RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 DOK7Q18PE1 504 aa19.14■□□□□ 0.65
CACNA1A-230ENST00000636768 DCAF8Q5TAQ9 597 aa19.14■□□□□ 0.65
CACNA1A-230ENST00000636768 LINS1Q8NG48 757 aa19.14■□□□□ 0.65
CACNA1A-230ENST00000636768 TTLL11Q8NHH1 800 aa19.14■□□□□ 0.65
CACNA1A-230ENST00000636768 ZC3H12CQ9C0D7 883 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-230ENST00000636768 H7C1W4 665 aa19.13■□□□□ 0.65
CACNA1A-230ENST00000636768 GREM2Q9H772 168 aa19.13■□□□□ 0.65
CACNA1A-230ENST00000636768 XDHP47989 1333 aa19.12■□□□□ 0.65
CACNA1A-230ENST00000636768 CNTNAP1P78357 1384 aa19.11■□□□□ 0.65
CACNA1A-230ENST00000636768 F6X3S4 739 aa19.11■□□□□ 0.65
CACNA1A-230ENST00000636768 PSMD14O00487 310 aa19.11■□□□□ 0.65
CACNA1A-230ENST00000636768 CNOT7Q9UIV1 285 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-230ENST00000636768 RTL9Q8NET4 1388 aa19.1■□□□□ 0.65
CACNA1A-230ENST00000636768 ZNF521Q96K83 1311 aa19.1■□□□□ 0.65
CACNA1A-230ENST00000636768 H7C1D1 291 aa19.1■□□□□ 0.65
CACNA1A-230ENST00000636768 MICALL2Q8IY33 904 aa19.1■□□□□ 0.65
CACNA1A-230ENST00000636768 BSDC1Q9NW68 430 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-230ENST00000636768 ZBTB12Q9Y330 459 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-230ENST00000636768 ATP2B4P23634 1241 aa19.09■□□□□ 0.65
CACNA1A-230ENST00000636768 IGHMBP2P38935 993 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-230ENST00000636768 PLA2G12BQ9BX93 195 aa19.09■□□□□ 0.65
CACNA1A-230ENST00000636768 ABT1Q9ULW3 272 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-230ENST00000636768 SHTN1A0MZ66 631 aa19.08■□□□□ 0.64
CACNA1A-230ENST00000636768 RPS12P25398 132 aaKnown RBP19.08■□□□□ 0.64
CACNA1A-230ENST00000636768 CASP7P55210 303 aa19.08■□□□□ 0.64
CACNA1A-230ENST00000636768 FAM161AQ3B820 660 aa19.08■□□□□ 0.64
CACNA1A-230ENST00000636768 TRPM4Q8TD43 1214 aa19.08■□□□□ 0.64
CACNA1A-230ENST00000636768 DPF2Q92785 391 aa19.08■□□□□ 0.64
CACNA1A-230ENST00000636768 KCNQ5Q9NR82 932 aa19.08■□□□□ 0.64
CACNA1A-230ENST00000636768 TRAF5O00463 557 aa19.07■□□□□ 0.64
CACNA1A-230ENST00000636768 HSPA1AP0DMV8 641 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-230ENST00000636768 HSPA1BP0DMV9 641 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-230ENST00000636768 ITGA6P23229 1130 aa19.07■□□□□ 0.64
CACNA1A-230ENST00000636768 FMR1Q06787 632 aaKnown RBP eCLIP19.07■□□□□ 0.64
CACNA1A-230ENST00000636768 BEND3Q5T5X7 828 aa19.07■□□□□ 0.64
CACNA1A-230ENST00000636768 MINPP1Q9UNW1 487 aa19.07■□□□□ 0.64
CACNA1A-230ENST00000636768 ZC3H15Q8WU90 426 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-230ENST00000636768 MPHOSPH8Q99549 860 aa19.06■□□□□ 0.64
CACNA1A-230ENST00000636768 E9PSI1 815 aa19.05■□□□□ 0.64
CACNA1A-230ENST00000636768 VEGFBP49765 207 aa19.05■□□□□ 0.64
CACNA1A-230ENST00000636768 HIRAP54198 1017 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-230ENST00000636768 SLC4A10Q6U841 1118 aa19.05■□□□□ 0.64
CACNA1A-230ENST00000636768 GLIS2Q9BZE0 524 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-230ENST00000636768 CHMP3Q9Y3E7 222 aa19.05■□□□□ 0.64
CACNA1A-230ENST00000636768 RASSF10A6NK89 507 aa19.04■□□□□ 0.64
CACNA1A-230ENST00000636768 CSF1RP07333 972 aa19.04■□□□□ 0.64
CACNA1A-230ENST00000636768 VIL1P09327 827 aaKnown RBP19.04■□□□□ 0.64
CACNA1A-230ENST00000636768 CCT4P50991 539 aaKnown RBP19.04■□□□□ 0.64
CACNA1A-230ENST00000636768 DEFB115Q30KQ5 88 aa19.04■□□□□ 0.64
CACNA1A-230ENST00000636768 TBC1D10BQ4KMP7 808 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-230ENST00000636768 SAMD7Q7Z3H4 446 aa19.04■□□□□ 0.64
CACNA1A-230ENST00000636768 PGAP2Q9UHJ9 254 aa19.04■□□□□ 0.64
CACNA1A-230ENST00000636768 MED23Q9ULK4 1368 aa19.04■□□□□ 0.64
CACNA1A-230ENST00000636768 ANKRD18BA2A2Z9 1011 aa19.03■□□□□ 0.64
CACNA1A-230ENST00000636768 RBM26Q5T8P6 1007 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-230ENST00000636768 IFFO2Q5TF58 517 aa19.03■□□□□ 0.64
CACNA1A-230ENST00000636768 PAXIP1Q6ZW49 1069 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-230ENST00000636768 C9orf78Q9NZ63 289 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-230ENST00000636768 WTIPA6NIX2 430 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-230ENST00000636768 GRM8O00222 908 aa19.02■□□□□ 0.64
CACNA1A-230ENST00000636768 ALDH1L1O75891 902 aa19.02■□□□□ 0.64
CACNA1A-230ENST00000636768 CELF2O95319 508 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-230ENST00000636768 IFIT5Q13325 482 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-230ENST00000636768 RSBN1LQ6PCB5 846 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-230ENST00000636768 CDC37L1Q7L3B6 337 aa19.02■□□□□ 0.64
CACNA1A-230ENST00000636768 PODNQ7Z5L7 613 aa19.02■□□□□ 0.64
CACNA1A-230ENST00000636768 SRCIN1Q9C0H9 1055 aa19.02■□□□□ 0.64
CACNA1A-230ENST00000636768 ANKRD2Q9GZV1 360 aa19.02■□□□□ 0.64
CACNA1A-230ENST00000636768 LEMD3Q9Y2U8 911 aa19.02■□□□□ 0.64
CACNA1A-230ENST00000636768 USP17L3A6NCW0 530 aa19.01■□□□□ 0.63
CACNA1A-230ENST00000636768 USP17L4A6NCW7 530 aa19.01■□□□□ 0.63
CACNA1A-230ENST00000636768 KCNJ4P48050 445 aa19.01■□□□□ 0.63
CACNA1A-230ENST00000636768 KIF4BQ2VIQ3 1234 aa19.01■□□□□ 0.63
CACNA1A-230ENST00000636768 CST9Q5W186 159 aa19.01■□□□□ 0.63
CACNA1A-230ENST00000636768 USP17L1Q7RTZ2 530 aa19.01■□□□□ 0.63
CACNA1A-230ENST00000636768 ZNF408Q9H9D4 720 aa19.01■□□□□ 0.63
CACNA1A-230ENST00000636768 CCER2I3L3R5 266 aa19■□□□□ 0.63
CACNA1A-230ENST00000636768 EGFRP00533 1210 aa19■□□□□ 0.63
CACNA1A-230ENST00000636768 FOXO4P98177 505 aa19■□□□□ 0.63
CACNA1A-230ENST00000636768 AGBL3Q8NEM8 1001 aa19■□□□□ 0.63
CACNA1A-230ENST00000636768 MYH3P11055 1940 aa19■□□□□ 0.63
CACNA1A-230ENST00000636768 ZNF804BA4D1E1 1349 aa19■□□□□ 0.63
CACNA1A-230ENST00000636768 CACNA1FO60840 1977 aa18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 CHRNDQ07001 517 aa18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 SLFN5Q08AF3 891 aa18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 GRM1Q13255 1194 aa18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 TAF7LQ5H9L4 462 aa18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 LMBR1LQ6UX01 489 aa18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 USP48Q86UV5 1035 aa18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 MRPL50Q8N5N7 158 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 FBXW7Q969H0 707 aa18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 DCPSQ96C86 337 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 TLL2Q9Y6L7 1015 aa18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 PCNTO95613 3336 aa18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 WDR33Q9C0J8 1336 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-230ENST00000636768 ECE1P42892 770 aa18.98■□□□□ 0.63
CACNA1A-230ENST00000636768 CCDC57Q2TAC2 916 aa18.98■□□□□ 0.63
CACNA1A-230ENST00000636768 EPHA10Q5JZY3 1008 aa18.98■□□□□ 0.63
CACNA1A-230ENST00000636768 COL13A1Q5TAT6 717 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-230ENST00000636768 KRT26Q7Z3Y9 468 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms