RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 CEP57Q86XR8 500 aa20.42■□□□□ 0.86
CACNA1A-247ENST00000637769 KLHL40Q2TBA0 621 aa20.42■□□□□ 0.86
CACNA1A-247ENST00000637769 TMEM132EQ6IEE7 984 aa20.42■□□□□ 0.86
CACNA1A-247ENST00000637769 PHLDB2Q86SQ0 1253 aa20.42■□□□□ 0.86
CACNA1A-247ENST00000637769 CALML3P27482 149 aa20.42■□□□□ 0.86
CACNA1A-247ENST00000637769 CHMP4BP1P59074 171 aa20.42■□□□□ 0.86
CACNA1A-247ENST00000637769 TUBB2AQ13885 445 aa20.42■□□□□ 0.86
CACNA1A-247ENST00000637769 VPS52Q8N1B4 723 aa20.42■□□□□ 0.86
CACNA1A-247ENST00000637769 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.42■□□□□ 0.86
CACNA1A-247ENST00000637769 TUBB2BQ9BVA1 445 aa20.42■□□□□ 0.86
CACNA1A-247ENST00000637769 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
CACNA1A-247ENST00000637769 IL1RAPL2Q9NP60 686 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 TNNC1P63316 161 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 INF2Q27J81 1249 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 HS1BP3Q53T59 392 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 CCDC114Q96M63 670 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 GIPC1O14908 333 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 TAF7Q15545 349 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 SRGAP1Q7Z6B7 1085 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 NKIRAS1Q9NYS0 192 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 CRNKL1Q9BZJ0 848 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 BCAP29Q9UHQ4 241 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 EXOC6BQ9Y2D4 811 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 LMNTD2Q8IXW0 634 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 TMEM57Q8N5G2 664 aa20.41■□□□□ 0.86
CACNA1A-247ENST00000637769 SATB1Q01826 763 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 CCDC26Q8TAB7 109 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 RSPH14Q9UHP6 348 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 CUL7Q14999 1698 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 PPP1R2P41236 205 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 XPCQ01831 940 aaPredicted RBP20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 CACYBPQ9HB71 228 aaKnown RBP20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 TRPC3Q13507 836 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 GBP7Q8N8V2 638 aaPredicted RBP20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 C6orf50Q9HD87 102 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 TSPY2A6NKD2 308 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 BOLA2Q9H3K6 86 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 ATP6V0A2Q9Y487 856 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 PRDM10Q9NQV6 1147 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 FAM169AQ9Y6X4 670 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 CALCOCO2Q13137 446 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 TAOK1Q7L7X3 1001 aa20.4■□□□□ 0.86
CACNA1A-247ENST00000637769 TSNAXIP1Q2TAA8 658 aa20.39■□□□□ 0.86
CACNA1A-247ENST00000637769 HDXQ7Z353 690 aa20.39■□□□□ 0.86
CACNA1A-247ENST00000637769 NBPF11Q86T75 865 aa20.39■□□□□ 0.86
CACNA1A-247ENST00000637769 ZNF710Q8N1W2 664 aa20.39■□□□□ 0.86
CACNA1A-247ENST00000637769 TMPOP42166 694 aaKnown RBP20.39■□□□□ 0.86
CACNA1A-247ENST00000637769 INTS8Q75QN2 995 aaKnown RBP20.39■□□□□ 0.86
CACNA1A-247ENST00000637769 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.39■□□□□ 0.86
CACNA1A-247ENST00000637769 FAM76AQ8TAV0 307 aa20.39■□□□□ 0.85
CACNA1A-247ENST00000637769 SPINK5Q9NQ38 1064 aaPredicted RBP20.39■□□□□ 0.85
CACNA1A-247ENST00000637769 CRCPO75575 148 aa20.39■□□□□ 0.85
CACNA1A-247ENST00000637769 IRX3P78415 501 aaPredicted RBP20.39■□□□□ 0.85
CACNA1A-247ENST00000637769 NSD3Q9BZ95 1437 aa20.39■□□□□ 0.85
CACNA1A-247ENST00000637769 GJB2P29033 226 aa20.39■□□□□ 0.85
CACNA1A-247ENST00000637769 IRX4P78413 519 aa20.38■□□□□ 0.85
CACNA1A-247ENST00000637769 KIFAP3Q92845 792 aa20.38■□□□□ 0.85
CACNA1A-247ENST00000637769 DBF4Q9UBU7 674 aaPredicted RBP20.38■□□□□ 0.85
CACNA1A-247ENST00000637769 DUSP27Q5VZP5 1158 aa20.38■□□□□ 0.85
CACNA1A-247ENST00000637769 SLC8A3P57103 927 aa20.38■□□□□ 0.85
CACNA1A-247ENST00000637769 BMP2KLQ5H9B9 411 aa20.38■□□□□ 0.85
CACNA1A-247ENST00000637769 PPP1R7Q15435 360 aa20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 CYB5RLQ6IPT4 315 aa20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 TIAM1Q13009 1591 aa20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 NSD2O96028 1365 aa20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 LRPPRCP42704 1394 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 STK10O94804 968 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 ZNF853P0CG23 659 aa20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 ANKRD24Q8TF21 1146 aa20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 TNPO1Q92973 898 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 ANKLE2Q86XL3 938 aa20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 FAM200AQ8TCP9 573 aa20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 ACTN4O43707 911 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 HS2ST1Q7LGA3 356 aa20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 CCDC42Q96M95 316 aa20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 CABP1Q9NZU7 370 aa20.37■□□□□ 0.85
CACNA1A-247ENST00000637769 NEK11Q8NG66 645 aa20.36■□□□□ 0.85
CACNA1A-247ENST00000637769 TACC3Q9Y6A5 838 aa20.36■□□□□ 0.85
CACNA1A-247ENST00000637769 GIGYF1O75420 1035 aaPredicted RBP20.36■□□□□ 0.85
CACNA1A-247ENST00000637769 POTEDQ86YR6 584 aa20.36■□□□□ 0.85
CACNA1A-247ENST00000637769 SKILP12757 684 aa20.36■□□□□ 0.85
CACNA1A-247ENST00000637769 NUTM1Q86Y26 1132 aa20.36■□□□□ 0.85
CACNA1A-247ENST00000637769 CNGA4Q8IV77 575 aa20.36■□□□□ 0.85
CACNA1A-247ENST00000637769 MICALL1Q8N3F8 863 aa20.36■□□□□ 0.85
CACNA1A-247ENST00000637769 VCX3AQ9NNX9 186 aa20.36■□□□□ 0.85
CACNA1A-247ENST00000637769 RASSF2P50749 326 aa20.36■□□□□ 0.85
CACNA1A-247ENST00000637769 CCDC62Q6P9F0 684 aa20.36■□□□□ 0.85
CACNA1A-247ENST00000637769 PTPN23Q9H3S7 1636 aa20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 ESR2Q92731 530 aa20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 TTC21BQ7Z4L5 1316 aa20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 NEDD9Q14511 834 aa20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 SEC62Q99442 399 aaKnown RBP20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 EEF2P13639 858 aaKnown RBP20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 PLCB3Q01970 1234 aa20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 GEN1Q17RS7 908 aa20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 USP16Q9Y5T5 823 aa20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 LIG1P18858 919 aa20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 RPL13P26373 211 aaKnown RBP20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 WTAPQ15007 396 aa20.35■□□□□ 0.85
CACNA1A-247ENST00000637769 ATL3Q6DD88 541 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms