RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 MSH5O43196 834 aa20.5■□□□□ 0.87
CLCN2-220ENST00000637538 CDC5LQ99459 802 aaKnown RBP20.49■□□□□ 0.87
CLCN2-220ENST00000637538 CNNM1Q9NRU3 951 aa20.49■□□□□ 0.87
CLCN2-220ENST00000637538 TAF1P21675 1872 aa20.49■□□□□ 0.87
CLCN2-220ENST00000637538 A0A1B0GUL6 1792 aa20.48■□□□□ 0.87
CLCN2-220ENST00000637538 GLRX3O76003 335 aaKnown RBP20.48■□□□□ 0.87
CLCN2-220ENST00000637538 PTGER2P43116 358 aa20.48■□□□□ 0.87
CLCN2-220ENST00000637538 CRY2Q49AN0 593 aa20.48■□□□□ 0.87
CLCN2-220ENST00000637538 GPATCH3Q96I76 525 aa20.48■□□□□ 0.87
CLCN2-220ENST00000637538 ATF5Q9Y2D1 282 aaPredicted RBP20.48■□□□□ 0.87
CLCN2-220ENST00000637538 MROH5Q6ZUA9 1318 aa20.48■□□□□ 0.87
CLCN2-220ENST00000637538 ANKRD31Q8N7Z5 1873 aa20.48■□□□□ 0.87
CLCN2-220ENST00000637538 KLRG2A4D1S0 409 aaPredicted RBP20.48■□□□□ 0.87
CLCN2-220ENST00000637538 IGHMBP2P38935 993 aaKnown RBP20.48■□□□□ 0.87
CLCN2-220ENST00000637538 METTL24Q5JXM2 366 aa20.48■□□□□ 0.87
CLCN2-220ENST00000637538 SGIP1Q9BQI5 828 aa20.48■□□□□ 0.87
CLCN2-220ENST00000637538 DBNDD2Q9BQY9 259 aa20.48■□□□□ 0.87
CLCN2-220ENST00000637538 A0A1B0GUL7 405 aa20.47■□□□□ 0.87
CLCN2-220ENST00000637538 ERC2O15083 957 aa20.47■□□□□ 0.87
CLCN2-220ENST00000637538 ST5P78524 1137 aa20.47■□□□□ 0.87
CLCN2-220ENST00000637538 ARAP2Q8WZ64 1704 aa20.47■□□□□ 0.87
CLCN2-220ENST00000637538 MPHOSPH8Q99549 860 aa20.47■□□□□ 0.87
CLCN2-220ENST00000637538 AKAP2Q9Y2D5 859 aa20.47■□□□□ 0.87
CLCN2-220ENST00000637538 CDC45O75419 566 aa20.46■□□□□ 0.87
CLCN2-220ENST00000637538 PDE8BO95263 885 aa20.46■□□□□ 0.87
CLCN2-220ENST00000637538 SEC24BO95487 1268 aa20.46■□□□□ 0.87
CLCN2-220ENST00000637538 MMP10P09238 476 aa20.46■□□□□ 0.87
CLCN2-220ENST00000637538 TIMM10P62072 90 aa20.46■□□□□ 0.87
CLCN2-220ENST00000637538 ANKRD18AQ8IVF6 992 aa20.46■□□□□ 0.87
CLCN2-220ENST00000637538 CELF1Q92879 486 aaKnown RBP20.46■□□□□ 0.87
CLCN2-220ENST00000637538 BSDC1Q9NW68 430 aaPredicted RBP20.46■□□□□ 0.87
CLCN2-220ENST00000637538 NPHP1O15259 732 aa20.45■□□□□ 0.86
CLCN2-220ENST00000637538 ATP5JP18859 108 aa20.45■□□□□ 0.86
CLCN2-220ENST00000637538 FGFR2P21802 821 aa20.45■□□□□ 0.86
CLCN2-220ENST00000637538 TBC1D9Q6ZT07 1266 aa20.45■□□□□ 0.86
CLCN2-220ENST00000637538 RPS8P62241 208 aaKnown RBP20.43■□□□□ 0.86
CLCN2-220ENST00000637538 ATP2B3Q16720 1220 aa20.43■□□□□ 0.86
CLCN2-220ENST00000637538 MSL1Q68DK7 614 aa20.43■□□□□ 0.86
CLCN2-220ENST00000637538 DDX46Q7L014 1031 aaKnown RBP20.43■□□□□ 0.86
CLCN2-220ENST00000637538 NEUROD6Q96NK8 337 aa20.43■□□□□ 0.86
CLCN2-220ENST00000637538 BRIP1Q9BX63 1249 aa20.43■□□□□ 0.86
CLCN2-220ENST00000637538 PARP3Q9Y6F1 533 aa20.43■□□□□ 0.86
CLCN2-220ENST00000637538 AK9Q5TCS8 1911 aa20.42■□□□□ 0.86
CLCN2-220ENST00000637538 ADORA1P30542 326 aa20.42■□□□□ 0.86
CLCN2-220ENST00000637538 HOXA10P31260 410 aaPredicted RBP20.42■□□□□ 0.86
CLCN2-220ENST00000637538 CHRNDQ07001 517 aa20.42■□□□□ 0.86
CLCN2-220ENST00000637538 PUM3Q15397 648 aaKnown RBP20.42■□□□□ 0.86
CLCN2-220ENST00000637538 XAGE2Q96GT9 111 aa20.42■□□□□ 0.86
CLCN2-220ENST00000637538 PPP1R1BQ9UD71 204 aaPredicted RBP20.42■□□□□ 0.86
CLCN2-220ENST00000637538 GRAPQ13588 217 aa20.41■□□□□ 0.86
CLCN2-220ENST00000637538 GRAPLQ8TC17 118 aaPredicted RBP20.41■□□□□ 0.86
CLCN2-220ENST00000637538 MINPP1Q9UNW1 487 aa20.41■□□□□ 0.86
CLCN2-220ENST00000637538 TRIM6-TRIM34B2RNG4 842 aa20.4■□□□□ 0.86
CLCN2-220ENST00000637538 HELBQ8NG08 1087 aaPredicted RBP20.4■□□□□ 0.86
CLCN2-220ENST00000637538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.4■□□□□ 0.86
CLCN2-220ENST00000637538 LPIN2Q92539 896 aa20.4■□□□□ 0.86
CLCN2-220ENST00000637538 MAP4K4O95819 1239 aaPredicted RBP20.39■□□□□ 0.85
CLCN2-220ENST00000637538 POLD1P28340 1107 aa20.39■□□□□ 0.85
CLCN2-220ENST00000637538 CNTROBQ8N137 903 aa20.39■□□□□ 0.85
CLCN2-220ENST00000637538 RILPL2Q969X0 211 aa20.39■□□□□ 0.85
CLCN2-220ENST00000637538 HAUS7Q99871 368 aa20.39■□□□□ 0.85
CLCN2-220ENST00000637538 BOLA2Q9H3K6 86 aa20.39■□□□□ 0.85
CLCN2-220ENST00000637538 COL11A2P13942 1736 aaPredicted RBP20.39■□□□□ 0.85
CLCN2-220ENST00000637538 TAF5LO75529 589 aa20.38■□□□□ 0.85
CLCN2-220ENST00000637538 CHMLP26374 656 aa20.37■□□□□ 0.85
CLCN2-220ENST00000637538 RPGRQ92834 1020 aaKnown RBP20.37■□□□□ 0.85
CLCN2-220ENST00000637538 EVI5LQ96CN4 794 aa20.37■□□□□ 0.85
CLCN2-220ENST00000637538 ZNF512BQ96KM6 892 aaPredicted RBP20.37■□□□□ 0.85
CLCN2-220ENST00000637538 CRAMP1Q96RY5 1269 aa20.37■□□□□ 0.85
CLCN2-220ENST00000637538 RBM17Q96I25 401 aaKnown RBP20.37■□□□□ 0.85
CLCN2-220ENST00000637538 LRRC37AA6NMS7 1700 aa20.36■□□□□ 0.85
CLCN2-220ENST00000637538 SNAP23O00161 211 aa20.36■□□□□ 0.85
CLCN2-220ENST00000637538 SLC5A1P13866 664 aa20.36■□□□□ 0.85
CLCN2-220ENST00000637538 AKAP11Q9UKA4 1901 aa20.35■□□□□ 0.85
CLCN2-220ENST00000637538 SRGNP10124 158 aa20.35■□□□□ 0.85
CLCN2-220ENST00000637538 UBE4AQ14139 1066 aa20.35■□□□□ 0.85
CLCN2-220ENST00000637538 CCDC158Q5M9N0 1113 aa20.35■□□□□ 0.85
CLCN2-220ENST00000637538 PDE6BP35913 854 aa20.34■□□□□ 0.85
CLCN2-220ENST00000637538 CASC1Q6TDU7 716 aa20.34■□□□□ 0.85
CLCN2-220ENST00000637538 ANKRD2Q9GZV1 360 aa20.34■□□□□ 0.85
CLCN2-220ENST00000637538 RFX7Q2KHR2 1363 aa20.34■□□□□ 0.85
CLCN2-220ENST00000637538 IFIT1P09914 478 aaKnown RBP20.33■□□□□ 0.85
CLCN2-220ENST00000637538 ARID4AP29374 1257 aaPredicted RBP20.33■□□□□ 0.85
CLCN2-220ENST00000637538 TTC39AQ5SRH9 613 aa20.33■□□□□ 0.85
CLCN2-220ENST00000637538 GORABQ5T7V8 394 aa20.33■□□□□ 0.85
CLCN2-220ENST00000637538 CCDC102BQ68D86 513 aa20.33■□□□□ 0.85
CLCN2-220ENST00000637538 EDC3Q96F86 508 aaKnown RBP20.33■□□□□ 0.85
CLCN2-220ENST00000637538 BBOX1O75936 387 aa20.32■□□□□ 0.84
CLCN2-220ENST00000637538 NPR1P16066 1061 aa20.32■□□□□ 0.84
CLCN2-220ENST00000637538 MFAP1P55081 439 aaKnown RBP20.32■□□□□ 0.84
CLCN2-220ENST00000637538 SCARF1Q14162 830 aa20.32■□□□□ 0.84
CLCN2-220ENST00000637538 C10orf71Q711Q0 1435 aa20.32■□□□□ 0.84
CLCN2-220ENST00000637538 ESYT1Q9BSJ8 1104 aa20.32■□□□□ 0.84
CLCN2-220ENST00000637538 NDUFB9Q9Y6M9 179 aa20.32■□□□□ 0.84
CLCN2-220ENST00000637538 IRS2Q9Y4H2 1338 aa20.32■□□□□ 0.84
CLCN2-220ENST00000637538 LTBP1Q14766 1721 aa20.32■□□□□ 0.84
CLCN2-220ENST00000637538 WTIPA6NIX2 430 aaPredicted RBP20.32■□□□□ 0.84
CLCN2-220ENST00000637538 EIF5BO60841 1220 aaKnown RBP20.32■□□□□ 0.84
CLCN2-220ENST00000637538 PHKA1P46020 1223 aa20.32■□□□□ 0.84
CLCN2-220ENST00000637538 SLC51AQ86UW1 340 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms