RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 TBC1D8O95759 1140 aa13.17□□□□□ -0.3
SOX2-OT-257ENST00000630553 HOXB7P09629 217 aa13.17□□□□□ -0.3
SOX2-OT-257ENST00000630553 ZNF296Q8WUU4 475 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-257ENST00000630553 UTP14AQ9BVJ6 771 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-257ENST00000630553 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
SOX2-OT-257ENST00000630553 TSPYL4Q9UJ04 414 aa13.17□□□□□ -0.3
SOX2-OT-257ENST00000630553 EGFRP00533 1210 aa13.16□□□□□ -0.3
SOX2-OT-257ENST00000630553 PARP10Q53GL7 1025 aa13.16□□□□□ -0.3
SOX2-OT-257ENST00000630553 DDX46Q7L014 1031 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-257ENST00000630553 ZNF34Q8IZ26 560 aa13.16□□□□□ -0.3
SOX2-OT-257ENST00000630553 MBIPQ9NS73 344 aa13.16□□□□□ -0.3
SOX2-OT-257ENST00000630553 ERBB4Q15303 1308 aa13.15□□□□□ -0.3
SOX2-OT-257ENST00000630553 WASHC4Q2M389 1173 aa13.15□□□□□ -0.3
SOX2-OT-257ENST00000630553 KIF4BQ2VIQ3 1234 aa13.15□□□□□ -0.3
SOX2-OT-257ENST00000630553 FBXO46Q6PJ61 603 aaPredicted RBP13.15□□□□□ -0.3
SOX2-OT-257ENST00000630553 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-257ENST00000630553 RASAL3Q86YV0 1011 aa13.15□□□□□ -0.3
SOX2-OT-257ENST00000630553 DBNDD1Q9H9R9 158 aa13.15□□□□□ -0.3
SOX2-OT-257ENST00000630553 RIMBP2O15034 1052 aa13.14□□□□□ -0.31
SOX2-OT-257ENST00000630553 RPS12P25398 132 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-257ENST00000630553 CDCA5Q96FF9 252 aa13.14□□□□□ -0.31
SOX2-OT-257ENST00000630553 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
SOX2-OT-257ENST00000630553 GGA3Q9NZ52 723 aa13.14□□□□□ -0.31
SOX2-OT-257ENST00000630553 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
SOX2-OT-257ENST00000630553 C6orf229H3BNL8 230 aa13.13□□□□□ -0.31
SOX2-OT-257ENST00000630553 HCLS1P14317 486 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-257ENST00000630553 GRAPQ13588 217 aa13.13□□□□□ -0.31
SOX2-OT-257ENST00000630553 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
SOX2-OT-257ENST00000630553 GRAPLQ8TC17 118 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-257ENST00000630553 NSFL1CQ9UNZ2 370 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-257ENST00000630553 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
SOX2-OT-257ENST00000630553 G3V3G9 751 aa13.12□□□□□ -0.31
SOX2-OT-257ENST00000630553 GPR25O00155 361 aa13.12□□□□□ -0.31
SOX2-OT-257ENST00000630553 DCAF8Q5TAQ9 597 aa13.12□□□□□ -0.31
SOX2-OT-257ENST00000630553 ECE2O60344 883 aa13.11□□□□□ -0.31
SOX2-OT-257ENST00000630553 FKBP1BP68106 108 aa13.11□□□□□ -0.31
SOX2-OT-257ENST00000630553 TTLL12Q14166 644 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-257ENST00000630553 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
SOX2-OT-257ENST00000630553 TMC4Q7Z404 712 aa13.11□□□□□ -0.31
SOX2-OT-257ENST00000630553 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-257ENST00000630553 SPINK5Q9NQ38 1064 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-257ENST00000630553 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
SOX2-OT-257ENST00000630553 CENPFP49454 3210 aa13.11□□□□□ -0.31
SOX2-OT-257ENST00000630553 E9PSI1 815 aa13.1□□□□□ -0.31
SOX2-OT-257ENST00000630553 FKTNO75072 461 aa13.1□□□□□ -0.31
SOX2-OT-257ENST00000630553 FXR1P51114 621 aaKnown RBP eCLIP13.1□□□□□ -0.31
SOX2-OT-257ENST00000630553 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
SOX2-OT-257ENST00000630553 LRP10Q7Z4F1 713 aa13.1□□□□□ -0.31
SOX2-OT-257ENST00000630553 EYA3Q99504 573 aa13.1□□□□□ -0.31
SOX2-OT-257ENST00000630553 KCNQ5Q9NR82 932 aa13.1□□□□□ -0.31
SOX2-OT-257ENST00000630553 ASTN2O75129 1339 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-257ENST00000630553 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
SOX2-OT-257ENST00000630553 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
SOX2-OT-257ENST00000630553 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
SOX2-OT-257ENST00000630553 SCARF1Q14162 830 aa13.09□□□□□ -0.31
SOX2-OT-257ENST00000630553 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
SOX2-OT-257ENST00000630553 TRMT112Q9UI30 125 aaKnown RBP13.09□□□□□ -0.31
SOX2-OT-257ENST00000630553 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
SOX2-OT-257ENST00000630553 ZBTB22O15209 634 aa13.08□□□□□ -0.32
SOX2-OT-257ENST00000630553 SLFN5Q08AF3 891 aa13.08□□□□□ -0.32
SOX2-OT-257ENST00000630553 SREBF2Q12772 1141 aa13.08□□□□□ -0.32
SOX2-OT-257ENST00000630553 PDIA6Q15084 440 aa13.08□□□□□ -0.32
SOX2-OT-257ENST00000630553 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
SOX2-OT-257ENST00000630553 INTS3Q68E01 1043 aaKnown RBP13.08□□□□□ -0.32
SOX2-OT-257ENST00000630553 MOB2Q70IA6 237 aa13.08□□□□□ -0.32
SOX2-OT-257ENST00000630553 TSR2Q969E8 191 aaKnown RBP13.08□□□□□ -0.32
SOX2-OT-257ENST00000630553 LAS1LQ9Y4W2 734 aaKnown RBP13.08□□□□□ -0.32
SOX2-OT-257ENST00000630553 TAF1P21675 1872 aa13.08□□□□□ -0.32
SOX2-OT-257ENST00000630553 POTEFA5A3E0 1075 aa13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 EIF2S2P20042 333 aaKnown RBP13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 TM4SF4P48230 202 aa13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 HSP90AB3PQ58FF7 597 aa13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 C8orf58Q8NAV2 365 aa13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 CHMP4AQ9BY43 222 aa13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 ZC3H12CQ9C0D7 883 aaKnown RBP13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 POLLQ9UGP5 575 aa13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 SALL2Q9Y467 1007 aaPredicted RBP13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 TRIM17Q9Y577 477 aa13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 SH3TC1Q8TE82 1336 aa13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
SOX2-OT-257ENST00000630553 VIL1P09327 827 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-257ENST00000630553 GPSM2P81274 684 aa13.06□□□□□ -0.32
SOX2-OT-257ENST00000630553 AIMP1Q12904 312 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-257ENST00000630553 TCIRG1Q13488 830 aa13.06□□□□□ -0.32
SOX2-OT-257ENST00000630553 NLRP10Q86W26 655 aa13.06□□□□□ -0.32
SOX2-OT-257ENST00000630553 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
SOX2-OT-257ENST00000630553 SCAF8Q9UPN6 1271 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-257ENST00000630553 LAMB2P55268 1798 aa13.06□□□□□ -0.32
SOX2-OT-257ENST00000630553 PAPPA2Q9BXP8 1791 aa13.06□□□□□ -0.32
SOX2-OT-257ENST00000630553 NF2P35240 595 aa13.05□□□□□ -0.32
SOX2-OT-257ENST00000630553 HNRNPUQ00839 825 aaKnown RBP eCLIP13.05□□□□□ -0.32
SOX2-OT-257ENST00000630553 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
SOX2-OT-257ENST00000630553 PRAMEF18Q5VWM3 479 aa13.05□□□□□ -0.32
SOX2-OT-257ENST00000630553 TSPYL6Q8N831 410 aa13.05□□□□□ -0.32
SOX2-OT-257ENST00000630553 DUOX1Q9NRD9 1551 aa13.05□□□□□ -0.32
SOX2-OT-257ENST00000630553 BRCA2P51587 3418 aa13.05□□□□□ -0.32
SOX2-OT-257ENST00000630553 TWISTNBQ3B726 338 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-257ENST00000630553 CELF1Q92879 486 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms