RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 CNTNAP4Q9C0A0 1308 aa20.38■□□□□ 0.85
CHRNA7-227ENST00000637350 CHGBP05060 677 aa20.38■□□□□ 0.85
CHRNA7-227ENST00000637350 CSF1RP07333 972 aa20.38■□□□□ 0.85
CHRNA7-227ENST00000637350 KCNQ4P56696 695 aa20.38■□□□□ 0.85
CHRNA7-227ENST00000637350 ZNF445P59923 1031 aa20.38■□□□□ 0.85
CHRNA7-227ENST00000637350 CCDC57Q2TAC2 916 aa20.38■□□□□ 0.85
CHRNA7-227ENST00000637350 ZNF589Q86UQ0 364 aaPredicted RBP20.38■□□□□ 0.85
CHRNA7-227ENST00000637350 TAF6LQ9Y6J9 622 aa20.38■□□□□ 0.85
CHRNA7-227ENST00000637350 LAMA4Q16363 1823 aa20.37■□□□□ 0.85
CHRNA7-227ENST00000637350 SYNE4Q8N205 404 aa20.37■□□□□ 0.85
CHRNA7-227ENST00000637350 LIMCH1Q9UPQ0 1083 aa20.37■□□□□ 0.85
CHRNA7-227ENST00000637350 ST3GAL1Q11201 340 aa20.37■□□□□ 0.85
CHRNA7-227ENST00000637350 CREB3L3Q68CJ9 461 aa20.37■□□□□ 0.85
CHRNA7-227ENST00000637350 ATG9AQ7Z3C6 839 aa20.37■□□□□ 0.85
CHRNA7-227ENST00000637350 MAP4K1Q92918 833 aa20.37■□□□□ 0.85
CHRNA7-227ENST00000637350 TMEM63CQ9P1W3 806 aa20.37■□□□□ 0.85
CHRNA7-227ENST00000637350 IL15P40933 162 aaPredicted RBP20.36■□□□□ 0.85
CHRNA7-227ENST00000637350 ZSWIM6Q9HCJ5 1215 aa20.36■□□□□ 0.85
CHRNA7-227ENST00000637350 MYH3P11055 1940 aa20.36■□□□□ 0.85
CHRNA7-227ENST00000637350 EYA2O00167 538 aa20.35■□□□□ 0.85
CHRNA7-227ENST00000637350 IRS4O14654 1257 aaPredicted RBP20.35■□□□□ 0.85
CHRNA7-227ENST00000637350 CIAO1O76071 339 aa20.35■□□□□ 0.85
CHRNA7-227ENST00000637350 DBNDD2Q9BQY9 259 aa20.35■□□□□ 0.85
CHRNA7-227ENST00000637350 HIP1O00291 1037 aa20.35■□□□□ 0.85
CHRNA7-227ENST00000637350 RC3H1Q5TC82 1133 aaKnown RBP20.35■□□□□ 0.85
CHRNA7-227ENST00000637350 ZNF594Q96JF6 807 aaPredicted RBP20.35■□□□□ 0.85
CHRNA7-227ENST00000637350 GDPD2Q9HCC8 539 aa20.35■□□□□ 0.85
CHRNA7-227ENST00000637350 CCNL1Q9UK58 526 aaPredicted RBP20.35■□□□□ 0.85
CHRNA7-227ENST00000637350 ZNF652Q9Y2D9 606 aa20.35■□□□□ 0.85
CHRNA7-227ENST00000637350 SLC27A2O14975 620 aa20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 IFIT5Q13325 482 aaKnown RBP20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 PARP10Q53GL7 1025 aa20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 PDRG1Q9NUG6 133 aa20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 FBXO3Q9UK99 471 aa20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 ZNF609O15014 1411 aa20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 LY75O60449 1722 aa20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 ATP5JP18859 108 aa20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 CTSWP56202 376 aa20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 VPS53Q5VIR6 699 aa20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 TTLL11Q8NHH1 800 aa20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 TM6SF1Q9BZW5 370 aa20.34■□□□□ 0.85
CHRNA7-227ENST00000637350 PDE8AO60658 829 aa20.33■□□□□ 0.85
CHRNA7-227ENST00000637350 SUSD4Q5VX71 490 aa20.33■□□□□ 0.85
CHRNA7-227ENST00000637350 CLEC4GQ6UXB4 293 aa20.33■□□□□ 0.85
CHRNA7-227ENST00000637350 CCDC83Q8IWF9 413 aa20.33■□□□□ 0.85
CHRNA7-227ENST00000637350 BCL11BQ9C0K0 894 aaPredicted RBP20.33■□□□□ 0.85
CHRNA7-227ENST00000637350 WDR33Q9C0J8 1336 aaKnown RBP20.33■□□□□ 0.85
CHRNA7-227ENST00000637350 BCORQ6W2J9 1755 aa20.33■□□□□ 0.85
CHRNA7-227ENST00000637350 LRRC24Q50LG9 513 aa20.33■□□□□ 0.84
CHRNA7-227ENST00000637350 CCDC85AQ96PX6 553 aaPredicted RBP20.33■□□□□ 0.84
CHRNA7-227ENST00000637350 UTP14AQ9BVJ6 771 aaKnown RBP20.33■□□□□ 0.84
CHRNA7-227ENST00000637350 GPR108Q9NPR9 543 aa20.33■□□□□ 0.84
CHRNA7-227ENST00000637350 NIP7Q9Y221 180 aaKnown RBP eCLIP20.33■□□□□ 0.84
CHRNA7-227ENST00000637350 CYP46A1Q9Y6A2 500 aa20.33■□□□□ 0.84
CHRNA7-227ENST00000637350 SH3TC1Q8TE82 1336 aa20.33■□□□□ 0.84
CHRNA7-227ENST00000637350 KCNJ4P48050 445 aa20.32■□□□□ 0.84
CHRNA7-227ENST00000637350 AK7Q96M32 723 aa20.32■□□□□ 0.84
CHRNA7-227ENST00000637350 NASPP49321 788 aaPredicted RBP20.31■□□□□ 0.84
CHRNA7-227ENST00000637350 TAF7LQ5H9L4 462 aa20.31■□□□□ 0.84
CHRNA7-227ENST00000637350 GADD45BO75293 160 aaPredicted RBP20.31■□□□□ 0.84
CHRNA7-227ENST00000637350 RPS6KA4O75676 772 aa20.31■□□□□ 0.84
CHRNA7-227ENST00000637350 ME3Q16798 604 aa20.31■□□□□ 0.84
CHRNA7-227ENST00000637350 TCEANC2Q96MN5 208 aa20.31■□□□□ 0.84
CHRNA7-227ENST00000637350 DNAJC2Q99543 621 aaKnown RBP20.31■□□□□ 0.84
CHRNA7-227ENST00000637350 PUS3Q9BZE2 481 aaKnown RBP20.31■□□□□ 0.84
CHRNA7-227ENST00000637350 RGL2O15211 777 aa20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 SYT1P21579 422 aa20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 ITGA6P23229 1130 aa20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 KRT27Q7Z3Y8 459 aa20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 RBSNQ9H1K0 784 aa20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 GREM2Q9H772 168 aa20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 TAF1LQ8IZX4 1826 aa20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 EP400Q96L91 3159 aa20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 ZKSCAN1P17029 563 aaPredicted RBP20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 CCDC129Q6ZRS4 1044 aa20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 FAM196AQ6ZSG2 479 aa20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 SEC62Q99442 399 aaKnown RBP20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 TPCN1Q9ULQ1 816 aa20.3■□□□□ 0.84
CHRNA7-227ENST00000637350 BRWD3Q6RI45 1802 aa20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 SYCE3A1L190 88 aa20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 ANKRD18BA2A2Z9 1011 aa20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 TAF5LO75529 589 aa20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 DDX46Q7L014 1031 aaKnown RBP20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 NECAB1Q8N987 351 aa20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 SMC3Q9UQE7 1217 aa20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 FAM177BA6PVY3 158 aa20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 GNPATO15228 680 aa20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 STX6O43752 255 aa20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 ZSCAN22P10073 491 aaPredicted RBP20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 ZNF772Q68DY9 489 aaPredicted RBP20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 CEP126Q9P2H0 1117 aa20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.29■□□□□ 0.84
CHRNA7-227ENST00000637350 HSP90B1P14625 803 aaKnown RBP20.28■□□□□ 0.84
CHRNA7-227ENST00000637350 GJB2P29033 226 aa20.28■□□□□ 0.84
CHRNA7-227ENST00000637350 HAUS7Q99871 368 aa20.28■□□□□ 0.84
CHRNA7-227ENST00000637350 NTSR2O95665 410 aa20.27■□□□□ 0.84
CHRNA7-227ENST00000637350 MBD3O95983 291 aa20.27■□□□□ 0.84
CHRNA7-227ENST00000637350 SLFNL1Q499Z3 407 aa20.27■□□□□ 0.84
CHRNA7-227ENST00000637350 USP48Q86UV5 1035 aa20.27■□□□□ 0.84
CHRNA7-227ENST00000637350 NEUROD6Q96NK8 337 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms