RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 WAPLQ7Z5K2 1190 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 FILIP1Q7Z7B0 1213 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 SPC24Q8NBT2 197 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 CRACR2AQ9BSW2 395 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 NUP62CLQ9H1M0 184 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 CCNL1Q9UK58 526 aaPredicted RBP6.98□□□□□ -1.29
SCN1A-217ENST00000637988 USP21Q9UK80 565 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 ATP2A1O14983 1001 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 CRCPO75575 148 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 IDEP14735 1019 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 PRPF4BQ13523 1007 aaKnown RBP6.98□□□□□ -1.29
SCN1A-217ENST00000637988 AS3MTQ9HBK9 375 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 RAB3GAP1Q15042 981 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 RPAP2Q8IXW5 612 aaPredicted RBP6.98□□□□□ -1.29
SCN1A-217ENST00000637988 CNNM3Q8NE01 707 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 TBC1D31Q96DN5 1066 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 FAM193BQ96PV7 902 aaPredicted RBP6.98□□□□□ -1.29
SCN1A-217ENST00000637988 PTPRCP08575 1304 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 TMCO5BA8MYB1 307 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 GOLIM4O00461 696 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 CYP7A1P22680 504 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 WTAPQ15007 396 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 ZBTB33Q86T24 672 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 IFT74Q96LB3 600 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 ABT1Q9ULW3 272 aaKnown RBP6.98□□□□□ -1.29
SCN1A-217ENST00000637988 HMGXB3Q12766 1538 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 CEBPAP49715 358 aaPredicted RBP6.98□□□□□ -1.29
SCN1A-217ENST00000637988 DZIP3Q86Y13 1208 aaKnown RBP6.98□□□□□ -1.29
SCN1A-217ENST00000637988 NCOA7Q8NI08 942 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 DDX11Q96FC9 970 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 CCDC114Q96M63 670 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 CFAP74Q9C0B2 1584 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 AZI2Q9H6S1 392 aa6.98□□□□□ -1.29
SCN1A-217ENST00000637988 MAGEB6P1A0A0J9YX57 407 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 ZSCAN12O43309 604 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 PROCA1Q8NCQ7 364 aaPredicted RBP6.97□□□□□ -1.29
SCN1A-217ENST00000637988 NAP1L4Q99733 375 aaKnown RBP6.97□□□□□ -1.29
SCN1A-217ENST00000637988 STK24Q9Y6E0 443 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 ZFYP08048 801 aaPredicted RBP6.97□□□□□ -1.29
SCN1A-217ENST00000637988 METAP2P50579 478 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCN1A-217ENST00000637988 SULF1Q8IWU6 871 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 RSPH6AQ9H0K4 717 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 SH2B1Q9NRF2 756 aaPredicted RBP6.97□□□□□ -1.29
SCN1A-217ENST00000637988 RASAL2Q9UJF2 1139 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 NESP48681 1621 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 PCDH11XQ9BZA7 1347 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 PCDH11YQ9BZA8 1340 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 STK10O94804 968 aaKnown RBP6.97□□□□□ -1.29
SCN1A-217ENST00000637988 XRCC6P12956 609 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCN1A-217ENST00000637988 NAPAP54920 295 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 MRVI1Q9Y6F6 885 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 PLEKHH1Q9ULM0 1364 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 PRPF40AO75400 957 aaKnown RBP6.97□□□□□ -1.29
SCN1A-217ENST00000637988 ATP2A2P16615 1042 aaKnown RBP6.97□□□□□ -1.29
SCN1A-217ENST00000637988 TSR2Q969E8 191 aaKnown RBP6.97□□□□□ -1.29
SCN1A-217ENST00000637988 EVI5LQ96CN4 794 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 CHRNA2Q15822 529 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 KIAA0753Q2KHM9 967 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 ORC3Q9UBD5 711 aaPredicted RBP6.97□□□□□ -1.29
SCN1A-217ENST00000637988 ADAMTS8Q9UP79 889 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 ZBED4O75132 1171 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 CASQ1P31415 396 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 STRN3Q13033 797 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 GSE1Q14687 1217 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 MCM10Q7L590 875 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 CHD1LQ86WJ1 897 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 A0A1W2PRG0 241 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 STAT6P42226 847 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 IL1RAPL2Q9NP60 686 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 MIS18AQ9NYP9 233 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 IGF1RP08069 1367 aa6.97□□□□□ -1.29
SCN1A-217ENST00000637988 CTAGE5O15320 804 aa6.96□□□□□ -1.29
SCN1A-217ENST00000637988 IARSP41252 1262 aaKnown RBP6.96□□□□□ -1.29
SCN1A-217ENST00000637988 HS1BP3Q53T59 392 aa6.96□□□□□ -1.29
SCN1A-217ENST00000637988 MUM1L1Q5H9M0 696 aa6.96□□□□□ -1.29
SCN1A-217ENST00000637988 MKRN1Q9UHC7 482 aaKnown RBP6.96□□□□□ -1.29
SCN1A-217ENST00000637988 RTL9Q8NET4 1388 aa6.96□□□□□ -1.29
SCN1A-217ENST00000637988 CCDC66A2RUB6 948 aa6.96□□□□□ -1.29
SCN1A-217ENST00000637988 KIF11P52732 1056 aa6.96□□□□□ -1.29
SCN1A-217ENST00000637988 KIFC2Q96AC6 838 aa6.96□□□□□ -1.29
SCN1A-217ENST00000637988 C19orf44Q9H6X5 657 aa6.96□□□□□ -1.29
SCN1A-217ENST00000637988 WDR44Q5JSH3 913 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 GSTA5Q7RTV2 222 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 UBE3BQ7Z3V4 1068 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 RIOK1Q9BRS2 568 aaKnown RBP6.96□□□□□ -1.3
SCN1A-217ENST00000637988 ARHGEF11O15085 1522 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 GNA11P29992 359 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 PSMC4P43686 418 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 TTC6Q86TZ1 520 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 NUTM1Q86Y26 1132 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 FAM43AQ8N2R8 423 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 PPP1R9BQ96SB3 815 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 PIK3R4Q99570 1358 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 GIPC1O14908 333 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 DAPK3O43293 454 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 STX10O60499 249 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 FAM47CQ5HY64 1035 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 DPP8Q6V1X1 898 aaPredicted RBP6.96□□□□□ -1.3
SCN1A-217ENST00000637988 RNF214Q8ND24 703 aa6.96□□□□□ -1.3
SCN1A-217ENST00000637988 SLC4A4Q9Y6R1 1079 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms