RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 ATL3Q6DD88 541 aa9.06□□□□□ -0.96
SCN8A-212ENST00000636945 FCHSD1Q86WN1 690 aa9.06□□□□□ -0.96
SCN8A-212ENST00000636945 MRC1P22897 1456 aa9.06□□□□□ -0.96
SCN8A-212ENST00000636945 ARHGAP23Q9P227 1491 aa9.06□□□□□ -0.96
SCN8A-212ENST00000636945 DTNBO60941 627 aa9.06□□□□□ -0.96
SCN8A-212ENST00000636945 PSMA5P28066 241 aa9.06□□□□□ -0.96
SCN8A-212ENST00000636945 LRRFIP1Q32MZ4 808 aaKnown RBP9.06□□□□□ -0.96
SCN8A-212ENST00000636945 USPL1Q5W0Q7 1092 aa9.06□□□□□ -0.96
SCN8A-212ENST00000636945 PPP1R42Q7Z4L9 355 aa9.06□□□□□ -0.96
SCN8A-212ENST00000636945 SMARCC2Q8TAQ2 1214 aa9.06□□□□□ -0.96
SCN8A-212ENST00000636945 BABAM1Q9NWV8 329 aa9.06□□□□□ -0.96
SCN8A-212ENST00000636945 RBM8AQ9Y5S9 174 aaKnown RBP9.06□□□□□ -0.96
SCN8A-212ENST00000636945 ZNF335Q9H4Z2 1342 aaPredicted RBP9.05□□□□□ -0.96
SCN8A-212ENST00000636945 UBR1Q8IWV7 1749 aa9.05□□□□□ -0.96
SCN8A-212ENST00000636945 GOLGA6L4A6NEF3 574 aa9.05□□□□□ -0.96
SCN8A-212ENST00000636945 OAS2P29728 719 aaKnown RBP9.05□□□□□ -0.96
SCN8A-212ENST00000636945 CCDC30Q5VVM6 783 aa9.05□□□□□ -0.96
SCN8A-212ENST00000636945 BRMS1Q9HCU9 246 aa9.05□□□□□ -0.96
SCN8A-212ENST00000636945 CFAP45Q9UL16 551 aa9.05□□□□□ -0.96
SCN8A-212ENST00000636945 SLIT1O75093 1534 aa9.05□□□□□ -0.96
SCN8A-212ENST00000636945 SMC1AQ14683 1233 aaKnown RBP9.05□□□□□ -0.96
SCN8A-212ENST00000636945 GPR161Q8N6U8 529 aaKnown RBP9.05□□□□□ -0.96
SCN8A-212ENST00000636945 WASLO00401 505 aaPredicted RBP9.04□□□□□ -0.96
SCN8A-212ENST00000636945 TRIM66O15016 1216 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 CCP110O43303 1012 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 UBTFL1P0CB47 393 aaPredicted RBP9.04□□□□□ -0.96
SCN8A-212ENST00000636945 MAP3K9P80192 1104 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 NCAPHQ15003 741 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 ICE2Q659A1 982 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 BICD2Q8TD16 824 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 UBXN4Q92575 508 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 ZKSCAN1P17029 563 aaPredicted RBP9.04□□□□□ -0.96
SCN8A-212ENST00000636945 FAM160A1Q05DH4 1040 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 GPS2Q13227 327 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 HSD3B7Q9H2F3 369 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 SENP3Q9H4L4 574 aaPredicted RBP9.04□□□□□ -0.96
SCN8A-212ENST00000636945 TSPYL4Q9UJ04 414 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 SURF6O75683 361 aaKnown RBP9.04□□□□□ -0.96
SCN8A-212ENST00000636945 SEC31AO94979 1220 aaKnown RBP9.04□□□□□ -0.96
SCN8A-212ENST00000636945 IFIT2P09913 472 aaKnown RBP9.04□□□□□ -0.96
SCN8A-212ENST00000636945 HSP90AB4PQ58FF6 505 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 NAA16Q6N069 864 aaPredicted RBP9.04□□□□□ -0.96
SCN8A-212ENST00000636945 TMEM139Q8IV31 216 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 FMR1NBQ8N0W7 255 aaPredicted RBP9.04□□□□□ -0.96
SCN8A-212ENST00000636945 HNRNPLLQ8WVV9 542 aaKnown RBP9.04□□□□□ -0.96
SCN8A-212ENST00000636945 EVI5LQ96CN4 794 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 SIRT1Q96EB6 747 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 TRERF1Q96PN7 1200 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 STK31Q9BXU1 1019 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 ZCCHC17Q9NP64 241 aaKnown RBP9.04□□□□□ -0.96
SCN8A-212ENST00000636945 ADAM21Q9UKJ8 722 aa9.04□□□□□ -0.96
SCN8A-212ENST00000636945 ACTN2P35609 894 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 MTHFSDQ2M296 383 aaKnown RBP9.03□□□□□ -0.96
SCN8A-212ENST00000636945 CEP57L1Q8IYX8 460 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 CCDC191Q8NCU4 936 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 SLC26A8Q96RN1 970 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 CWC15Q9P013 229 aaKnown RBP9.03□□□□□ -0.96
SCN8A-212ENST00000636945 RRP15Q9Y3B9 282 aaKnown RBP9.03□□□□□ -0.96
SCN8A-212ENST00000636945 NWD1Q149M9 1564 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 NCAPD2Q15021 1401 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 SOX12O15370 315 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 CPP00450 1065 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 GUCY2CP25092 1073 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 AOPEPQ8N6M6 819 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 XPO4Q9C0E2 1151 aaKnown RBP9.03□□□□□ -0.96
SCN8A-212ENST00000636945 MIS18AQ9NYP9 233 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 HMG20BQ9P0W2 317 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 H3BQF6 201 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 WAPLQ7Z5K2 1190 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 CCAR1Q8IX12 1150 aaKnown RBP9.03□□□□□ -0.96
SCN8A-212ENST00000636945 LLPHQ9BRT6 129 aaKnown RBP9.03□□□□□ -0.96
SCN8A-212ENST00000636945 ECHDC1Q9NTX5 307 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 TAF6LQ9Y6J9 622 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 MAP3K19Q56UN5 1328 aa9.03□□□□□ -0.96
SCN8A-212ENST00000636945 SBNO1A3KN83 1393 aa9.02□□□□□ -0.96
SCN8A-212ENST00000636945 POLR3GO15318 223 aaPredicted RBP9.02□□□□□ -0.96
SCN8A-212ENST00000636945 USP5P45974 858 aa9.02□□□□□ -0.96
SCN8A-212ENST00000636945 RABGGTAQ92696 567 aa9.02□□□□□ -0.96
SCN8A-212ENST00000636945 MPHOSPH8Q99549 860 aa9.02□□□□□ -0.96
SCN8A-212ENST00000636945 MRFAP1Q9Y605 127 aa9.02□□□□□ -0.96
SCN8A-212ENST00000636945 SALL1Q9NSC2 1324 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 A0A1W2PQ27 194 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 A0A1W2PQ64 194 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 A0A1W2PQD8 194 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 VWA3AA6NCI4 1184 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 BECN2A8MW95 431 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 HIP1O00291 1037 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 NPHP1O15259 732 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 MAGEA9P43362 315 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 BLOC1S2Q6QNY1 142 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 BRF1Q92994 677 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 KIFC2Q96AC6 838 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 NAT10Q9H0A0 1025 aaKnown RBP9.02□□□□□ -0.97
SCN8A-212ENST00000636945 SFPQP23246 707 aaKnown RBP eCLIP9.02□□□□□ -0.97
SCN8A-212ENST00000636945 PSEN1P49768 467 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 ILDR1Q86SU0 546 aaPredicted RBP9.02□□□□□ -0.97
SCN8A-212ENST00000636945 CHMP4AQ9BY43 222 aa9.02□□□□□ -0.97
SCN8A-212ENST00000636945 KDM3BQ7LBC6 1761 aa9.01□□□□□ -0.97
SCN8A-212ENST00000636945 CCDC151A5D8V7 595 aa9.01□□□□□ -0.97
SCN8A-212ENST00000636945 IKBKBO14920 756 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms