RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 MYRIPQ8NFW9 859 aa12.64□□□□□ -0.39
PSPC1-207ENST00000635251 PLBD2Q8NHP8 589 aa12.64□□□□□ -0.39
PSPC1-207ENST00000635251 C19orf44Q9H6X5 657 aa12.64□□□□□ -0.39
PSPC1-207ENST00000635251 KIF1AQ12756 1690 aa12.64□□□□□ -0.39
PSPC1-207ENST00000635251 CHRNA2Q15822 529 aa12.64□□□□□ -0.39
PSPC1-207ENST00000635251 MTERF4Q7Z6M4 381 aaKnown RBP12.64□□□□□ -0.39
PSPC1-207ENST00000635251 DDX17Q92841 729 aaKnown RBP12.64□□□□□ -0.39
PSPC1-207ENST00000635251 CLSTN2Q9H4D0 955 aa12.64□□□□□ -0.39
PSPC1-207ENST00000635251 AFDNP55196 1824 aaKnown RBP12.64□□□□□ -0.39
PSPC1-207ENST00000635251 CYP27B1O15528 508 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 FOSBP53539 338 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 RESTQ13127 1097 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 DRC7Q8IY82 874 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 KBTBD3Q8NAB2 608 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 CABLES1Q8TDN4 633 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 ZSCAN16Q9H4T2 348 aaPredicted RBP12.63□□□□□ -0.39
PSPC1-207ENST00000635251 GOLIM4O00461 696 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 NR1I2O75469 434 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 SCRN1Q12765 414 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 CBX8Q9HC52 389 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 SPTLC3Q9NUV7 552 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 CFAP45Q9UL16 551 aa12.63□□□□□ -0.39
PSPC1-207ENST00000635251 NAP1L2Q9ULW6 460 aaPredicted RBP12.63□□□□□ -0.39
PSPC1-207ENST00000635251 HMGB1P09429 215 aaKnown RBP12.62□□□□□ -0.39
PSPC1-207ENST00000635251 ATF3P18847 181 aa12.62□□□□□ -0.39
PSPC1-207ENST00000635251 CEBPZQ03701 1054 aaKnown RBP12.62□□□□□ -0.39
PSPC1-207ENST00000635251 ARID3AQ99856 593 aa12.62□□□□□ -0.39
PSPC1-207ENST00000635251 KCNF1Q9H3M0 494 aa12.62□□□□□ -0.39
PSPC1-207ENST00000635251 PAG1Q9NWQ8 432 aa12.62□□□□□ -0.39
PSPC1-207ENST00000635251 PYCARDQ9ULZ3 195 aa12.62□□□□□ -0.39
PSPC1-207ENST00000635251 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
PSPC1-207ENST00000635251 KIAA1524Q8TCG1 905 aa12.62□□□□□ -0.39
PSPC1-207ENST00000635251 PGBD1Q96JS3 809 aa12.62□□□□□ -0.39
PSPC1-207ENST00000635251 CASP7P55210 303 aa12.61□□□□□ -0.39
PSPC1-207ENST00000635251 CHAF1AQ13111 956 aaPredicted RBP12.61□□□□□ -0.39
PSPC1-207ENST00000635251 STOX1Q6ZVD7 989 aa12.61□□□□□ -0.39
PSPC1-207ENST00000635251 DHX32Q7L7V1 743 aaKnown RBP12.61□□□□□ -0.39
PSPC1-207ENST00000635251 TRIM5Q9C035 493 aa12.61□□□□□ -0.39
PSPC1-207ENST00000635251 HELLSQ9NRZ9 838 aa12.61□□□□□ -0.39
PSPC1-207ENST00000635251 KIF3AQ9Y496 699 aa12.61□□□□□ -0.39
PSPC1-207ENST00000635251 PFKFB2O60825 505 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 PTGS1P23219 599 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 TIMM10P62072 90 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 FOXO4P98177 505 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 APOBRQ0VD83 1088 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 SLFNL1Q499Z3 407 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 LLPHQ9BRT6 129 aaKnown RBP12.6□□□□□ -0.39
PSPC1-207ENST00000635251 ALS2Q96Q42 1657 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 MST1RQ04912 1400 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 ARFGEF2Q9Y6D5 1785 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 H7C1W4 665 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 ZNF165P49910 485 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 DNAJC25Q9H1X3 360 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 CWC25Q9NXE8 425 aaPredicted RBP12.6□□□□□ -0.39
PSPC1-207ENST00000635251 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
PSPC1-207ENST00000635251 PTPDC1A2A3K4 754 aa12.59□□□□□ -0.39
PSPC1-207ENST00000635251 IFIT1P09914 478 aaKnown RBP12.59□□□□□ -0.39
PSPC1-207ENST00000635251 IL15P40933 162 aaPredicted RBP12.59□□□□□ -0.39
PSPC1-207ENST00000635251 CCT2P78371 535 aaKnown RBP12.59□□□□□ -0.39
PSPC1-207ENST00000635251 RBM43Q6ZSC3 357 aaKnown RBP12.59□□□□□ -0.39
PSPC1-207ENST00000635251 ATG9AQ7Z3C6 839 aa12.59□□□□□ -0.39
PSPC1-207ENST00000635251 SMARCC2Q8TAQ2 1214 aa12.59□□□□□ -0.39
PSPC1-207ENST00000635251 DSCC1Q9BVC3 393 aa12.59□□□□□ -0.39
PSPC1-207ENST00000635251 TTLL7Q6ZT98 887 aa12.59□□□□□ -0.39
PSPC1-207ENST00000635251 CCDC186Q7Z3E2 898 aa12.59□□□□□ -0.39
PSPC1-207ENST00000635251 NSUN7Q8NE18 718 aaKnown RBP12.59□□□□□ -0.39
PSPC1-207ENST00000635251 NAA16Q6N069 864 aaPredicted RBP12.58□□□□□ -0.4
PSPC1-207ENST00000635251 TDRD7Q8NHU6 1098 aaKnown RBP12.58□□□□□ -0.4
PSPC1-207ENST00000635251 TSC1Q92574 1164 aa12.58□□□□□ -0.4
PSPC1-207ENST00000635251 ZBTB3Q9H5J0 574 aa12.58□□□□□ -0.4
PSPC1-207ENST00000635251 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
PSPC1-207ENST00000635251 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
PSPC1-207ENST00000635251 E7EWF7 191 aa12.58□□□□□ -0.4
PSPC1-207ENST00000635251 GOLGA6L19H0YKK7 550 aa12.58□□□□□ -0.4
PSPC1-207ENST00000635251 ZNF75DP51815 510 aa12.58□□□□□ -0.4
PSPC1-207ENST00000635251 LRRC24Q50LG9 513 aa12.58□□□□□ -0.4
PSPC1-207ENST00000635251 ZMYM1Q5SVZ6 1142 aa12.58□□□□□ -0.4
PSPC1-207ENST00000635251 NBPF14Q5TI25 921 aa12.58□□□□□ -0.4
PSPC1-207ENST00000635251 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
PSPC1-207ENST00000635251 CCAR1Q8IX12 1150 aaKnown RBP12.58□□□□□ -0.4
PSPC1-207ENST00000635251 NBPF15Q8N660 670 aa12.58□□□□□ -0.4
PSPC1-207ENST00000635251 ZNF594Q96JF6 807 aaPredicted RBP12.58□□□□□ -0.4
PSPC1-207ENST00000635251 ZNF396Q96N95 335 aaPredicted RBP12.58□□□□□ -0.4
PSPC1-207ENST00000635251 GPR108Q9NPR9 543 aa12.58□□□□□ -0.4
PSPC1-207ENST00000635251 ABCC6O95255 1503 aa12.57□□□□□ -0.4
PSPC1-207ENST00000635251 EYA2O00167 538 aa12.57□□□□□ -0.4
PSPC1-207ENST00000635251 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
PSPC1-207ENST00000635251 PPFIA3O75145 1194 aa12.57□□□□□ -0.4
PSPC1-207ENST00000635251 HSPD1P10809 573 aaKnown RBP12.57□□□□□ -0.4
PSPC1-207ENST00000635251 GTF2F1P35269 517 aaKnown RBP eCLIP12.57□□□□□ -0.4
PSPC1-207ENST00000635251 CCDC73Q6ZRK6 1079 aa12.57□□□□□ -0.4
PSPC1-207ENST00000635251 CHST3Q7LGC8 479 aa12.57□□□□□ -0.4
PSPC1-207ENST00000635251 NCOA5Q9HCD5 579 aaKnown RBP12.57□□□□□ -0.4
PSPC1-207ENST00000635251 MAST3O60307 1309 aa12.57□□□□□ -0.4
PSPC1-207ENST00000635251 A0A1B0GUL7 405 aa12.57□□□□□ -0.4
PSPC1-207ENST00000635251 CTDNEP1O95476 244 aa12.57□□□□□ -0.4
PSPC1-207ENST00000635251 EXOSC10Q01780 885 aaKnown RBP12.57□□□□□ -0.4
PSPC1-207ENST00000635251 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.57□□□□□ -0.4
PSPC1-207ENST00000635251 FTOQ9C0B1 505 aaKnown RBP eCLIP12.57□□□□□ -0.4
PSPC1-207ENST00000635251 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms