RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	RGMB	Q6NW40	437 aa		12.22	□□□□□ -0.45
CACNA1A-256	ENST00000637981	C2orf69	Q8N8R5	385 aa		12.22	□□□□□ -0.45
CACNA1A-256	ENST00000637981	GBA2	Q9HCG7	927 aa	Predicted RBP	12.22	□□□□□ -0.45
CACNA1A-256	ENST00000637981	BABAM1	Q9NWV8	329 aa		12.22	□□□□□ -0.45
CACNA1A-256	ENST00000637981	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.22	□□□□□ -0.45
CACNA1A-256	ENST00000637981	RIMBP2	O15034	1052 aa		12.21	□□□□□ -0.45
CACNA1A-256	ENST00000637981	EGFR	P00533	1210 aa		12.21	□□□□□ -0.45
CACNA1A-256	ENST00000637981	RBM26	Q5T8P6	1007 aa	Known RBP	12.21	□□□□□ -0.45
CACNA1A-256	ENST00000637981	DCPS	Q96C86	337 aa	Known RBP	12.21	□□□□□ -0.45
CACNA1A-256	ENST00000637981	ADM5	C9JUS6	153 aa		12.2	□□□□□ -0.46
CACNA1A-256	ENST00000637981	C6orf229	H3BNL8	230 aa		12.2	□□□□□ -0.46
CACNA1A-256	ENST00000637981	ECE2	O60344	883 aa		12.2	□□□□□ -0.46
CACNA1A-256	ENST00000637981	RPS12	P25398	132 aa	Known RBP	12.2	□□□□□ -0.46
CACNA1A-256	ENST00000637981	ZNF157	P51786	506 aa	Predicted RBP	12.2	□□□□□ -0.46
CACNA1A-256	ENST00000637981	CELF1	Q92879	486 aa	Known RBP	12.2	□□□□□ -0.46
CACNA1A-256	ENST00000637981	CCDC102A	Q96A19	550 aa		12.2	□□□□□ -0.46
CACNA1A-256	ENST00000637981	SAGE1	Q9NXZ1	904 aa		12.2	□□□□□ -0.46
CACNA1A-256	ENST00000637981	POLL	Q9UGP5	575 aa		12.2	□□□□□ -0.46
CACNA1A-256	ENST00000637981	TRIM35	Q9UPQ4	493 aa		12.2	□□□□□ -0.46
CACNA1A-256	ENST00000637981	DDX60	Q8IY21	1712 aa	Known RBP	12.2	□□□□□ -0.46
CACNA1A-256	ENST00000637981	GPSM2	P81274	684 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	KIF23	Q02241	960 aa	Predicted RBP	12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	DOK7	Q18PE1	504 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	KRT24	Q2M2I5	525 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	WDR63	Q8IWG1	891 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	WWC1	Q8IX03	1113 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	FAM89A	Q96GI7	184 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	EYA3	Q99504	573 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	KCNQ5	Q9NR82	932 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	CHPF2	Q9P2E5	772 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	PCDH10	Q9P2E7	1040 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	RTL9	Q8NET4	1388 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	IL16	Q14005	1332 aa		12.19	□□□□□ -0.46
CACNA1A-256	ENST00000637981	TRPA1	O75762	1119 aa		12.18	□□□□□ -0.46
CACNA1A-256	ENST00000637981	GNAI1	P63096	354 aa		12.18	□□□□□ -0.46
CACNA1A-256	ENST00000637981	SF3B3	Q15393	1217 aa	Known RBP	12.18	□□□□□ -0.46
CACNA1A-256	ENST00000637981	KIF4B	Q2VIQ3	1234 aa		12.18	□□□□□ -0.46
CACNA1A-256	ENST00000637981	SULF1	Q8IWU6	871 aa		12.18	□□□□□ -0.46
CACNA1A-256	ENST00000637981	PLBD2	Q8NHP8	589 aa		12.18	□□□□□ -0.46
CACNA1A-256	ENST00000637981	RNF186	Q9NXI6	227 aa		12.18	□□□□□ -0.46
CACNA1A-256	ENST00000637981	POLR2A	P24928	1970 aa	Known RBP	12.18	□□□□□ -0.46
CACNA1A-256	ENST00000637981	COL4A1	P02462	1669 aa		12.17	□□□□□ -0.46
CACNA1A-256	ENST00000637981	ATP5J2-PTCD1	G3V325	749 aa		12.17	□□□□□ -0.46
CACNA1A-256	ENST00000637981	SOX10	P56693	466 aa		12.17	□□□□□ -0.46
CACNA1A-256	ENST00000637981	RTL5	Q5HYW3	569 aa	Predicted RBP	12.17	□□□□□ -0.46
CACNA1A-256	ENST00000637981	ANKRD13D	Q6ZTN6	518 aa		12.17	□□□□□ -0.46
CACNA1A-256	ENST00000637981	IFT57	Q9NWB7	429 aa		12.17	□□□□□ -0.46
CACNA1A-256	ENST00000637981	GGA3	Q9NZ52	723 aa		12.17	□□□□□ -0.46
CACNA1A-256	ENST00000637981	SALL2	Q9Y467	1007 aa	Predicted RBP	12.17	□□□□□ -0.46
CACNA1A-256	ENST00000637981		G3V3G9	751 aa		12.16	□□□□□ -0.46
CACNA1A-256	ENST00000637981	CHL1	O00533	1208 aa		12.16	□□□□□ -0.46
CACNA1A-256	ENST00000637981	SLC10A3	P09131	477 aa		12.16	□□□□□ -0.46
CACNA1A-256	ENST00000637981	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.16	□□□□□ -0.46
CACNA1A-256	ENST00000637981	DCAF8	Q5TAQ9	597 aa		12.16	□□□□□ -0.46
CACNA1A-256	ENST00000637981	TBC1D16	Q8TBP0	767 aa		12.16	□□□□□ -0.46
CACNA1A-256	ENST00000637981	ISCA1	Q9BUE6	129 aa		12.16	□□□□□ -0.46
CACNA1A-256	ENST00000637981	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.16	□□□□□ -0.46
CACNA1A-256	ENST00000637981	LAS1L	Q9Y4W2	734 aa	Known RBP	12.16	□□□□□ -0.46
CACNA1A-256	ENST00000637981	ASTN2	O75129	1339 aa	Predicted RBP	12.16	□□□□□ -0.46
CACNA1A-256	ENST00000637981	AKAP11	Q9UKA4	1901 aa		12.15	□□□□□ -0.46
CACNA1A-256	ENST00000637981	IRS4	O14654	1257 aa	Predicted RBP	12.15	□□□□□ -0.46
CACNA1A-256	ENST00000637981	VIL1	P09327	827 aa	Known RBP	12.15	□□□□□ -0.46
CACNA1A-256	ENST00000637981	RPS8	P62241	208 aa	Known RBP	12.15	□□□□□ -0.46
CACNA1A-256	ENST00000637981	HDGFL1	Q5TGJ6	251 aa		12.15	□□□□□ -0.46
CACNA1A-256	ENST00000637981	CDCA5	Q96FF9	252 aa		12.15	□□□□□ -0.46
CACNA1A-256	ENST00000637981	CSRNP1	Q96S65	589 aa		12.15	□□□□□ -0.46
CACNA1A-256	ENST00000637981	CHMP4A	Q9BY43	222 aa		12.15	□□□□□ -0.46
CACNA1A-256	ENST00000637981	MYH16	Q9H6N6	1097 aa		12.15	□□□□□ -0.46
CACNA1A-256	ENST00000637981	UFL1	O94874	794 aa		12.14	□□□□□ -0.47
CACNA1A-256	ENST00000637981	GOLGA2	Q08379	1002 aa		12.14	□□□□□ -0.47
CACNA1A-256	ENST00000637981	ANKIB1	Q9P2G1	1089 aa		12.14	□□□□□ -0.47
CACNA1A-256	ENST00000637981	DBF4	Q9UBU7	674 aa	Predicted RBP	12.14	□□□□□ -0.47
CACNA1A-256	ENST00000637981	SCN9A	Q15858	1988 aa		12.14	□□□□□ -0.47
CACNA1A-256	ENST00000637981	TNRC18	O15417	2968 aa	Predicted RBP	12.14	□□□□□ -0.47
CACNA1A-256	ENST00000637981	ZNF853	P0CG23	659 aa		12.13	□□□□□ -0.47
CACNA1A-256	ENST00000637981	SCARF1	Q14162	830 aa		12.13	□□□□□ -0.47
CACNA1A-256	ENST00000637981	ANGEL2	Q5VTE6	544 aa	Known RBP	12.13	□□□□□ -0.47
CACNA1A-256	ENST00000637981	CTU1	Q7Z7A3	348 aa	Known RBP	12.13	□□□□□ -0.47
CACNA1A-256	ENST00000637981	RASAL3	Q86YV0	1011 aa		12.13	□□□□□ -0.47
CACNA1A-256	ENST00000637981	REM2	Q8IYK8	340 aa	Predicted RBP	12.13	□□□□□ -0.47
CACNA1A-256	ENST00000637981	PODXL2	Q9NZ53	605 aa		12.13	□□□□□ -0.47
CACNA1A-256	ENST00000637981	GGA1	Q9UJY5	639 aa		12.13	□□□□□ -0.47
CACNA1A-256	ENST00000637981		E9PSI1	815 aa		12.12	□□□□□ -0.47
CACNA1A-256	ENST00000637981	HOXB7	P09629	217 aa		12.12	□□□□□ -0.47
CACNA1A-256	ENST00000637981	ZNF280A	P59817	542 aa	Predicted RBP	12.12	□□□□□ -0.47
CACNA1A-256	ENST00000637981	TRIM28	Q13263	835 aa	Known RBP	12.12	□□□□□ -0.47
CACNA1A-256	ENST00000637981	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.12	□□□□□ -0.47
CACNA1A-256	ENST00000637981	AGBL3	Q8NEM8	1001 aa		12.12	□□□□□ -0.47
CACNA1A-256	ENST00000637981	SEC31B	Q9NQW1	1179 aa		12.12	□□□□□ -0.47
CACNA1A-256	ENST00000637981	HYPK	Q9NX55	129 aa		12.12	□□□□□ -0.47
CACNA1A-256	ENST00000637981	ZBED9	Q6R2W3	1325 aa		12.12	□□□□□ -0.47
CACNA1A-256	ENST00000637981	ZNF521	Q96K83	1311 aa		12.12	□□□□□ -0.47
CACNA1A-256	ENST00000637981	FKBP1B	P68106	108 aa		12.11	□□□□□ -0.47
CACNA1A-256	ENST00000637981	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.11	□□□□□ -0.47
CACNA1A-256	ENST00000637981	ZNF609	O15014	1411 aa		12.11	□□□□□ -0.47
CACNA1A-256	ENST00000637981	PAPPA2	Q9BXP8	1791 aa		12.11	□□□□□ -0.47
CACNA1A-256	ENST00000637981	HSP90B1	P14625	803 aa	Known RBP	12.11	□□□□□ -0.47
CACNA1A-256	ENST00000637981	CCDC152	Q4G0S7	254 aa		12.11	□□□□□ -0.47
CACNA1A-256	ENST00000637981	DUSP27	Q5VZP5	1158 aa		12.11	□□□□□ -0.47
CACNA1A-256	ENST00000637981	RIC3	Q7Z5B4	369 aa		12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms