RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 IL17RAQ96F46 866 aa19.17■□□□□ 0.66
CACNA1A-231ENST00000636816 PAG1Q9NWQ8 432 aa19.17■□□□□ 0.66
CACNA1A-231ENST00000636816 SNX14Q9Y5W7 946 aa19.17■□□□□ 0.66
CACNA1A-231ENST00000636816 DDIT3P35638 169 aa19.16■□□□□ 0.66
CACNA1A-231ENST00000636816 SCARF1Q14162 830 aa19.16■□□□□ 0.66
CACNA1A-231ENST00000636816 GORABQ5T7V8 394 aa19.16■□□□□ 0.66
CACNA1A-231ENST00000636816 SEC62Q99442 399 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-231ENST00000636816 SNRKQ9NRH2 765 aa19.16■□□□□ 0.66
CACNA1A-231ENST00000636816 SCN7AQ01118 1682 aa19.16■□□□□ 0.66
CACNA1A-231ENST00000636816 EP400Q96L91 3159 aa19.16■□□□□ 0.66
CACNA1A-231ENST00000636816 COL4A1P02462 1669 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 SPEF2Q9C093 1822 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 ST18O60284 1047 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 PHF14O94880 888 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 KBTBD3Q8NAB2 608 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 UPF3BQ9BZI7 483 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 C4BP0C0L5 1744 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 CCDC171Q6TFL3 1326 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 LAMB2P55268 1798 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 TRIM37O94972 964 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 PDE8BO95263 885 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 CCDC158Q5M9N0 1113 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 TTC39AQ5SRH9 613 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 FAM196AQ6ZSG2 479 aa19.15■□□□□ 0.66
CACNA1A-231ENST00000636816 TAF1P21675 1872 aa19.14■□□□□ 0.66
CACNA1A-231ENST00000636816 SNAP23O00161 211 aa19.14■□□□□ 0.65
CACNA1A-231ENST00000636816 ZPR1O75312 459 aa19.14■□□□□ 0.65
CACNA1A-231ENST00000636816 FRAT2O75474 233 aaPredicted RBP19.14■□□□□ 0.65
CACNA1A-231ENST00000636816 CCDC152Q4G0S7 254 aa19.14■□□□□ 0.65
CACNA1A-231ENST00000636816 MED23Q9ULK4 1368 aa19.14■□□□□ 0.65
CACNA1A-231ENST00000636816 HSP90AA1P07900 732 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 FKBP4Q02790 459 aaKnown RBP eCLIP19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 PRPF40BQ6NWY9 871 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 CCDC129Q6ZRS4 1044 aa19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 CHMP5Q9NZZ3 219 aa19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 CASZ1Q86V15 1759 aa19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 TAF5LO75529 589 aa19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 NECTIN1Q15223 517 aa19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 PI16Q6UXB8 463 aa19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 CCDC24Q8N4L8 307 aa19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 MAP4K1Q92918 833 aa19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 RBM8AQ9Y5S9 174 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 LRP5O75197 1615 aa19.13■□□□□ 0.65
CACNA1A-231ENST00000636816 MPHOSPH8Q99549 860 aa19.12■□□□□ 0.65
CACNA1A-231ENST00000636816 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.12■□□□□ 0.65
CACNA1A-231ENST00000636816 SETDB2Q96T68 719 aa19.12■□□□□ 0.65
CACNA1A-231ENST00000636816 C4AP0C0L4 1744 aa19.12■□□□□ 0.65
CACNA1A-231ENST00000636816 ZAP70P43403 619 aa19.11■□□□□ 0.65
CACNA1A-231ENST00000636816 ADCK5Q3MIX3 580 aa19.11■□□□□ 0.65
CACNA1A-231ENST00000636816 TRAPPC3LQ5T215 181 aa19.11■□□□□ 0.65
CACNA1A-231ENST00000636816 NOL8Q76FK4 1167 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-231ENST00000636816 MROH5Q6ZUA9 1318 aa19.11■□□□□ 0.65
CACNA1A-231ENST00000636816 ABCC12Q96J65 1359 aa19.11■□□□□ 0.65
CACNA1A-231ENST00000636816 AKAP11Q9UKA4 1901 aa19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 RGL2O15211 777 aa19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 HSP90B1P14625 803 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 CPA1P15085 419 aa19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 FGFR2P21802 821 aa19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 GTF2E1P29083 439 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 RFC4P35249 363 aa19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 RFX7Q2KHR2 1363 aa19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 RTL9Q8NET4 1388 aa19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 MCMDC2Q4G0Z9 681 aa19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 CREB3L3Q68CJ9 461 aa19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 KCNB2Q92953 911 aa19.1■□□□□ 0.65
CACNA1A-231ENST00000636816 IGHMBP2P38935 993 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-231ENST00000636816 MCAMP43121 646 aa19.09■□□□□ 0.65
CACNA1A-231ENST00000636816 PHKA1P46020 1223 aa19.09■□□□□ 0.65
CACNA1A-231ENST00000636816 KCNJ4P48050 445 aa19.09■□□□□ 0.65
CACNA1A-231ENST00000636816 SLC10A5Q5PT55 438 aa19.09■□□□□ 0.65
CACNA1A-231ENST00000636816 NBPF5PQ86XG9 351 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-231ENST00000636816 TAF6LQ9Y6J9 622 aa19.09■□□□□ 0.65
CACNA1A-231ENST00000636816 SF3B3Q15393 1217 aaKnown RBP19.08■□□□□ 0.65
CACNA1A-231ENST00000636816 PUM3Q15397 648 aaKnown RBP19.08■□□□□ 0.65
CACNA1A-231ENST00000636816 TMX3Q96JJ7 454 aa19.08■□□□□ 0.65
CACNA1A-231ENST00000636816 COL24A1Q17RW2 1714 aa19.08■□□□□ 0.64
CACNA1A-231ENST00000636816 SLC27A2O14975 620 aa19.08■□□□□ 0.64
CACNA1A-231ENST00000636816 RBM6P78332 1123 aaKnown RBP19.08■□□□□ 0.64
CACNA1A-231ENST00000636816 COL9A3Q14050 684 aaPredicted RBP19.08■□□□□ 0.64
CACNA1A-231ENST00000636816 CCDC102BQ68D86 513 aa19.08■□□□□ 0.64
CACNA1A-231ENST00000636816 ZGPATQ8N5A5 531 aaKnown RBP19.08■□□□□ 0.64
CACNA1A-231ENST00000636816 LPIN2Q92539 896 aa19.08■□□□□ 0.64
CACNA1A-231ENST00000636816 RNF113AO15541 343 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-231ENST00000636816 ZMYM1Q5SVZ6 1142 aa19.07■□□□□ 0.64
CACNA1A-231ENST00000636816 PROM2Q8N271 834 aa19.07■□□□□ 0.64
CACNA1A-231ENST00000636816 UBR3Q6ZT12 1888 aa19.07■□□□□ 0.64
CACNA1A-231ENST00000636816 MYO5AQ9Y4I1 1855 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-231ENST00000636816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-231ENST00000636816 WTIPA6NIX2 430 aaPredicted RBP19.06■□□□□ 0.64
CACNA1A-231ENST00000636816 CASTP20810 708 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-231ENST00000636816 CHRNDQ07001 517 aa19.06■□□□□ 0.64
CACNA1A-231ENST00000636816 ZNF772Q68DY9 489 aaPredicted RBP19.06■□□□□ 0.64
CACNA1A-231ENST00000636816 JAKMIP1Q96N16 626 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-231ENST00000636816 TTC14Q96N46 770 aa19.06■□□□□ 0.64
CACNA1A-231ENST00000636816 LARP6Q9BRS8 491 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-231ENST00000636816 NYXQ9GZU5 481 aa19.06■□□□□ 0.64
CACNA1A-231ENST00000636816 SSFA2P28290 1259 aa19.05■□□□□ 0.64
CACNA1A-231ENST00000636816 VPS53Q5VIR6 699 aa19.05■□□□□ 0.64
CACNA1A-231ENST00000636816 TPTE2Q6XPS3 522 aa19.05■□□□□ 0.64
CACNA1A-231ENST00000636816 CELF1Q92879 486 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms