RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 SPEF2Q9C093 1822 aa14.58□□□□□ -0.07
PHACTR4-206ENST00000632421 CDHR2Q9BYE9 1310 aa14.58□□□□□ -0.07
PHACTR4-206ENST00000632421 GPTP24298 496 aa14.58□□□□□ -0.08
PHACTR4-206ENST00000632421 ST3GAL1Q11201 340 aa14.58□□□□□ -0.08
PHACTR4-206ENST00000632421 COL9A3Q14050 684 aaPredicted RBP14.58□□□□□ -0.08
PHACTR4-206ENST00000632421 NLRP10Q86W26 655 aa14.58□□□□□ -0.08
PHACTR4-206ENST00000632421 NECAB1Q8N987 351 aa14.58□□□□□ -0.08
PHACTR4-206ENST00000632421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.58□□□□□ -0.08
PHACTR4-206ENST00000632421 NSFL1CQ9UNZ2 370 aaKnown RBP14.58□□□□□ -0.08
PHACTR4-206ENST00000632421 CCDC85AQ96PX6 553 aaPredicted RBP14.58□□□□□ -0.08
PHACTR4-206ENST00000632421 ZBTB1Q9Y2K1 713 aa14.58□□□□□ -0.08
PHACTR4-206ENST00000632421 ANKRD36CQ5JPF3 1778 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 F13A1P00488 732 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 TCEANC2Q96MN5 208 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 TMEM63CQ9P1W3 806 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 ATP6V1DQ9Y5K8 247 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 PRIM1P49642 420 aaKnown RBP14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 CDCA7Q9BWT1 371 aaPredicted RBP14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 TCHHQ07283 1943 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 DOT1LQ8TEK3 1739 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 CCDC158Q5M9N0 1113 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 ZMYM1Q5SVZ6 1142 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 GORABQ5T7V8 394 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 USP48Q86UV5 1035 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 NEK1Q96PY6 1258 aa14.57□□□□□ -0.08
PHACTR4-206ENST00000632421 NASPP49321 788 aaPredicted RBP14.56□□□□□ -0.08
PHACTR4-206ENST00000632421 TOB2Q14106 344 aaPredicted RBP14.56□□□□□ -0.08
PHACTR4-206ENST00000632421 TMEM87AQ8NBN3 555 aa14.56□□□□□ -0.08
PHACTR4-206ENST00000632421 GDPD2Q9HCC8 539 aa14.56□□□□□ -0.08
PHACTR4-206ENST00000632421 RNF113AO15541 343 aaKnown RBP14.56□□□□□ -0.08
PHACTR4-206ENST00000632421 CYP21A2P08686 494 aa14.56□□□□□ -0.08
PHACTR4-206ENST00000632421 TTC39AQ5SRH9 613 aa14.56□□□□□ -0.08
PHACTR4-206ENST00000632421 SYNE4Q8N205 404 aa14.56□□□□□ -0.08
PHACTR4-206ENST00000632421 XAGE2Q96GT9 111 aa14.56□□□□□ -0.08
PHACTR4-206ENST00000632421 SYAP1Q96A49 352 aaPredicted RBP14.55□□□□□ -0.08
PHACTR4-206ENST00000632421 DSCC1Q9BVC3 393 aa14.55□□□□□ -0.08
PHACTR4-206ENST00000632421 MTMR6Q9Y217 621 aa14.55□□□□□ -0.08
PHACTR4-206ENST00000632421 ERVV-1B6SEH8 477 aa14.55□□□□□ -0.08
PHACTR4-206ENST00000632421 ADAMTS2O95450 1211 aa14.55□□□□□ -0.08
PHACTR4-206ENST00000632421 IL6STP40189 918 aaPredicted RBP14.55□□□□□ -0.08
PHACTR4-206ENST00000632421 NUP98P52948 1817 aa14.55□□□□□ -0.08
PHACTR4-206ENST00000632421 PDIA4P13667 645 aaKnown RBP14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 ADORA1P30542 326 aa14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 CTSWP56202 376 aa14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 LRRFIP1Q32MZ4 808 aaKnown RBP14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 DZIP3Q86Y13 1208 aaKnown RBP14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 TTLL11Q8NHH1 800 aa14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 CNPY2Q9Y2B0 182 aa14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 MYH3P11055 1940 aa14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 SPATA31A1Q5TZJ5 1347 aa14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 GADD45BO75293 160 aaPredicted RBP14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 ITGA6P23229 1130 aa14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 SLFNL1Q499Z3 407 aa14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 TRMT112Q9UI30 125 aaKnown RBP14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 THRAP3Q9Y2W1 955 aaKnown RBP14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 IRS4O14654 1257 aaPredicted RBP14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 DDB1Q16531 1140 aa14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 LRSAM1Q6UWE0 723 aa14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 GREM2Q9H772 168 aa14.54□□□□□ -0.08
PHACTR4-206ENST00000632421 RIC1Q4ADV7 1423 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 MAST3O60307 1309 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 SYCE3A1L190 88 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 ANKRD18BA2A2Z9 1011 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 VPS37CA5D8V6 355 aaPredicted RBP14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 DTNBO60941 627 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 PDCP20941 246 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 METTL24Q5JXM2 366 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 ANP32BQ92688 251 aaKnown RBP14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 NRAPQ86VF7 1730 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 LDHAL6AQ6ZMR3 332 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 TBC1D2BQ9UPU7 963 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 HMGB1P09429 215 aaKnown RBP14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 ATP2B3Q16720 1220 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 LARP1BQ659C4 914 aaKnown RBP14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 RIPOR2Q9Y4F9 1068 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 PHLPP1O60346 1717 aa14.53□□□□□ -0.08
PHACTR4-206ENST00000632421 HSPD1P10809 573 aaKnown RBP14.52□□□□□ -0.08
PHACTR4-206ENST00000632421 ABCC12Q96J65 1359 aa14.52□□□□□ -0.09
PHACTR4-206ENST00000632421 STK3Q13188 491 aa14.52□□□□□ -0.09
PHACTR4-206ENST00000632421 Q6ZUG5 572 aa14.52□□□□□ -0.09
PHACTR4-206ENST00000632421 RBSNQ9H1K0 784 aa14.52□□□□□ -0.09
PHACTR4-206ENST00000632421 A0A0G2JS52 829 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 PDE8AO60658 829 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 CCDC173Q0VFZ6 552 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 CSPP1Q1MSJ5 1256 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 CNNM1Q9NRU3 951 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 ZFYP08048 801 aaPredicted RBP14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 STOX1Q6ZVD7 989 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 M0R2C6 588 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 FIBPO43427 364 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 PHF14O94880 888 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 ZNF34Q8IZ26 560 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 GTF3C6Q969F1 213 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 LTBP4Q8N2S1 1624 aa14.51□□□□□ -0.09
PHACTR4-206ENST00000632421 UBN2Q6ZU65 1347 aa14.5□□□□□ -0.09
PHACTR4-206ENST00000632421 HSP90B1P14625 803 aaKnown RBP14.5□□□□□ -0.09
PHACTR4-206ENST00000632421 UBE2HP62256 183 aa14.5□□□□□ -0.09
PHACTR4-206ENST00000632421 LAMA4Q16363 1823 aa14.5□□□□□ -0.09
PHACTR4-206ENST00000632421 FGD1P98174 961 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms