1.05
SCARB2-206ENST00000638175 USP4Q13107 963 aa8.5□□□□□ -1.05
SCARB2-206ENST00000638175 LARGE2Q8N3Y3 721 aa8.5□□□□□ -1.05
SCARB2-206ENST00000638175 TSEN34Q9BSV6 310 aaKnown RBP8.5□□□□□ -1.05
SCARB2-206ENST00000638175 NOVA2Q9UNW9 492 aaKnown RBP8.5□□□□□ -1.05
SCARB2-206ENST00000638175 PCDHGA11Q9Y5H2 935 aa8.5□□□□□ -1.05
SCARB2-206ENST00000638175 CGNL1Q0VF96 1302 aa8.5□□□□□ -1.05
SCARB2-206ENST00000638175 RGPD2P0DJD1 1756 aa8.49□□□□□ -1.05
SCARB2-206ENST00000638175 ZBTB7BO15156 539 aaPredicted RBP8.49□□□□□ -1.05
SCARB2-206ENST00000638175 ADAMTS2O95450 1211 aa8.49□□□□□ -1.05
SCARB2-206ENST00000638175 RASA1P20936 1047 aa8.49□□□□□ -1.05
SCARB2-206ENST00000638175 GTF2IP78347 998 aa8.49□□□□□ -1.05
SCARB2-206ENST00000638175 LARP1Q6PKG0 1096 aaKnown RBP8.49□□□□□ -1.05
SCARB2-206ENST00000638175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.49□□□□□ -1.05
SCARB2-206ENST00000638175 OGFOD1Q8N543 542 aa8.49□□□□□ -1.05
SCARB2-206ENST00000638175 C8orf37Q96NL8 207 aa8.49□□□□□ -1.05
SCARB2-206ENST00000638175 DNAAF2Q9NVR5 837 aaKnown RBP8.49□□□□□ -1.05
SCARB2-206ENST00000638175 BRWD3Q6RI45 1802 aa8.49□□□□□ -1.05
SCARB2-206ENST00000638175 PEAK1Q9H792 1746 aa8.49□□□□□ -1.05
SCARB2-206ENST00000638175 KIAA0232Q92628 1395 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 GCP02774 474 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 NUTM2GQ5VZR2 741 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 ZNF772Q68DY9 489 aaPredicted RBP8.48□□□□□ -1.05
SCARB2-206ENST00000638175 CC2D2BQ6DHV5 1058 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 NME9Q86XW9 330 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 ANKMY2Q8IV38 441 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 STK32AQ8WU08 396 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 KIAA1024Q9UPX6 916 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 BCL9LQ86UU0 1499 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 CAMTA1Q9Y6Y1 1673 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 PARP4Q9UKK3 1724 aaKnown RBP8.48□□□□□ -1.05
SCARB2-206ENST00000638175 AFF2P51816 1311 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 GLI3P10071 1580 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 RTL1A6NKG5 1358 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 KIF24Q5T7B8 1368 aa8.48□□□□□ -1.05
SCARB2-206ENST00000638175 ATRNO75882 1429 aa8.47□□□□□ -1.05
SCARB2-206ENST00000638175 BLMP54132 1417 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms