RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	GSX2	Q9BZM3	304 aa		10.21	□□□□□ -0.77
SMARCA2-238	ENST00000635273	SUV39H2	Q9H5I1	410 aa		10.21	□□□□□ -0.77
SMARCA2-238	ENST00000635273	CAPN10	Q9HC96	672 aa		10.21	□□□□□ -0.77
SMARCA2-238	ENST00000635273	DDX41	Q9UJV9	622 aa	Known RBP	10.21	□□□□□ -0.77
SMARCA2-238	ENST00000635273	MAN1A2	O60476	641 aa		10.2	□□□□□ -0.78
SMARCA2-238	ENST00000635273	CYP2E1	P05181	493 aa	Predicted RBP	10.2	□□□□□ -0.78
SMARCA2-238	ENST00000635273	TARS	P26639	723 aa	Known RBP	10.2	□□□□□ -0.78
SMARCA2-238	ENST00000635273	CCIN	Q13939	588 aa		10.2	□□□□□ -0.78
SMARCA2-238	ENST00000635273	ZNF394	Q53GI3	561 aa		10.2	□□□□□ -0.78
SMARCA2-238	ENST00000635273	FIGNL1	Q6PIW4	674 aa		10.2	□□□□□ -0.78
SMARCA2-238	ENST00000635273	SLC43A3	Q8NBI5	491 aa		10.2	□□□□□ -0.78
SMARCA2-238	ENST00000635273	PCDHGC4	Q9Y5F7	938 aa		10.2	□□□□□ -0.78
SMARCA2-238	ENST00000635273	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.2	□□□□□ -0.78
SMARCA2-238	ENST00000635273	ST13	P50502	369 aa	Known RBP	10.19	□□□□□ -0.78
SMARCA2-238	ENST00000635273	RACK1	P63244	317 aa	Known RBP	10.19	□□□□□ -0.78
SMARCA2-238	ENST00000635273	KIAA0319	Q5VV43	1072 aa		10.19	□□□□□ -0.78
SMARCA2-238	ENST00000635273	RIPOR1	Q6ZS17	1223 aa		10.19	□□□□□ -0.78
SMARCA2-238	ENST00000635273	HS2ST1	Q7LGA3	356 aa		10.19	□□□□□ -0.78
SMARCA2-238	ENST00000635273	UBXN4	Q92575	508 aa		10.19	□□□□□ -0.78
SMARCA2-238	ENST00000635273	GGT7	Q9UJ14	662 aa		10.19	□□□□□ -0.78
SMARCA2-238	ENST00000635273	PCDHGB7	Q9Y5F8	929 aa		10.19	□□□□□ -0.78
SMARCA2-238	ENST00000635273	MMP20	O60882	483 aa		10.18	□□□□□ -0.78
SMARCA2-238	ENST00000635273	TNNI2	P48788	182 aa		10.18	□□□□□ -0.78
SMARCA2-238	ENST00000635273	UBAP2L	Q14157	1087 aa	Known RBP	10.18	□□□□□ -0.78
SMARCA2-238	ENST00000635273	KRT25	Q7Z3Z0	450 aa		10.18	□□□□□ -0.78
SMARCA2-238	ENST00000635273	USP48	Q86UV5	1035 aa		10.18	□□□□□ -0.78
SMARCA2-238	ENST00000635273	ZNF654	Q8IZM8	581 aa		10.18	□□□□□ -0.78
SMARCA2-238	ENST00000635273	OR13H1	Q8NG92	308 aa		10.18	□□□□□ -0.78
SMARCA2-238	ENST00000635273	KRTAP4-8	Q9BYQ9	185 aa		10.18	□□□□□ -0.78
SMARCA2-238	ENST00000635273	SRA1	Q9HD15	236 aa	Known RBP	10.18	□□□□□ -0.78
SMARCA2-238	ENST00000635273	LATS2	Q9NRM7	1088 aa		10.18	□□□□□ -0.78
SMARCA2-238	ENST00000635273	KANSL3	Q9P2N6	904 aa		10.18	□□□□□ -0.78
SMARCA2-238	ENST00000635273		A0A1W2PP55	124 aa		10.17	□□□□□ -0.78
SMARCA2-238	ENST00000635273	DCDC2B	A2VCK2	349 aa		10.17	□□□□□ -0.78
SMARCA2-238	ENST00000635273	KHNYN	O15037	678 aa	Known RBP	10.17	□□□□□ -0.78
SMARCA2-238	ENST00000635273	EDN3	P14138	238 aa		10.17	□□□□□ -0.78
SMARCA2-238	ENST00000635273	TNP2	Q05952	138 aa		10.17	□□□□□ -0.78
SMARCA2-238	ENST00000635273	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.17	□□□□□ -0.78
SMARCA2-238	ENST00000635273	STRN4	Q9NRL3	753 aa		10.17	□□□□□ -0.78
SMARCA2-238	ENST00000635273	ZFAT	Q9P243	1243 aa		10.17	□□□□□ -0.78
SMARCA2-238	ENST00000635273	SLC35F4	A4IF30	521 aa		10.16	□□□□□ -0.78
SMARCA2-238	ENST00000635273	SOBP	A7XYQ1	873 aa		10.16	□□□□□ -0.78
SMARCA2-238	ENST00000635273	LAMC2	Q13753	1193 aa		10.16	□□□□□ -0.78
SMARCA2-238	ENST00000635273	GLIS3	Q8NEA6	775 aa		10.16	□□□□□ -0.78
SMARCA2-238	ENST00000635273	TANGO6	Q9C0B7	1094 aa		10.16	□□□□□ -0.78
SMARCA2-238	ENST00000635273	NUCKS1	Q9H1E3	243 aa	Known RBP	10.16	□□□□□ -0.78
SMARCA2-238	ENST00000635273	EHD4	Q9H223	541 aa		10.16	□□□□□ -0.78
SMARCA2-238	ENST00000635273	PPP4R2	Q9NY27	417 aa		10.16	□□□□□ -0.78
SMARCA2-238	ENST00000635273	SALL4	Q9UJQ4	1053 aa		10.16	□□□□□ -0.78
SMARCA2-238	ENST00000635273	PHF20L1	A8MW92	1017 aa		10.15	□□□□□ -0.78
SMARCA2-238	ENST00000635273	RARA	P10276	462 aa		10.15	□□□□□ -0.78
SMARCA2-238	ENST00000635273	MAPT	P10636	758 aa	Known RBP	10.15	□□□□□ -0.78
SMARCA2-238	ENST00000635273	GSTT1	P30711	240 aa		10.15	□□□□□ -0.78
SMARCA2-238	ENST00000635273	PTS	Q03393	145 aa		10.15	□□□□□ -0.78
SMARCA2-238	ENST00000635273	GNL2	Q13823	731 aa	Known RBP	10.15	□□□□□ -0.78
SMARCA2-238	ENST00000635273	GRIN2C	Q14957	1233 aa		10.15	□□□□□ -0.78
SMARCA2-238	ENST00000635273	HCN2	Q9UL51	889 aa		10.15	□□□□□ -0.78
SMARCA2-238	ENST00000635273	TRAK1	Q9UPV9	953 aa		10.15	□□□□□ -0.78
SMARCA2-238	ENST00000635273		H7C1W4	665 aa		10.14	□□□□□ -0.79
SMARCA2-238	ENST00000635273	DBN1	Q16643	649 aa		10.14	□□□□□ -0.79
SMARCA2-238	ENST00000635273	ERMP1	Q7Z2K6	904 aa		10.14	□□□□□ -0.79
SMARCA2-238	ENST00000635273	C3orf58	Q8NDZ4	430 aa		10.14	□□□□□ -0.79
SMARCA2-238	ENST00000635273	NDFIP2	Q9NV92	336 aa		10.14	□□□□□ -0.79
SMARCA2-238	ENST00000635273	PRKAG2	Q9UGJ0	569 aa		10.14	□□□□□ -0.79
SMARCA2-238	ENST00000635273	ADAMTS8	Q9UP79	889 aa		10.14	□□□□□ -0.79
SMARCA2-238	ENST00000635273	INPP5F	Q9Y2H2	1132 aa		10.14	□□□□□ -0.79
SMARCA2-238	ENST00000635273	BNIP3L	O60238	219 aa		10.13	□□□□□ -0.79
SMARCA2-238	ENST00000635273	TLR7	Q9NYK1	1049 aa	Known RBP	10.13	□□□□□ -0.79
SMARCA2-238	ENST00000635273	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.13	□□□□□ -0.79
SMARCA2-238	ENST00000635273	NFKB1	P19838	968 aa		10.12	□□□□□ -0.79
SMARCA2-238	ENST00000635273	PRPF40B	Q6NWY9	871 aa	Known RBP	10.12	□□□□□ -0.79
SMARCA2-238	ENST00000635273	PNMA5	Q96PV4	448 aa		10.12	□□□□□ -0.79
SMARCA2-238	ENST00000635273	GML	Q99445	158 aa		10.12	□□□□□ -0.79
SMARCA2-238	ENST00000635273	COPRS	Q9NQ92	184 aa		10.12	□□□□□ -0.79
SMARCA2-238	ENST00000635273	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.12	□□□□□ -0.79
SMARCA2-238	ENST00000635273	MARK1	Q9P0L2	795 aa		10.12	□□□□□ -0.79
SMARCA2-238	ENST00000635273	NACAD	O15069	1562 aa		10.12	□□□□□ -0.79
SMARCA2-238	ENST00000635273	MAP3K6	O95382	1288 aa		10.11	□□□□□ -0.79
SMARCA2-238	ENST00000635273	SOX18	P35713	384 aa		10.11	□□□□□ -0.79
SMARCA2-238	ENST00000635273	FCGRT	P55899	365 aa		10.11	□□□□□ -0.79
SMARCA2-238	ENST00000635273	SPEM2	Q0P670	501 aa		10.11	□□□□□ -0.79
SMARCA2-238	ENST00000635273	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.11	□□□□□ -0.79
SMARCA2-238	ENST00000635273	TRIM22	Q8IYM9	498 aa		10.11	□□□□□ -0.79
SMARCA2-238	ENST00000635273	EFCC1	Q9HA90	598 aa		10.11	□□□□□ -0.79
SMARCA2-238	ENST00000635273	TTF2	Q9UNY4	1162 aa	Known RBP	10.11	□□□□□ -0.79
SMARCA2-238	ENST00000635273	TMEM238L	A0A1B0GVL6	79 aa		10.1	□□□□□ -0.79
SMARCA2-238	ENST00000635273	KIF4A	O95239	1232 aa		10.1	□□□□□ -0.79
SMARCA2-238	ENST00000635273	PSAP	P07602	524 aa		10.1	□□□□□ -0.79
SMARCA2-238	ENST00000635273	NCAPG2	Q86XI2	1143 aa		10.1	□□□□□ -0.79
SMARCA2-238	ENST00000635273	CCDC155	Q8N6L0	562 aa		10.1	□□□□□ -0.79
SMARCA2-238	ENST00000635273	ABHD17A	Q96GS6	310 aa		10.1	□□□□□ -0.79
SMARCA2-238	ENST00000635273	TCF12	Q99081	682 aa		10.1	□□□□□ -0.79
SMARCA2-238	ENST00000635273	SLC30A3	Q99726	388 aa		10.1	□□□□□ -0.79
SMARCA2-238	ENST00000635273	NOC4L	Q9BVI4	516 aa	Known RBP	10.1	□□□□□ -0.79
SMARCA2-238	ENST00000635273	LIN7B	Q9HAP6	207 aa		10.1	□□□□□ -0.79
SMARCA2-238	ENST00000635273	HOXD8	P13378	290 aa	Predicted RBP	10.09	□□□□□ -0.79
SMARCA2-238	ENST00000635273	DNAJA1	P31689	397 aa	Known RBP	10.09	□□□□□ -0.79
SMARCA2-238	ENST00000635273	HYAL2	Q12891	473 aa		10.09	□□□□□ -0.79
SMARCA2-238	ENST00000635273	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.09	□□□□□ -0.79
SMARCA2-238	ENST00000635273	ABCB6	Q9NP58	842 aa		10.09	□□□□□ -0.79

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