RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 RFC4P35249 363 aa8.52□□□□□ -1.05
UPF3B-205ENST00000636792 NEXNQ0ZGT2 675 aa8.52□□□□□ -1.05
UPF3B-205ENST00000636792 FKBP5Q13451 457 aaPredicted RBP8.52□□□□□ -1.05
UPF3B-205ENST00000636792 PDE3AQ14432 1141 aa8.52□□□□□ -1.05
UPF3B-205ENST00000636792 ZNF827Q17R98 1081 aa8.52□□□□□ -1.05
UPF3B-205ENST00000636792 PARP10Q53GL7 1025 aa8.52□□□□□ -1.05
UPF3B-205ENST00000636792 KSR2Q6VAB6 950 aa8.52□□□□□ -1.05
UPF3B-205ENST00000636792 ATF7IPQ6VMQ6 1270 aa8.52□□□□□ -1.05
UPF3B-205ENST00000636792 FAM198AQ9UFP1 575 aa8.52□□□□□ -1.05
UPF3B-205ENST00000636792 CARMIL3Q8ND23 1372 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 CAMTA2O94983 1202 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 HSP90B1P14625 803 aaKnown RBP8.51□□□□□ -1.05
UPF3B-205ENST00000636792 CCT4P50991 539 aaKnown RBP8.51□□□□□ -1.05
UPF3B-205ENST00000636792 APLP1P51693 650 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 TRIM28Q13263 835 aaKnown RBP8.51□□□□□ -1.05
UPF3B-205ENST00000636792 AAMPQ13685 434 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 PROSER3Q2NL68 480 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 COPS6Q7L5N1 327 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 NLGN1Q8N2Q7 840 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 XAGE3Q8WTP9 111 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 DNAAF4Q8WXU2 420 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 TMUB1Q9BVT8 246 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 HDAC5Q9UQL6 1122 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 LRP5O75197 1615 aa8.51□□□□□ -1.05
UPF3B-205ENST00000636792 ALDH1L1O75891 902 aa8.5□□□□□ -1.05
UPF3B-205ENST00000636792 SLC4A3P48751 1232 aa8.5□□□□□ -1.05
UPF3B-205ENST00000636792 RRP1P56182 461 aaKnown RBP8.5□□□□□ -1.05
UPF3B-205ENST00000636792 CCDC191Q8NCU4 936 aa8.5□□□□□ -1.05
UPF3B-205ENST00000636792 LINS1Q8NG48 757 aa8.5□□□□□ -1.05
UPF3B-205ENST00000636792 ARHGEF1Q92888 912 aaKnown RBP8.5□□□□□ -1.05
UPF3B-205ENST00000636792 METTL22Q9BUU2 404 aaPredicted RBP8.5□□□□□ -1.05
UPF3B-205ENST00000636792 PHAXQ9H814 394 aaKnown RBP8.5□□□□□ -1.05
UPF3B-205ENST00000636792 DLEC1Q9Y238 1755 aa8.5□□□□□ -1.05
UPF3B-205ENST00000636792 PI4KAP2A4QPH2 592 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 BCAR3O75815 825 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 GYS1P13807 737 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 TRIM27P14373 513 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 KCNQ4P56696 695 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 TCIRG1Q13488 830 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 NUDT18Q6ZVK8 323 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 RIC3Q7Z5B4 369 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 SLF2Q8IX21 1173 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 FTSJ3Q8IY81 847 aaKnown RBP8.49□□□□□ -1.05
UPF3B-205ENST00000636792 DZIP1LQ8IYY4 767 aaKnown RBP8.49□□□□□ -1.05
UPF3B-205ENST00000636792 PI4KAP1Q8N8J0 262 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 NKX2-3Q8TAU0 364 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 ZNF775Q96BV0 537 aaPredicted RBP8.49□□□□□ -1.05
UPF3B-205ENST00000636792 BCL2L13Q9BXK5 485 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 NYXQ9GZU5 481 aa8.49□□□□□ -1.05
UPF3B-205ENST00000636792 NOB1Q9ULX3 412 aaKnown RBP8.49□□□□□ -1.05
UPF3B-205ENST00000636792 ZNF330Q9Y3S2 320 aaPredicted RBP8.49□□□□□ -1.05
UPF3B-205ENST00000636792 DDX60Q8IY21 1712 aaKnown RBP8.49□□□□□ -1.05
UPF3B-205ENST00000636792 COPS2P61201 443 aa8.48□□□□□ -1.05
UPF3B-205ENST00000636792 AIMP1Q12904 312 aaKnown RBP8.48□□□□□ -1.05
UPF3B-205ENST00000636792 USPL1Q5W0Q7 1092 aa8.48□□□□□ -1.05
UPF3B-205ENST00000636792 INTS3Q68E01 1043 aaKnown RBP8.48□□□□□ -1.05
UPF3B-205ENST00000636792 TTLL7Q6ZT98 887 aa8.48□□□□□ -1.05
UPF3B-205ENST00000636792 G2E3Q7L622 706 aa8.48□□□□□ -1.05
UPF3B-205ENST00000636792 PPP1R42Q7Z4L9 355 aa8.48□□□□□ -1.05
UPF3B-205ENST00000636792 COL23A1Q86Y22 540 aaPredicted RBP8.48□□□□□ -1.05
UPF3B-205ENST00000636792 ISCA1Q9BUE6 129 aa8.48□□□□□ -1.05
UPF3B-205ENST00000636792 SRCIN1Q9C0H9 1055 aa8.48□□□□□ -1.05
UPF3B-205ENST00000636792 MTFR1LQ9H019 292 aa8.48□□□□□ -1.05
UPF3B-205ENST00000636792 RBM27Q9P2N5 1060 aaKnown RBP8.48□□□□□ -1.05
UPF3B-205ENST00000636792 DDX19BQ9UMR2 479 aa8.48□□□□□ -1.05
UPF3B-205ENST00000636792 MAP3K2Q9Y2U5 619 aa8.48□□□□□ -1.05
UPF3B-205ENST00000636792 GRXCR2A6NFK2 248 aa8.47□□□□□ -1.05
UPF3B-205ENST00000636792 C3orf80F5H4A9 247 aa8.47□□□□□ -1.05
UPF3B-205ENST00000636792 ANXA1P04083 346 aa8.47□□□□□ -1.05
UPF3B-205ENST00000636792 PIP4K2AP48426 406 aaPredicted RBP8.47□□□□□ -1.05
UPF3B-205ENST00000636792 BEND3Q5T5X7 828 aa8.47□□□□□ -1.05
UPF3B-205ENST00000636792 ZNF34Q8IZ26 560 aa8.47□□□□□ -1.05
UPF3B-205ENST00000636792 FRAT1Q92837 279 aaPredicted RBP8.47□□□□□ -1.05
UPF3B-205ENST00000636792 ZBTB3Q9H5J0 574 aa8.47□□□□□ -1.05
UPF3B-205ENST00000636792 TBC1D2BQ9UPU7 963 aa8.47□□□□□ -1.05
UPF3B-205ENST00000636792 UTYO14607 1347 aa8.47□□□□□ -1.05
UPF3B-205ENST00000636792 CDHR2Q9BYE9 1310 aa8.47□□□□□ -1.05
UPF3B-205ENST00000636792 NEURL1BA8MQ27 555 aa8.46□□□□□ -1.06
UPF3B-205ENST00000636792 GNAI3P08754 354 aa8.46□□□□□ -1.06
UPF3B-205ENST00000636792 MVPQ14764 893 aaKnown RBP8.46□□□□□ -1.06
UPF3B-205ENST00000636792 AMIGO3Q86WK7 504 aa8.46□□□□□ -1.06
UPF3B-205ENST00000636792 SETDB2Q96T68 719 aa8.46□□□□□ -1.06
UPF3B-205ENST00000636792 PRR14Q9BWN1 585 aa8.46□□□□□ -1.06
UPF3B-205ENST00000636792 CWC25Q9NXE8 425 aaPredicted RBP8.46□□□□□ -1.06
UPF3B-205ENST00000636792 ANKRD31Q8N7Z5 1873 aa8.46□□□□□ -1.06
UPF3B-205ENST00000636792 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.06
UPF3B-205ENST00000636792 TCERG1O14776 1098 aaKnown RBP8.45□□□□□ -1.06
UPF3B-205ENST00000636792 PCCAP05165 728 aaPredicted RBP8.45□□□□□ -1.06
UPF3B-205ENST00000636792 TM4SF1P30408 202 aa8.45□□□□□ -1.06
UPF3B-205ENST00000636792 NLRP10Q86W26 655 aa8.45□□□□□ -1.06
UPF3B-205ENST00000636792 ZBTB38Q8NAP3 1195 aaPredicted RBP8.45□□□□□ -1.06
UPF3B-205ENST00000636792 NIP7Q9Y221 180 aaKnown RBP eCLIP8.45□□□□□ -1.06
UPF3B-205ENST00000636792 UBN2Q6ZU65 1347 aa8.45□□□□□ -1.06
UPF3B-205ENST00000636792 SH3TC1Q8TE82 1336 aa8.45□□□□□ -1.06
UPF3B-205ENST00000636792 BRCA1P38398 1863 aaKnown RBP8.45□□□□□ -1.06
UPF3B-205ENST00000636792 GRM8O00222 908 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 POLRMTO00411 1230 aaKnown RBP8.44□□□□□ -1.06
UPF3B-205ENST00000636792 NTSR2O95665 410 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 IGKV5-2P06315 115 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 POLD1P28340 1107 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms