RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 CST9Q5W186 159 aa12.79□□□□□ -0.36
RHOXF1P3-201ENST00000635058 TSPYL6Q8N831 410 aa12.79□□□□□ -0.36
RHOXF1P3-201ENST00000635058 JARID2Q92833 1246 aaPredicted RBP12.79□□□□□ -0.36
RHOXF1P3-201ENST00000635058 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
RHOXF1P3-201ENST00000635058 CAPNS2Q96L46 248 aa12.79□□□□□ -0.36
RHOXF1P3-201ENST00000635058 GPR101Q96P66 508 aaPredicted RBP12.79□□□□□ -0.36
RHOXF1P3-201ENST00000635058 CDC5LQ99459 802 aaKnown RBP12.79□□□□□ -0.36
RHOXF1P3-201ENST00000635058 MRS2Q9HD23 443 aa12.79□□□□□ -0.36
RHOXF1P3-201ENST00000635058 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
RHOXF1P3-201ENST00000635058 TLL2Q9Y6L7 1015 aa12.79□□□□□ -0.36
RHOXF1P3-201ENST00000635058 IL16Q14005 1332 aa12.79□□□□□ -0.36
RHOXF1P3-201ENST00000635058 HIRAP54198 1017 aaPredicted RBP12.78□□□□□ -0.36
RHOXF1P3-201ENST00000635058 FMR1Q06787 632 aaKnown RBP eCLIP12.78□□□□□ -0.36
RHOXF1P3-201ENST00000635058 CCDC85AQ96PX6 553 aaPredicted RBP12.78□□□□□ -0.36
RHOXF1P3-201ENST00000635058 GLIS2Q9BZE0 524 aaPredicted RBP12.78□□□□□ -0.36
RHOXF1P3-201ENST00000635058 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
RHOXF1P3-201ENST00000635058 MAP2K2P36507 400 aa12.77□□□□□ -0.37
RHOXF1P3-201ENST00000635058 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
RHOXF1P3-201ENST00000635058 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.37
RHOXF1P3-201ENST00000635058 CYP4F22Q6NT55 531 aa12.77□□□□□ -0.37
RHOXF1P3-201ENST00000635058 USP48Q86UV5 1035 aa12.77□□□□□ -0.37
RHOXF1P3-201ENST00000635058 TRPM4Q8TD43 1214 aa12.77□□□□□ -0.37
RHOXF1P3-201ENST00000635058 DCPSQ96C86 337 aaKnown RBP12.77□□□□□ -0.37
RHOXF1P3-201ENST00000635058 VIL1P09327 827 aaKnown RBP12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 ATP2B4P23634 1241 aa12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 LBX1P52954 281 aa12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 CTSWP56202 376 aa12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 TBC1D10BQ4KMP7 808 aaPredicted RBP12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 SAMD7Q7Z3H4 446 aa12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 SAPCD2Q86UD0 394 aa12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 HHIPL1Q96JK4 782 aa12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 KCNQ5Q9NR82 932 aa12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 XDHP47989 1333 aa12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 ANKRD36CQ5JPF3 1778 aa12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
RHOXF1P3-201ENST00000635058 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
RHOXF1P3-201ENST00000635058 IGKV5-2P06315 115 aa12.75□□□□□ -0.37
RHOXF1P3-201ENST00000635058 KRT26Q7Z3Y9 468 aa12.75□□□□□ -0.37
RHOXF1P3-201ENST00000635058 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
RHOXF1P3-201ENST00000635058 TTLL11Q8NHH1 800 aa12.75□□□□□ -0.37
RHOXF1P3-201ENST00000635058 MYH16Q9H6N6 1097 aa12.75□□□□□ -0.37
RHOXF1P3-201ENST00000635058 BSDC1Q9NW68 430 aaPredicted RBP12.75□□□□□ -0.37
RHOXF1P3-201ENST00000635058 SALL2Q9Y467 1007 aaPredicted RBP12.75□□□□□ -0.37
RHOXF1P3-201ENST00000635058 SHTN1A0MZ66 631 aa12.74□□□□□ -0.37
RHOXF1P3-201ENST00000635058 NEURL1BA8MQ27 555 aa12.74□□□□□ -0.37
RHOXF1P3-201ENST00000635058 IGHMBP2P38935 993 aaKnown RBP12.74□□□□□ -0.37
RHOXF1P3-201ENST00000635058 FKBP5Q13451 457 aaPredicted RBP12.74□□□□□ -0.37
RHOXF1P3-201ENST00000635058 CWF19L2Q2TBE0 894 aaKnown RBP12.74□□□□□ -0.37
RHOXF1P3-201ENST00000635058 PODNQ7Z5L7 613 aa12.74□□□□□ -0.37
RHOXF1P3-201ENST00000635058 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
RHOXF1P3-201ENST00000635058 C2orf69Q8N8R5 385 aa12.74□□□□□ -0.37
RHOXF1P3-201ENST00000635058 AGBL3Q8NEM8 1001 aa12.74□□□□□ -0.37
RHOXF1P3-201ENST00000635058 LTBP1Q14766 1721 aa12.74□□□□□ -0.37
RHOXF1P3-201ENST00000635058 H7C1W4 665 aa12.73□□□□□ -0.37
RHOXF1P3-201ENST00000635058 CA12O43570 354 aa12.73□□□□□ -0.37
RHOXF1P3-201ENST00000635058 FLIIQ13045 1269 aa12.73□□□□□ -0.37
RHOXF1P3-201ENST00000635058 KIF4BQ2VIQ3 1234 aa12.73□□□□□ -0.37
RHOXF1P3-201ENST00000635058 RSBN1LQ6PCB5 846 aaPredicted RBP12.73□□□□□ -0.37
RHOXF1P3-201ENST00000635058 UBE3BQ7Z3V4 1068 aa12.73□□□□□ -0.37
RHOXF1P3-201ENST00000635058 MPHOSPH8Q99549 860 aa12.73□□□□□ -0.37
RHOXF1P3-201ENST00000635058 MINPP1Q9UNW1 487 aa12.73□□□□□ -0.37
RHOXF1P3-201ENST00000635058 RTL9Q8NET4 1388 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 USP17L3A6NCW0 530 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 USP17L4A6NCW7 530 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 HSPA8P11142 646 aaKnown RBP12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 HUNKP57058 714 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 GCKRQ14397 625 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 G2E3Q7L622 706 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 USP17L1Q7RTZ2 530 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 OGFOD1Q8N543 542 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 LINS1Q8NG48 757 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 ANKRD2Q9GZV1 360 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 GREM2Q9H772 168 aa12.72□□□□□ -0.37
RHOXF1P3-201ENST00000635058 AOC2O75106 756 aa12.71□□□□□ -0.37
RHOXF1P3-201ENST00000635058 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
RHOXF1P3-201ENST00000635058 CCT4P50991 539 aaKnown RBP12.71□□□□□ -0.37
RHOXF1P3-201ENST00000635058 NOGQ13253 232 aa12.71□□□□□ -0.37
RHOXF1P3-201ENST00000635058 CCDC102AQ96A19 550 aa12.71□□□□□ -0.37
RHOXF1P3-201ENST00000635058 GBA2Q9HCG7 927 aaPredicted RBP12.71□□□□□ -0.37
RHOXF1P3-201ENST00000635058 LEMD3Q9Y2U8 911 aa12.71□□□□□ -0.37
RHOXF1P3-201ENST00000635058 LAMB2P55268 1798 aa12.71□□□□□ -0.38
RHOXF1P3-201ENST00000635058 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 DUOX1Q9NRD9 1551 aa12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 VAMP4O75379 141 aa12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 ITGA6P23229 1130 aa12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 KCNJ4P48050 445 aa12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 BRPF1P55201 1214 aaPredicted RBP12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 ZNF280AP59817 542 aaPredicted RBP12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 EXOSC9Q06265 439 aaKnown RBP12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 SCARF1Q14162 830 aa12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 FBXW7Q969H0 707 aa12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 PLA2G12BQ9BX93 195 aa12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 DDX60Q8IY21 1712 aaKnown RBP12.7□□□□□ -0.38
RHOXF1P3-201ENST00000635058 ANKRD18BA2A2Z9 1011 aa12.69□□□□□ -0.38
RHOXF1P3-201ENST00000635058 EGFRP00533 1210 aa12.69□□□□□ -0.38
RHOXF1P3-201ENST00000635058 MMP14P50281 582 aa12.69□□□□□ -0.38
RHOXF1P3-201ENST00000635058 RGMBQ6NW40 437 aa12.69□□□□□ -0.38
RHOXF1P3-201ENST00000635058 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
RHOXF1P3-201ENST00000635058 COA1Q9GZY4 146 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms