RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 USP17L7P0C7H9 530 aa9.66□□□□□ -0.86
SMARCA2-240ENST00000635392 HOXD8P13378 290 aaPredicted RBP9.66□□□□□ -0.86
SMARCA2-240ENST00000635392 COL13A1Q5TAT6 717 aaPredicted RBP9.66□□□□□ -0.86
SMARCA2-240ENST00000635392 MEI1Q5TIA1 1274 aa9.66□□□□□ -0.86
SMARCA2-240ENST00000635392 KRT25Q7Z3Z0 450 aa9.66□□□□□ -0.86
SMARCA2-240ENST00000635392 SLC30A3Q99726 388 aa9.66□□□□□ -0.86
SMARCA2-240ENST00000635392 C3orf58Q8NDZ4 430 aa9.65□□□□□ -0.86
SMARCA2-240ENST00000635392 ZNF837Q96EG3 531 aaPredicted RBP9.65□□□□□ -0.86
SMARCA2-240ENST00000635392 SRA1Q9HD15 236 aaKnown RBP9.65□□□□□ -0.86
SMARCA2-240ENST00000635392 TLR7Q9NYK1 1049 aaKnown RBP9.65□□□□□ -0.86
SMARCA2-240ENST00000635392 MARK1Q9P0L2 795 aa9.65□□□□□ -0.86
SMARCA2-240ENST00000635392 KANSL3Q9P2N6 904 aa9.65□□□□□ -0.86
SMARCA2-240ENST00000635392 GADD45BO75293 160 aaPredicted RBP9.64□□□□□ -0.87
SMARCA2-240ENST00000635392 KIF4AO95239 1232 aa9.64□□□□□ -0.87
SMARCA2-240ENST00000635392 ST13P50502 369 aaKnown RBP9.64□□□□□ -0.87
SMARCA2-240ENST00000635392 SPEM2Q0P670 501 aa9.64□□□□□ -0.87
SMARCA2-240ENST00000635392 TAF1CQ15572 869 aaPredicted RBP9.64□□□□□ -0.87
SMARCA2-240ENST00000635392 SREK1Q8WXA9 508 aaKnown RBP9.64□□□□□ -0.87
SMARCA2-240ENST00000635392 ABHD17AQ96GS6 310 aa9.64□□□□□ -0.87
SMARCA2-240ENST00000635392 GMCL1Q96IK5 515 aa9.64□□□□□ -0.87
SMARCA2-240ENST00000635392 TINF2Q9BSI4 451 aa9.64□□□□□ -0.87
SMARCA2-240ENST00000635392 EFCC1Q9HA90 598 aa9.64□□□□□ -0.87
SMARCA2-240ENST00000635392 DDX41Q9UJV9 622 aaKnown RBP9.64□□□□□ -0.87
SMARCA2-240ENST00000635392 RARAP10276 462 aa9.63□□□□□ -0.87
SMARCA2-240ENST00000635392 NFKB1P19838 968 aa9.63□□□□□ -0.87
SMARCA2-240ENST00000635392 ITGA6P23229 1130 aa9.63□□□□□ -0.87
SMARCA2-240ENST00000635392 SOX18P35713 384 aa9.63□□□□□ -0.87
SMARCA2-240ENST00000635392 RACK1P63244 317 aaKnown RBP9.63□□□□□ -0.87
SMARCA2-240ENST00000635392 KIFC2Q96AC6 838 aa9.63□□□□□ -0.87
SMARCA2-240ENST00000635392 CNTNAP3BQ96NU0 1288 aa9.63□□□□□ -0.87
SMARCA2-240ENST00000635392 TCF12Q99081 682 aa9.63□□□□□ -0.87
SMARCA2-240ENST00000635392 CNTNAP3Q9BZ76 1288 aa9.63□□□□□ -0.87
SMARCA2-240ENST00000635392 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.63□□□□□ -0.87
SMARCA2-240ENST00000635392 EDN3P14138 238 aa9.62□□□□□ -0.87
SMARCA2-240ENST00000635392 CD33P20138 364 aa9.62□□□□□ -0.87
SMARCA2-240ENST00000635392 MAP3K10Q02779 954 aa9.62□□□□□ -0.87
SMARCA2-240ENST00000635392 FAM182BQ5T319 152 aa9.62□□□□□ -0.87
SMARCA2-240ENST00000635392 PRPF40BQ6NWY9 871 aaKnown RBP9.62□□□□□ -0.87
SMARCA2-240ENST00000635392 CEP120Q8N960 986 aa9.62□□□□□ -0.87
SMARCA2-240ENST00000635392 DRC1Q96MC2 740 aa9.62□□□□□ -0.87
SMARCA2-240ENST00000635392 ACBD3Q9H3P7 528 aa9.62□□□□□ -0.87
SMARCA2-240ENST00000635392 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.62□□□□□ -0.87
SMARCA2-240ENST00000635392 ZNF394Q53GI3 561 aa9.61□□□□□ -0.87
SMARCA2-240ENST00000635392 ERMP1Q7Z2K6 904 aa9.61□□□□□ -0.87
SMARCA2-240ENST00000635392 SLC43A3Q8NBI5 491 aa9.61□□□□□ -0.87
SMARCA2-240ENST00000635392 GTPBP3Q969Y2 492 aaKnown RBP9.61□□□□□ -0.87
SMARCA2-240ENST00000635392 ATXN7L1Q9ULK2 861 aaPredicted RBP9.61□□□□□ -0.87
SMARCA2-240ENST00000635392 ACPPP15309 386 aa9.6□□□□□ -0.87
SMARCA2-240ENST00000635392 ANKRD24Q8TF21 1146 aa9.6□□□□□ -0.87
SMARCA2-240ENST00000635392 EHD4Q9H223 541 aa9.6□□□□□ -0.87
SMARCA2-240ENST00000635392 ABCB6Q9NP58 842 aa9.6□□□□□ -0.87
SMARCA2-240ENST00000635392 PHF20L1A8MW92 1017 aa9.59□□□□□ -0.87
SMARCA2-240ENST00000635392 ZBTB42B2RXF5 422 aa9.59□□□□□ -0.87
SMARCA2-240ENST00000635392 NFKBIEO00221 500 aa9.59□□□□□ -0.87
SMARCA2-240ENST00000635392 GSTT1P30711 240 aa9.59□□□□□ -0.87
SMARCA2-240ENST00000635392 TNNI2P48788 182 aa9.59□□□□□ -0.87
SMARCA2-240ENST00000635392 CTBSQ01459 385 aa9.59□□□□□ -0.87
SMARCA2-240ENST00000635392 RAB44Q7Z6P3 723 aaPredicted RBP9.59□□□□□ -0.87
SMARCA2-240ENST00000635392 CCNJLQ8IV13 435 aa9.59□□□□□ -0.87
SMARCA2-240ENST00000635392 ZKSCAN3Q9BRR0 538 aa9.59□□□□□ -0.87
SMARCA2-240ENST00000635392 TRAK1Q9UPV9 953 aa9.59□□□□□ -0.87
SMARCA2-240ENST00000635392 TMEM238LA0A1B0GVL6 79 aa9.58□□□□□ -0.88
SMARCA2-240ENST00000635392 PSAPP07602 524 aa9.58□□□□□ -0.88
SMARCA2-240ENST00000635392 HYAL2Q12891 473 aa9.58□□□□□ -0.88
SMARCA2-240ENST00000635392 DHX32Q7L7V1 743 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-240ENST00000635392 BHMTQ93088 406 aa9.58□□□□□ -0.88
SMARCA2-240ENST00000635392 PNMA5Q96PV4 448 aa9.58□□□□□ -0.88
SMARCA2-240ENST00000635392 CCSER2Q9H7U1 834 aa9.58□□□□□ -0.88
SMARCA2-240ENST00000635392 DZANK1Q9NVP4 752 aa9.58□□□□□ -0.88
SMARCA2-240ENST00000635392 GGT7Q9UJ14 662 aa9.58□□□□□ -0.88
SMARCA2-240ENST00000635392 PCDHGB7Q9Y5F8 929 aa9.58□□□□□ -0.88
SMARCA2-240ENST00000635392 FGFR3P22607 806 aa9.57□□□□□ -0.88
SMARCA2-240ENST00000635392 LORP23490 312 aaPredicted RBP9.57□□□□□ -0.88
SMARCA2-240ENST00000635392 NRLP54845 237 aa9.57□□□□□ -0.88
SMARCA2-240ENST00000635392 PLAURQ03405 335 aa9.57□□□□□ -0.88
SMARCA2-240ENST00000635392 HS2ST1Q7LGA3 356 aa9.57□□□□□ -0.88
SMARCA2-240ENST00000635392 ZNF654Q8IZM8 581 aa9.57□□□□□ -0.88
SMARCA2-240ENST00000635392 TRPM4Q8TD43 1214 aa9.57□□□□□ -0.88
SMARCA2-240ENST00000635392 NOC4LQ9BVI4 516 aaKnown RBP9.57□□□□□ -0.88
SMARCA2-240ENST00000635392 LIN7BQ9HAP6 207 aa9.57□□□□□ -0.88
SMARCA2-240ENST00000635392 COPRSQ9NQ92 184 aa9.57□□□□□ -0.88
SMARCA2-240ENST00000635392 C2CD2LO14523 706 aa9.56□□□□□ -0.88
SMARCA2-240ENST00000635392 PPFIA3O75145 1194 aa9.56□□□□□ -0.88
SMARCA2-240ENST00000635392 TRPA1O75762 1119 aa9.56□□□□□ -0.88
SMARCA2-240ENST00000635392 GMPRP36959 345 aa9.56□□□□□ -0.88
SMARCA2-240ENST00000635392 USP48Q86UV5 1035 aa9.56□□□□□ -0.88
SMARCA2-240ENST00000635392 GMLQ99445 158 aa9.56□□□□□ -0.88
SMARCA2-240ENST00000635392 OSMRQ99650 979 aa9.56□□□□□ -0.88
SMARCA2-240ENST00000635392 NXF1Q9UBU9 619 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-240ENST00000635392 GRIA4P48058 902 aa9.55□□□□□ -0.88
SMARCA2-240ENST00000635392 FCGRTP55899 365 aa9.55□□□□□ -0.88
SMARCA2-240ENST00000635392 NCAPG2Q86XI2 1143 aa9.55□□□□□ -0.88
SMARCA2-240ENST00000635392 SLC16A10Q8TF71 515 aa9.55□□□□□ -0.88
SMARCA2-240ENST00000635392 NANOS1Q8WY41 292 aaKnown RBP9.55□□□□□ -0.88
SMARCA2-240ENST00000635392 HHIPQ96QV1 700 aa9.55□□□□□ -0.88
SMARCA2-240ENST00000635392 CAPN10Q9HC96 672 aa9.55□□□□□ -0.88
SMARCA2-240ENST00000635392 PPP4R2Q9NY27 417 aa9.55□□□□□ -0.88
SMARCA2-240ENST00000635392 XRCC5P13010 732 aaKnown RBP9.54□□□□□ -0.88
SMARCA2-240ENST00000635392 GPLD1P80108 840 aa9.54□□□□□ -0.88
SMARCA2-240ENST00000635392 VWA5B2Q8N398 1253 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms