RNA–Protein interactions for RNA: ENST00000629913.2

TREX1-206, Transcript of three prime repair exonuclease 1, humanhuman

APPRIS P1 BASIC

Gene TREX1, Length 945 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-206ENST00000629913 GREM2Q9H772 168 aa17.46■□□□□ 0.39
TREX1-206ENST00000629913 DBNDD1Q9H9R9 158 aa17.46■□□□□ 0.39
TREX1-206ENST00000629913 ADARB2Q9NS39 739 aaKnown RBP17.46■□□□□ 0.39
TREX1-206ENST00000629913 UFL1O94874 794 aa17.45■□□□□ 0.38
TREX1-206ENST00000629913 ANKIB1Q9P2G1 1089 aa17.45■□□□□ 0.38
TREX1-206ENST00000629913 GGA1Q9UJY5 639 aa17.45■□□□□ 0.38
TREX1-206ENST00000629913 TMEM88BA6NKF7 163 aa17.44■□□□□ 0.38
TREX1-206ENST00000629913 F6X3S4 739 aa17.44■□□□□ 0.38
TREX1-206ENST00000629913 ECE2O60344 883 aa17.44■□□□□ 0.38
TREX1-206ENST00000629913 BCL2L13Q9BXK5 485 aa17.44■□□□□ 0.38
TREX1-206ENST00000629913 XDHP47989 1333 aa17.44■□□□□ 0.38
TREX1-206ENST00000629913 PSMD14O00487 310 aa17.43■□□□□ 0.38
TREX1-206ENST00000629913 DOK7Q18PE1 504 aa17.43■□□□□ 0.38
TREX1-206ENST00000629913 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
TREX1-206ENST00000629913 ZC3H12CQ9C0D7 883 aaKnown RBP17.43■□□□□ 0.38
TREX1-206ENST00000629913 BSDC1Q9NW68 430 aaPredicted RBP17.43■□□□□ 0.38
TREX1-206ENST00000629913 SPEF2Q9C093 1822 aa17.42■□□□□ 0.38
TREX1-206ENST00000629913 CNTNAP1P78357 1384 aa17.42■□□□□ 0.38
TREX1-206ENST00000629913 FAM161AQ3B820 660 aa17.42■□□□□ 0.38
TREX1-206ENST00000629913 MKRN1Q9UHC7 482 aaKnown RBP17.42■□□□□ 0.38
TREX1-206ENST00000629913 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
TREX1-206ENST00000629913 SCN9AQ15858 1988 aa17.42■□□□□ 0.38
TREX1-206ENST00000629913 SHTN1A0MZ66 631 aa17.41■□□□□ 0.38
TREX1-206ENST00000629913 E9PSI1 815 aa17.41■□□□□ 0.38
TREX1-206ENST00000629913 CSF1RP07333 972 aa17.41■□□□□ 0.38
TREX1-206ENST00000629913 ATP2B4P23634 1241 aa17.41■□□□□ 0.38
TREX1-206ENST00000629913 MICALL2Q8IY33 904 aa17.41■□□□□ 0.38
TREX1-206ENST00000629913 DPF2Q92785 391 aa17.41■□□□□ 0.38
TREX1-206ENST00000629913 KCNQ5Q9NR82 932 aa17.41■□□□□ 0.38
TREX1-206ENST00000629913 CNOT7Q9UIV1 285 aaKnown RBP17.41■□□□□ 0.38
TREX1-206ENST00000629913 MINPP1Q9UNW1 487 aa17.41■□□□□ 0.38
TREX1-206ENST00000629913 ITGA6P23229 1130 aa17.4■□□□□ 0.38
TREX1-206ENST00000629913 RPS12P25398 132 aaKnown RBP17.4■□□□□ 0.38
TREX1-206ENST00000629913 TRPM4Q8TD43 1214 aa17.4■□□□□ 0.38
TREX1-206ENST00000629913 PGAP2Q9UHJ9 254 aa17.4■□□□□ 0.38
TREX1-206ENST00000629913 MED23Q9ULK4 1368 aa17.4■□□□□ 0.38
TREX1-206ENST00000629913 ZNF609O15014 1411 aa17.39■□□□□ 0.38
TREX1-206ENST00000629913 H7C1D1 291 aa17.39■□□□□ 0.37
TREX1-206ENST00000629913 CCER2I3L3R5 266 aa17.39■□□□□ 0.37
TREX1-206ENST00000629913 IGHMBP2P38935 993 aaKnown RBP17.39■□□□□ 0.37
TREX1-206ENST00000629913 HIRAP54198 1017 aaPredicted RBP17.39■□□□□ 0.37
TREX1-206ENST00000629913 ZC3H15Q8WU90 426 aaKnown RBP17.39■□□□□ 0.37
TREX1-206ENST00000629913 WTIPA6NIX2 430 aaPredicted RBP17.38■□□□□ 0.37
TREX1-206ENST00000629913 TRAF5O00463 557 aa17.38■□□□□ 0.37
TREX1-206ENST00000629913 VIL1P09327 827 aaKnown RBP17.38■□□□□ 0.37
TREX1-206ENST00000629913 FOXO4P98177 505 aa17.38■□□□□ 0.37
TREX1-206ENST00000629913 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
TREX1-206ENST00000629913 SLFN5Q08AF3 891 aa17.38■□□□□ 0.37
TREX1-206ENST00000629913 PSME4Q14997 1843 aa17.37■□□□□ 0.37
TREX1-206ENST00000629913 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
TREX1-206ENST00000629913 G3V3G9 751 aa17.37■□□□□ 0.37
TREX1-206ENST00000629913 GRM8O00222 908 aa17.37■□□□□ 0.37
TREX1-206ENST00000629913 CCT4P50991 539 aaKnown RBP17.37■□□□□ 0.37
TREX1-206ENST00000629913 DCAF8Q5TAQ9 597 aa17.37■□□□□ 0.37
TREX1-206ENST00000629913 ALDH1L1O75891 902 aa17.36■□□□□ 0.37
TREX1-206ENST00000629913 HSPA1AP0DMV8 641 aaKnown RBP17.36■□□□□ 0.37
TREX1-206ENST00000629913 HSPA1BP0DMV9 641 aaKnown RBP17.36■□□□□ 0.37
TREX1-206ENST00000629913 SAMD7Q7Z3H4 446 aa17.36■□□□□ 0.37
TREX1-206ENST00000629913 MRPL50Q8N5N7 158 aaKnown RBP17.36■□□□□ 0.37
TREX1-206ENST00000629913 MPHOSPH8Q99549 860 aa17.36■□□□□ 0.37
TREX1-206ENST00000629913 TRPM7Q96QT4 1865 aa17.35■□□□□ 0.37
TREX1-206ENST00000629913 ANKRD18BA2A2Z9 1011 aa17.35■□□□□ 0.37
TREX1-206ENST00000629913 EGFRP00533 1210 aa17.35■□□□□ 0.37
TREX1-206ENST00000629913 VEGFBP49765 207 aa17.35■□□□□ 0.37
TREX1-206ENST00000629913 CST9Q5W186 159 aa17.35■□□□□ 0.37
TREX1-206ENST00000629913 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
TREX1-206ENST00000629913 PODNQ7Z5L7 613 aa17.35■□□□□ 0.37
TREX1-206ENST00000629913 GLIS2Q9BZE0 524 aaPredicted RBP17.35■□□□□ 0.37
TREX1-206ENST00000629913 SRCIN1Q9C0H9 1055 aa17.35■□□□□ 0.37
TREX1-206ENST00000629913 ABT1Q9ULW3 272 aaKnown RBP17.35■□□□□ 0.37
TREX1-206ENST00000629913 LEMD3Q9Y2U8 911 aa17.35■□□□□ 0.37
TREX1-206ENST00000629913 IFIT5Q13325 482 aaKnown RBP17.34■□□□□ 0.37
TREX1-206ENST00000629913 TBC1D10BQ4KMP7 808 aaPredicted RBP17.34■□□□□ 0.37
TREX1-206ENST00000629913 EPHA10Q5JZY3 1008 aa17.34■□□□□ 0.37
TREX1-206ENST00000629913 RSBN1LQ6PCB5 846 aaPredicted RBP17.34■□□□□ 0.37
TREX1-206ENST00000629913 SSH1Q8WYL5 1049 aa17.34■□□□□ 0.37
TREX1-206ENST00000629913 CDCA7LQ96GN5 454 aa17.34■□□□□ 0.37
TREX1-206ENST00000629913 ANKRD2Q9GZV1 360 aa17.34■□□□□ 0.37
TREX1-206ENST00000629913 C9orf78Q9NZ63 289 aaPredicted RBP17.34■□□□□ 0.37
TREX1-206ENST00000629913 ZNF804BA4D1E1 1349 aa17.33■□□□□ 0.36
TREX1-206ENST00000629913 PTPRCP08575 1304 aa17.33■□□□□ 0.36
TREX1-206ENST00000629913 CHRNDQ07001 517 aa17.33■□□□□ 0.36
TREX1-206ENST00000629913 DEFB115Q30KQ5 88 aa17.33■□□□□ 0.36
TREX1-206ENST00000629913 LMBR1LQ6UX01 489 aa17.33■□□□□ 0.36
TREX1-206ENST00000629913 CDC37L1Q7L3B6 337 aa17.33■□□□□ 0.36
TREX1-206ENST00000629913 TRMT2AQ8IZ69 625 aaKnown RBP17.33■□□□□ 0.36
TREX1-206ENST00000629913 AGBL3Q8NEM8 1001 aa17.33■□□□□ 0.36
TREX1-206ENST00000629913 ZNF646O15015 1829 aaPredicted RBP17.33■□□□□ 0.36
TREX1-206ENST00000629913 A0A1B0GUL6 1792 aa17.33■□□□□ 0.36
TREX1-206ENST00000629913 USP17L3A6NCW0 530 aa17.32■□□□□ 0.36
TREX1-206ENST00000629913 USP17L4A6NCW7 530 aa17.32■□□□□ 0.36
TREX1-206ENST00000629913 KLRK1P26718 216 aa17.32■□□□□ 0.36
TREX1-206ENST00000629913 ZNF280AP59817 542 aaPredicted RBP17.32■□□□□ 0.36
TREX1-206ENST00000629913 KIF4BQ2VIQ3 1234 aa17.32■□□□□ 0.36
TREX1-206ENST00000629913 USP17L1Q7RTZ2 530 aa17.32■□□□□ 0.36
TREX1-206ENST00000629913 TXNRD3Q86VQ6 643 aa17.32■□□□□ 0.36
TREX1-206ENST00000629913 GMLQ99445 158 aa17.32■□□□□ 0.36
TREX1-206ENST00000629913 COA1Q9GZY4 146 aa17.32■□□□□ 0.36
TREX1-206ENST00000629913 CHMP3Q9Y3E7 222 aa17.32■□□□□ 0.36
TREX1-206ENST00000629913 THSD7BQ9C0I4 1608 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms