RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 NBPF5PQ86XG9 351 aaPredicted RBP7.6□□□□□ -1.19
CACNA1D-227ENST00000637844 PUS3Q9BZE2 481 aaKnown RBP7.6□□□□□ -1.19
CACNA1D-227ENST00000637844 PAG1Q9NWQ8 432 aa7.6□□□□□ -1.19
CACNA1D-227ENST00000637844 RIC1Q4ADV7 1423 aa7.6□□□□□ -1.19
CACNA1D-227ENST00000637844 CARMIL3Q8ND23 1372 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 K7ELQ4 463 aaPredicted RBP7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 PHF14O94880 888 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 TRIM37O94972 964 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 PDE8BO95263 885 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 UQCRFS1P1P0C7P4 283 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 SLC5A1P13866 664 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 PUM3Q15397 648 aaKnown RBP7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 RNF20Q5VTR2 975 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 TBC1D9BQ66K14 1250 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 ZSCAN25Q6NSZ9 544 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 BICDL1Q6ZP65 573 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 ANKRD18AQ8IVF6 992 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 SYNE4Q8N205 404 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 KBTBD3Q8NAB2 608 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 LPIN2Q92539 896 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 ARHGEF1Q92888 912 aaKnown RBP7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 XAGE2Q96GT9 111 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 NLRP3Q96P20 1036 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 ANP32EQ9BTT0 268 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 RIPOR2Q9Y4F9 1068 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 UBR3Q6ZT12 1888 aa7.59□□□□□ -1.19
CACNA1D-227ENST00000637844 GOLIM4O00461 696 aa7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 ZFYP08048 801 aaPredicted RBP7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 ZKSCAN1P17029 563 aaPredicted RBP7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 SSFA2P28290 1259 aa7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 NMIQ13287 307 aaPredicted RBP7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 TTF1Q15361 905 aaPredicted RBP7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 SF3B3Q15393 1217 aaKnown RBP7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 ERFEQ4G0M1 354 aa7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 SLC10A5Q5PT55 438 aa7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 SRP68Q9UHB9 627 aaKnown RBP7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 RGPD3A6NKT7 1758 aaPredicted RBP7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 RGPD4Q7Z3J3 1758 aa7.58□□□□□ -1.2
CACNA1D-227ENST00000637844 CCDC171Q6TFL3 1326 aa7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 HSPA4P34932 840 aa7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 ST5P78524 1137 aa7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 FKBP4Q02790 459 aaKnown RBP eCLIP7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 MCMDC2Q4G0Z9 681 aa7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 DDX46Q7L014 1031 aaKnown RBP7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 FLAD1Q8NFF5 587 aa7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 ZNF512BQ96KM6 892 aaPredicted RBP7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 KIF2CQ99661 725 aa7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 LSG1Q9H089 658 aaKnown RBP7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 SNRKQ9NRH2 765 aa7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 HELLSQ9NRZ9 838 aa7.57□□□□□ -1.2
CACNA1D-227ENST00000637844 MYH7P12883 1935 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 A0A1B0GUL6 1792 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 PLSCR1O15162 318 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 RNF113AO15541 343 aaKnown RBP7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 APBA3O96018 575 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 PSMA5P28066 241 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 NEK4P51957 841 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 TXNRD1Q16881 649 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 VGLL2Q8N8G2 317 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 CNBD1Q8NA66 436 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 FAM227BQ96M60 508 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 ANKRD2Q9GZV1 360 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 SLKQ9H2G2 1235 aaPredicted RBP7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 BCL2L12Q9HB09 334 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 GNL3LQ9NVN8 582 aaKnown RBP7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 CHMP5Q9NZZ3 219 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 HMG20BQ9P0W2 317 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 MED23Q9ULK4 1368 aa7.56□□□□□ -1.2
CACNA1D-227ENST00000637844 TNS1Q9HBL0 1735 aaKnown RBP7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 A0A0D9SFI3 127 aa7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 ADORA1P30542 326 aa7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 KRT32Q14532 448 aa7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 SPRYD3Q8NCJ5 442 aa7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 IL17RAQ96F46 866 aa7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 SEC31BQ9NQW1 1179 aa7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 LRRC4BQ9NT99 713 aa7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 BSDC1Q9NW68 430 aaPredicted RBP7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 CIZ1Q9ULV3 898 aaPredicted RBP7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 RBM8AQ9Y5S9 174 aaKnown RBP7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 U3KPZ7 1027 aaPredicted RBP7.55□□□□□ -1.2
CACNA1D-227ENST00000637844 FGFR2P21802 821 aa7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 ARID4AP29374 1257 aaPredicted RBP7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 RPS8P62241 208 aaKnown RBP7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 CHRNDQ07001 517 aa7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 UBE4AQ14139 1066 aa7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 NFIXQ14938 502 aa7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 WASHC4Q2M389 1173 aa7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 CAVIN4Q5BKX8 364 aa7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 CCDC102BQ68D86 513 aa7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 PRPF40BQ6NWY9 871 aaKnown RBP7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 VPS37DQ86XT2 251 aa7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 HELBQ8NG08 1087 aaPredicted RBP7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 RPGRQ92834 1020 aaKnown RBP7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 MAP4K1Q92918 833 aa7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 EDC3Q96F86 508 aaKnown RBP7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 TM6SF1Q9BZW5 370 aa7.54□□□□□ -1.2
CACNA1D-227ENST00000637844 CWC22Q9HCG8 908 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms