RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 PAG1Q9NWQ8 432 aa14.79□□□□□ -0.04
CACNA1D-228ENST00000638120 NDUFB9Q9Y6M9 179 aa14.79□□□□□ -0.04
CACNA1D-228ENST00000638120 ADORA1P30542 326 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 PTH1RQ03431 593 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 CCDC158Q5M9N0 1113 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 USPL1Q5W0Q7 1092 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 FAM196AQ6ZSG2 479 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 SMIM5Q71RC9 77 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 DDX46Q7L014 1031 aaKnown RBP14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 KRT27Q7Z3Y8 459 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 CHMP5Q9NZZ3 219 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 MROH5Q6ZUA9 1318 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 NEK4P51957 841 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 NFKBIBQ15653 356 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 TBC1D9BQ66K14 1250 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 SNX14Q9Y5W7 946 aa14.78□□□□□ -0.04
CACNA1D-228ENST00000638120 PDE8BO95263 885 aa14.77□□□□□ -0.05
CACNA1D-228ENST00000638120 TTC39AQ5SRH9 613 aa14.77□□□□□ -0.05
CACNA1D-228ENST00000638120 GORABQ5T7V8 394 aa14.77□□□□□ -0.05
CACNA1D-228ENST00000638120 AMIGO3Q86WK7 504 aa14.77□□□□□ -0.05
CACNA1D-228ENST00000638120 SRP68Q9UHB9 627 aaKnown RBP14.77□□□□□ -0.05
CACNA1D-228ENST00000638120 GOLIM4O00461 696 aa14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 ZPR1O75312 459 aa14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 HSP90AA1P07900 732 aaKnown RBP14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 MCM2P49736 904 aa14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 ERFEQ4G0M1 354 aa14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 MAP4K1Q92918 833 aa14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 KCNB2Q92953 911 aa14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 SEC31BQ9NQW1 1179 aa14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 CIZ1Q9ULV3 898 aaPredicted RBP14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 UBR3Q6ZT12 1888 aa14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 ZNF589Q86UQ0 364 aaPredicted RBP14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 RASEFQ8IZ41 740 aa14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 ARHGEF1Q92888 912 aaKnown RBP14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 LRRC4BQ9NT99 713 aa14.76□□□□□ -0.05
CACNA1D-228ENST00000638120 FGFR2P21802 821 aa14.75□□□□□ -0.05
CACNA1D-228ENST00000638120 NECTIN1Q15223 517 aa14.75□□□□□ -0.05
CACNA1D-228ENST00000638120 PUM3Q15397 648 aaKnown RBP14.75□□□□□ -0.05
CACNA1D-228ENST00000638120 BICDL1Q6ZP65 573 aa14.75□□□□□ -0.05
CACNA1D-228ENST00000638120 MPHOSPH8Q99549 860 aa14.75□□□□□ -0.05
CACNA1D-228ENST00000638120 NYXQ9GZU5 481 aa14.75□□□□□ -0.05
CACNA1D-228ENST00000638120 RBM8AQ9Y5S9 174 aaKnown RBP14.75□□□□□ -0.05
CACNA1D-228ENST00000638120 COL4A1P02462 1669 aa14.75□□□□□ -0.05
CACNA1D-228ENST00000638120 AKAP11Q9UKA4 1901 aa14.74□□□□□ -0.05
CACNA1D-228ENST00000638120 IGHMBP2P38935 993 aaKnown RBP14.74□□□□□ -0.05
CACNA1D-228ENST00000638120 SF3B3Q15393 1217 aaKnown RBP14.74□□□□□ -0.05
CACNA1D-228ENST00000638120 SLC10A5Q5PT55 438 aa14.74□□□□□ -0.05
CACNA1D-228ENST00000638120 ZNF772Q68DY9 489 aaPredicted RBP14.74□□□□□ -0.05
CACNA1D-228ENST00000638120 LPIN2Q92539 896 aa14.74□□□□□ -0.05
CACNA1D-228ENST00000638120 ZNF512BQ96KM6 892 aaPredicted RBP14.74□□□□□ -0.05
CACNA1D-228ENST00000638120 SETDB2Q96T68 719 aa14.74□□□□□ -0.05
CACNA1D-228ENST00000638120 UPF3BQ9BZI7 483 aaKnown RBP14.74□□□□□ -0.05
CACNA1D-228ENST00000638120 A0A1B0GUL6 1792 aa14.74□□□□□ -0.05
CACNA1D-228ENST00000638120 TAF5LO75529 589 aa14.73□□□□□ -0.05
CACNA1D-228ENST00000638120 ADRA2BP18089 450 aa14.73□□□□□ -0.05
CACNA1D-228ENST00000638120 RBM6P78332 1123 aaKnown RBP14.73□□□□□ -0.05
CACNA1D-228ENST00000638120 SCARF1Q14162 830 aa14.73□□□□□ -0.05
CACNA1D-228ENST00000638120 MCMDC2Q4G0Z9 681 aa14.73□□□□□ -0.05
CACNA1D-228ENST00000638120 SLC27A3Q5K4L6 730 aa14.73□□□□□ -0.05
CACNA1D-228ENST00000638120 PRPF40BQ6NWY9 871 aaKnown RBP14.73□□□□□ -0.05
CACNA1D-228ENST00000638120 CDC5LQ99459 802 aaKnown RBP14.73□□□□□ -0.05
CACNA1D-228ENST00000638120 CHGBP05060 677 aa14.73□□□□□ -0.05
CACNA1D-228ENST00000638120 TRAPPC3LQ5T215 181 aa14.73□□□□□ -0.05
CACNA1D-228ENST00000638120 MYH7P12883 1935 aa14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 TRIM37O94972 964 aa14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 GTF2E1P29083 439 aaPredicted RBP14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 RFC4P35249 363 aa14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 KCNJ4P48050 445 aa14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 FKBP4Q02790 459 aaKnown RBP eCLIP14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 ZMYM1Q5SVZ6 1142 aa14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 CREB3L3Q68CJ9 461 aa14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 C3orf67Q6ZVT6 689 aa14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 SEC62Q99442 399 aaKnown RBP14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 HELLSQ9NRZ9 838 aa14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
CACNA1D-228ENST00000638120 FRAT2O75474 233 aaPredicted RBP14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 PHF14O94880 888 aa14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 SLC5A1P13866 664 aa14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 ZKSCAN1P17029 563 aaPredicted RBP14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 ARID4AP29374 1257 aaPredicted RBP14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 MCAMP43121 646 aa14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 LRRFIP1Q32MZ4 808 aaKnown RBP14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 NBPF5PQ86XG9 351 aaPredicted RBP14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 HELBQ8NG08 1087 aaPredicted RBP14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 TMX3Q96JJ7 454 aa14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 TTC14Q96N46 770 aa14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 TM6SF1Q9BZW5 370 aa14.71□□□□□ -0.05
CACNA1D-228ENST00000638120 SLC27A2O14975 620 aa14.71□□□□□ -0.06
CACNA1D-228ENST00000638120 RNF113AO15541 343 aaKnown RBP14.71□□□□□ -0.06
CACNA1D-228ENST00000638120 SSFA2P28290 1259 aa14.71□□□□□ -0.06
CACNA1D-228ENST00000638120 ZAP70P43403 619 aa14.71□□□□□ -0.06
CACNA1D-228ENST00000638120 RNF20Q5VTR2 975 aa14.71□□□□□ -0.06
CACNA1D-228ENST00000638120 CCDC129Q6ZRS4 1044 aa14.71□□□□□ -0.06
CACNA1D-228ENST00000638120 HMG20BQ9P0W2 317 aa14.71□□□□□ -0.06
CACNA1D-228ENST00000638120 CARMIL3Q8ND23 1372 aa14.71□□□□□ -0.06
CACNA1D-228ENST00000638120 RPAP1Q9BWH6 1393 aaPredicted RBP14.71□□□□□ -0.06
CACNA1D-228ENST00000638120 ZFYP08048 801 aaPredicted RBP14.7□□□□□ -0.06
CACNA1D-228ENST00000638120 UQCRFS1P1P0C7P4 283 aa14.7□□□□□ -0.06
CACNA1D-228ENST00000638120 PHKA1P46020 1223 aa14.7□□□□□ -0.06
CACNA1D-228ENST00000638120 CCDC102BQ68D86 513 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms