RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 ECE2O60344 883 aa16.81■□□□□ 0.28
SYNGAP1-224ENST00000637721 CTSWP56202 376 aa16.81■□□□□ 0.28
SYNGAP1-224ENST00000637721 FLIIQ13045 1269 aa16.81■□□□□ 0.28
SYNGAP1-224ENST00000637721 COL13A1Q5TAT6 717 aaPredicted RBP16.81■□□□□ 0.28
SYNGAP1-224ENST00000637721 DBNDD1Q9H9R9 158 aa16.81■□□□□ 0.28
SYNGAP1-224ENST00000637721 PSMD14O00487 310 aa16.8■□□□□ 0.28
SYNGAP1-224ENST00000637721 UFL1O94874 794 aa16.8■□□□□ 0.28
SYNGAP1-224ENST00000637721 ECE1P42892 770 aa16.8■□□□□ 0.28
SYNGAP1-224ENST00000637721 CDC37L1Q7L3B6 337 aa16.8■□□□□ 0.28
SYNGAP1-224ENST00000637721 AIDAQ96BJ3 306 aa16.8■□□□□ 0.28
SYNGAP1-224ENST00000637721 MYH16Q9H6N6 1097 aa16.8■□□□□ 0.28
SYNGAP1-224ENST00000637721 G3V3G9 751 aa16.79■□□□□ 0.28
SYNGAP1-224ENST00000637721 H7C1W4 665 aa16.79■□□□□ 0.28
SYNGAP1-224ENST00000637721 VAMP4O75379 141 aa16.79■□□□□ 0.28
SYNGAP1-224ENST00000637721 ATP2B4P23634 1241 aa16.79■□□□□ 0.28
SYNGAP1-224ENST00000637721 FKBP5Q13451 457 aaPredicted RBP16.79■□□□□ 0.28
SYNGAP1-224ENST00000637721 DCAF8Q5TAQ9 597 aa16.79■□□□□ 0.28
SYNGAP1-224ENST00000637721 MICALL2Q8IY33 904 aa16.79■□□□□ 0.28
SYNGAP1-224ENST00000637721 TTLL11Q8NHH1 800 aa16.79■□□□□ 0.28
SYNGAP1-224ENST00000637721 PLA2G12BQ9BX93 195 aa16.79■□□□□ 0.28
SYNGAP1-224ENST00000637721 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
SYNGAP1-224ENST00000637721 ZNF609O15014 1411 aa16.79■□□□□ 0.28
SYNGAP1-224ENST00000637721 WDR33Q9C0J8 1336 aaKnown RBP16.78■□□□□ 0.28
SYNGAP1-224ENST00000637721 MAP2K1Q02750 393 aaPredicted RBP16.78■□□□□ 0.28
SYNGAP1-224ENST00000637721 G2E3Q7L622 706 aa16.78■□□□□ 0.28
SYNGAP1-224ENST00000637721 DNAAF4Q8WXU2 420 aa16.78■□□□□ 0.28
SYNGAP1-224ENST00000637721 TLL2Q9Y6L7 1015 aa16.78■□□□□ 0.28
SYNGAP1-224ENST00000637721 PSME4Q14997 1843 aa16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 VIL1P09327 827 aaKnown RBP16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 HIRAP54198 1017 aaPredicted RBP16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 GCKRQ14397 625 aa16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 DOK7Q18PE1 504 aa16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 CWF19L2Q2TBE0 894 aaKnown RBP16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 CST9Q5W186 159 aa16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 DIEXFQ68CQ4 756 aaKnown RBP16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 PODNQ7Z5L7 613 aa16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 TNS4Q8IZW8 715 aa16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 LINS1Q8NG48 757 aa16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 TRPM4Q8TD43 1214 aa16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 JARID2Q92833 1246 aaPredicted RBP16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 HHIPL1Q96JK4 782 aa16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 CCDC85AQ96PX6 553 aaPredicted RBP16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 WBP1LQ9NX94 342 aa16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
SYNGAP1-224ENST00000637721 TRAF5O00463 557 aa16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 CELF2O95319 508 aaKnown RBP16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 IGHMBP2P38935 993 aaKnown RBP16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 CTCFP49711 727 aaPredicted RBP16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 EXOSC9Q06265 439 aaKnown RBP16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 UBE3BQ7Z3V4 1068 aa16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 AGBL3Q8NEM8 1001 aa16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 GREM2Q9H772 168 aa16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 PRDM10Q9NQV6 1147 aa16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 THSD7BQ9C0I4 1608 aa16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 SCN9AQ15858 1988 aa16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 MED23Q9ULK4 1368 aa16.76■□□□□ 0.27
SYNGAP1-224ENST00000637721 GLIS2Q9BZE0 524 aaPredicted RBP16.75■□□□□ 0.27
SYNGAP1-224ENST00000637721 MINPP1Q9UNW1 487 aa16.75■□□□□ 0.27
SYNGAP1-224ENST00000637721 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
SYNGAP1-224ENST00000637721 FOXN1O15353 648 aa16.74■□□□□ 0.27
SYNGAP1-224ENST00000637721 RSBN1LQ6PCB5 846 aaPredicted RBP16.74■□□□□ 0.27
SYNGAP1-224ENST00000637721 SAPCD2Q86UD0 394 aa16.74■□□□□ 0.27
SYNGAP1-224ENST00000637721 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
SYNGAP1-224ENST00000637721 CAPNS2Q96L46 248 aa16.74■□□□□ 0.27
SYNGAP1-224ENST00000637721 GPR101Q96P66 508 aaPredicted RBP16.74■□□□□ 0.27
SYNGAP1-224ENST00000637721 ANKRD2Q9GZV1 360 aa16.74■□□□□ 0.27
SYNGAP1-224ENST00000637721 LEMD3Q9Y2U8 911 aa16.74■□□□□ 0.27
SYNGAP1-224ENST00000637721 CSF1RP07333 972 aa16.73■□□□□ 0.27
SYNGAP1-224ENST00000637721 MAP2K2P36507 400 aa16.73■□□□□ 0.27
SYNGAP1-224ENST00000637721 MMP14P50281 582 aa16.73■□□□□ 0.27
SYNGAP1-224ENST00000637721 CCT4P50991 539 aaKnown RBP16.73■□□□□ 0.27
SYNGAP1-224ENST00000637721 CASP7P55210 303 aa16.73■□□□□ 0.27
SYNGAP1-224ENST00000637721 FMR1Q06787 632 aaKnown RBP eCLIP16.73■□□□□ 0.27
SYNGAP1-224ENST00000637721 PAXIP1Q6ZW49 1069 aaPredicted RBP16.73■□□□□ 0.27
SYNGAP1-224ENST00000637721 SAMD7Q7Z3H4 446 aa16.73■□□□□ 0.27
SYNGAP1-224ENST00000637721 KCNQ5Q9NR82 932 aa16.73■□□□□ 0.27
SYNGAP1-224ENST00000637721 POLR2AP24928 1970 aaKnown RBP16.73■□□□□ 0.27
SYNGAP1-224ENST00000637721 SPEF2Q9C093 1822 aa16.73■□□□□ 0.27
SYNGAP1-224ENST00000637721 SHTN1A0MZ66 631 aa16.72■□□□□ 0.27
SYNGAP1-224ENST00000637721 KIF4BQ2VIQ3 1234 aa16.72■□□□□ 0.27
SYNGAP1-224ENST00000637721 TBC1D10BQ4KMP7 808 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-224ENST00000637721 DCPSQ96C86 337 aaKnown RBP16.72■□□□□ 0.27
SYNGAP1-224ENST00000637721 MPHOSPH8Q99549 860 aa16.72■□□□□ 0.27
SYNGAP1-224ENST00000637721 BEGAINQ9BUH8 593 aa16.72■□□□□ 0.27
SYNGAP1-224ENST00000637721 USP17L3A6NCW0 530 aa16.71■□□□□ 0.27
SYNGAP1-224ENST00000637721 USP17L4A6NCW7 530 aa16.71■□□□□ 0.27
SYNGAP1-224ENST00000637721 ITGA6P23229 1130 aa16.71■□□□□ 0.27
SYNGAP1-224ENST00000637721 ZNF280AP59817 542 aaPredicted RBP16.71■□□□□ 0.27
SYNGAP1-224ENST00000637721 CYP4F22Q6NT55 531 aa16.71■□□□□ 0.27
SYNGAP1-224ENST00000637721 USP17L1Q7RTZ2 530 aa16.71■□□□□ 0.27
SYNGAP1-224ENST00000637721 KRT26Q7Z3Y9 468 aa16.71■□□□□ 0.27
SYNGAP1-224ENST00000637721 USP48Q86UV5 1035 aa16.71■□□□□ 0.27
SYNGAP1-224ENST00000637721 MYO3BQ8WXR4 1341 aa16.7■□□□□ 0.26
SYNGAP1-224ENST00000637721 ANKRD18BA2A2Z9 1011 aa16.7■□□□□ 0.26
SYNGAP1-224ENST00000637721 BEND3Q5T5X7 828 aa16.7■□□□□ 0.26
SYNGAP1-224ENST00000637721 COA1Q9GZY4 146 aa16.7■□□□□ 0.26
SYNGAP1-224ENST00000637721 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
SYNGAP1-224ENST00000637721 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
SYNGAP1-224ENST00000637721 USP17L8P0C7I0 530 aa16.69■□□□□ 0.26
SYNGAP1-224ENST00000637721 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms